Mus musculus (house mouse): 12842
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Entry
12842 CDS
T01002
Symbol
Col1a1, Col1a-1, Cola-1, Cola1, Mov-13, Mov13
Name
(RefSeq) collagen, type I, alpha 1
KO
K06236
collagen type I alpha
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04151
PI3K-Akt signaling pathway
mmu04510
Focal adhesion
mmu04512
ECM-receptor interaction
mmu04611
Platelet activation
mmu04820
Cytoskeleton in muscle cells
mmu04926
Relaxin signaling pathway
mmu04933
AGE-RAGE signaling pathway in diabetic complications
mmu04974
Protein digestion and absorption
mmu05146
Amoebiasis
mmu05165
Human papillomavirus infection
mmu05205
Proteoglycans in cancer
mmu05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
12842 (Col1a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
12842 (Col1a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
12842 (Col1a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
12842 (Col1a1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
12842 (Col1a1)
09152 Endocrine system
04926 Relaxin signaling pathway
12842 (Col1a1)
09154 Digestive system
04974 Protein digestion and absorption
12842 (Col1a1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
12842 (Col1a1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
12842 (Col1a1)
09174 Infectious disease: parasitic
05146 Amoebiasis
12842 (Col1a1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
12842 (Col1a1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
12842 (Col1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmu00536
]
12842 (Col1a1)
Glycosaminoglycan binding proteins [BR:
mmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
12842 (Col1a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
12842
NCBI-ProteinID:
NP_031768
MGI:
88467
Ensembl:
ENSMUSG00000001506
UniProt:
P11087
LinkDB
All DBs
Position
11:94827050..94843868
Genome browser
AA seq
1453 aa
AA seq
DB search
MFSFVDLRLLLLLGATALLTHGQEDIPEVSCIHNGLRVPNGETWKPEVCLICICHNGTAV
CDDVQCNEELDCPNPQRREGECCAFCPEEYVSPNSEDVGVEGPKGDPGPQGPRGPVGPPG
RDGIPGQPGLPGPPGPPGPPGPPGLGGNFASQMSYGYDEKSAGVSVPGPMGPSGPRGLPG
PPGAPGPQGFQGPPGEPGEPGGSGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQG
ARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERG
RPGPPGTAGARGNDGAVGAAGPPGPTGPTGPPGFPGAVGAKGEAGPQGARGSEGPQGVRG
EPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKG
NSGEPGAPGNKGDTGAKGEPGATGVQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPG
SRGFPGADGVAGPKGPSGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDG
KTGPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGTAGEPGKAGERGLPGPPGAVGPAG
KDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG
PSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQGMPG
ERGAAGLPGPKGDRGDAGPKGADGSPGKDGARGLTGPIGPPGPAGAPGDKGEAGPSGPPG
PTGARGAPGDRGEAGPPGPAGFAGPPGADGQPGAKGEPGDTGVKGDAGPPGPAGPAGPPG
PIGNVGAPGPKGPRGAAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRG
ETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERG
FPGLPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGAPG
AKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPAGARGPAGPQG
PRGDKGETGEQGDRGIKGHRGFSGLQGPPGSPGSPGEQGPSGASGPAGPRGPPGSAGSPG
KDGLNGLPGPIGPPGPRGRTGDSGPAGPPGPPGPPGPPGPPSGGYDFSFLPQPPQEKSQD
GGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKS
GEYWIDPNQGCNLDAIKVYCNMETGQTCVFPTQPSVPQKNWYISPNPKEKKHVWFGESMT
DGFPFEYGSEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLLQ
GSNEIELRGEGNSRFTYSTLVDGCTSHTGTWGKTVIEYKTTKTSRLPIIDVAPLDIGAPD
QEFGLDIGPACFV
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttaggggccactgccctcctgacg
catggccaagaagacatccctgaagtcagctgcatacacaatggcctaagggtccccaat
ggtgagacgtggaaacccgaggtatgcttgatctgtatctgccacaatggcacggctgtg
tgcgatgacgtgcaatgcaatgaagaactggactgtcccaacccccaaagacgggagggc
gagtgctgtgctttctgcccggaagaatacgtatcaccaaactcagaagatgtaggagtc
gagggacccaagggagaccctggcccccaaggcccaaggggacccgttggcccccctgga
cgagatggcatccctggacagcctggacttcctggtcctcctggtccccctgggcccccc
ggaccccctggccttggaggaaactttgcttcccagatgtcctatggctatgatgaaaaa
tcagctggagtttccgtgcctggccccatgggtccttctggtcctcgtggtctccctggc
ccccctggtgcacctggtccacaaggtttccaaggcccccctggtgaacctggcgagcct
ggcggttcaggtccaatgggtccccgaggtccccctggccctcctggcaagaatggagat
gatggggaagctggcaagcccggccgtcctggtgagcgtggacctcctggacctcagggt
gctcgtggattgcctggaacagctggcctccctggaatgaagggacaccgaggcttcagt
ggtttggatggtgccaaaggagatgctggtcctgctggtcctaagggagagcccggcagt
cctggtgaaaacggagctcctggccagatgggtccccgaggtctgcccggtgagagaggt
cgccctggacctcctggcactgctggtgctcgcggtaacgatggtgctgttggtgctgct
ggaccccctggtcccaccggccccactggccctcctggcttccctggtgcagttggtgct
aagggtgaagctggtccccaaggagctagaggctctgaaggtccccagggtgtgcgtggt
gagcccggaccccctggccctgctggtgctgccggccctgctggaaaccctggtgctgat
ggacaacctggcgctaaaggtgccaatggtgctcctggtattgctggtgctcctggcttc
cctggtgcccgaggcccctctggaccccagggccccagcggccctccaggtcccaagggt
aacagtggtgaacctggtgctcctggcaacaaaggagacactggtgccaaaggagaaccc
ggtgctactggagttcaaggtcccccaggccctgccggagaagaaggaaaacgaggagcc
cgtggtgagcctggaccttccggactgcctggacctcctggcgagcgtggtggacctggt
agccgtggtttccctggtgctgatggtgttgctggccccaagggtccttccggtgaacgt
ggtgctcccggacctgctggtcccaaaggttctcctggtgaagctggtcgccccggtgaa
gctggtctccctggtgccaagggtctcactggcagtcctggcagccctggtcctgatggc
aaaaccggcccccctggtcccgctggtcaagatggtcgccctggacccgcaggtcctcct
ggagcccgtggccaggctggtgtgatgggattccctggacctaagggtaccgctggagaa
cctggaaaggctggagagcgaggccttcccggaccccctggcgctgttggtcctgctggc
aaagatggagaagctggagctcagggagcccctggccctgctggtcctgctggtgagaga
ggtgaacaaggtcccgctggctcccctggattccagggtcttcctggtcctgccggtcct
cctggtgaagcaggcaagcctggtgaacagggtgttcctggagaccttggtgcccctgga
ccctctggcgcaagaggcgagagaggtttccctggