Mus musculus (house mouse): 12834
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Entry
12834 CDS
T01002
Symbol
Col6a2, Col6a-2
Name
(RefSeq) collagen, type VI, alpha 2
KO
K06238
collagen type VI alpha
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04151
PI3K-Akt signaling pathway
mmu04510
Focal adhesion
mmu04512
ECM-receptor interaction
mmu04820
Cytoskeleton in muscle cells
mmu04974
Protein digestion and absorption
mmu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
12834 (Col6a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
12834 (Col6a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
12834 (Col6a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
12834 (Col6a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
12834 (Col6a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
12834 (Col6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmu04147
]
12834 (Col6a2)
00536 Glycosaminoglycan binding proteins [BR:
mmu00536
]
12834 (Col6a2)
Exosome [BR:
mmu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
12834 (Col6a2)
Glycosaminoglycan binding proteins [BR:
mmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
12834 (Col6a2)
Hyaluronan
Extracellular matrix or blood plasma proteins
12834 (Col6a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Ins134_P3_kin_N
Motif
Other DBs
NCBI-GeneID:
12834
NCBI-ProteinID:
NP_666119
MGI:
88460
Ensembl:
ENSMUSG00000020241
UniProt:
Q02788
LinkDB
All DBs
Position
10:complement(76431590..76459464)
Genome browser
AA seq
1034 aa
AA seq
DB search
MTTIKMLQGPLSVLLIGGLLGVLHAQQQEAISPQEQEAVSPDISTTERNNNCPEKADCPV
NVYFVLDTSESVAMQSPTDSLLYHMQQFVPQFISQLQNEFYLDQVALSWRYGGLHFSDQV
EVFSPPGSDRASFTKSLQGIRSFRRGTFTDCALANMTQQIRQHVGKGVVNFAVVITDGHV
TGSPCGGIKMQAERAREEGIRLFAVAPNRNLNEQGLRDIANSPHELYRNNYATMRPDSTE
IDQDTINRIIKVMKHEAYGECYKVSCLEIPGPHGPKGYRGQKGAKGNMGEPGEPGQKGRQ
GDPGIEGPIGFPGPKGVPGFKGEKGEFGSDGRKGAPGLAGKNGTDGQKGKLGRIGPPGCK
GDPGSRGPDGYPGEAGSPGERGDQGAKGDSGRPGRRGPPGDPGDKGSKGYQGNNGAPGSP
GVKGGKGGPGPRGPKGEPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEVGSKGAK
GDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGTPG
EKGEPGPPGPEGGRGDFGLKGTPGRKGDKGEPADPGPPGEPGPRGPRGIPGPEGEPGPPG
DPGLTECDVMTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRL
GAIAKDPKSETGTRVGVVQYSHEGTFEAIRLDDERVNSLSSFKEAVKNLEWIAGGTWTPS
ALKFAYNQLIKESRRQKTRVFAVVITDGRHDPRDDDLNLRALCDRDVTVTAIGIGDMFHE
THESENLYSIACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPELPCQTELYVA
QCTQRPVDIVFLLDGSERLGEQNFHKVRRFVEDVSRRLTLARRDDDPLNARMALLQYGSQ
NQQQVAFPLTYNVTTIHEALERATYLNSFSHVGTGIVHAINNVVRGARGGARRHAELSFV
FLTDGVTGNDSLEESVHSMRKQNVVPTVVAVGGDVDMDVLTKISLGDRAAIFREKDFDSL
AQPSFFDRFIRWIC
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgactactatcaagatgctccagggtcctctttctgtgctcctgattgggggactcttg
ggggtcctccatgcccagcagcaggaagccatctcaccccaggagcaggaagctgtctca
ccagacatctccaccactgaaaggaacaacaattgtccagagaaggccgactgcccagtc
aacgtgtatttcgtgttggacacctcagagagcgtggccatgcagtccccgacagacagc
ctgctctatcatatgcagcagttcgtaccgcagtttatcagccagctgcagaacgagttc
tacctggaccaggtggccctgagctggcgctacggtggtctacacttctcggaccaagtg
gaggtgttcagcccaccgggcagtgaccgggcctccttcactaagagcctacaaggcatc
cgctccttccgcaggggcaccttcactgactgtgcattggctaacatgacgcagcagatc
cggcagcacgtaggcaagggggtggtcaacttcgccgtggtcatcactgacggccacgtc
acgggcagtccgtgtgggggcatcaagatgcaggctgagcgtgcccgtgaagagggcatc
cggctcttcgctgtggcccctaacaggaacctaaacgaacaaggcctgagggacatcgct
aactctccacatgagctctaccgtaacaactacgccaccatgcgacccgactctaccgag
attgaccaggacaccatcaaccgcatcatcaaggtcatgaaacatgaagcctatggagag
tgctacaaggtgagctgcctggagattcctggaccccacggacccaagggttaccgagga
cagaagggtgccaagggcaacatgggtgaaccaggagagcctggacagaaaggacgacag
ggagaccccggcatcgaaggccccattggattcccgggaccgaagggtgtgcctggcttc
aagggagagaagggtgaatttggatcggatggtcggaagggagcgcctggcctagctggc
aagaatggaacagatggacagaagggcaaactgggccgcattgggcctcctggttgcaag
ggagaccccggaagtcggggccccgatggataccctggagaagctggaagcccaggcgag
cgaggagaccagggtgccaagggggactctggccgcccaggacgcaggggaccaccagga
gatcctggagacaaaggaagcaagggatatcaaggcaacaacggagcccctggaagcccg
ggagtgaaaggaggcaagggagggcctggcccccgtggaccaaaaggagagcctggacgc
agaggagaccccgggaccaagggcggccccggcagcgatggtccaaagggagagaaggga
gaccctggtcctgaggggcctcgaggcctggctggagaagttggcagtaaaggagccaag
ggagacagaggtttgcctggacccagaggcccccagggggctcttggagagccaggaaag
cagggatctcgaggagaccctggtgacgccggacctcgaggggattcaggacagccgggc
cccaagggcgatcctggaaggcctggattcagctacccgggacctcgagggacacccggt
gaaaaaggcgagcccggtccaccaggccctgagggaggccgaggagactttggtctgaaa
ggaacacccggacggaagggagataaaggggagccagctgatcctggtccccctggtgaa
cctggccctcgggggccaagaggaatcccaggacctgagggagaacccggccctccagga
gaccctggtctcacggaatgtgatgtcatgacctatgtgagggagacctgtggatgctgc
gactgtgagaagcgctgtggtgccctggatgtggtcttcgtcatcgacagttctgagagt
attggctacaccaacttcaccttggagaagaactttgtcatcaatgtggtcaacaggcta
ggtgccattgccaaggaccccaagtcagaaacaggcacacgtgtgggtgtggtgcagtac
agccacgagggcacctttgaggccatccggctggacgacgagcgagtcaactccctgtct
agtttcaaggaggctgtcaaaaaccttgaatggatcgccggtggcacttggacgccctct
gccctcaagtttgcctataatcagctcatcaaagaaagccggcgccagaagacccgggtg
ttcgcagtggtcatcacggatgggcgccatgacccccgagatgatgacctcaatcttcgg
gcactgtgtgaccgagatgtcactgtgacagccattggcatcggtgacatgttccacgag
actcatgagagtgagaacctctactccattgcctgtgacaagccacagcaagtgcgcaac
atgacgctgttctctgacctggtggccgagaagttcatcgatgacatggaagacgtcctt
tgtccagacccccagatcgtgtgtccagaacttccctgccaaacagagctctatgtggcc
cagtgcacacaacggcccgtggacattgtcttcctgctggatggctcggagcggctgggc
gagcagaacttccacaaggtgcggcgcttcgtggaggacgtgtcccggcgcctgactctg
gcccggagggatgatgacccactcaacgcccgcatggctctgttgcaatatggcagccag
aatcagcaacaggtggccttcccactgacctacaacgtgaccaccatccacgaggccctg
gagagggccacctacctcaattccttttctcacgtgggcacgggcatcgtacacgccatc
aacaacgtggtgcggggggcacggggtggggcgcggcgccacgcagagctctccttcgtc
ttcctcacggacggtgtcaccggcaatgacagcctggaggagtcagtgcactctatgcgt
aagcagaacgtggtgcccactgtggtcgctgtgggcggcgacgtggacatggatgtgctt
actaagatcagcctgggtgacagggcggccatcttccgggagaaagactttgacagtctg
gcccagcccagcttctttgacaggttcatccgctggatctgttag
DBGET
integrated database retrieval system
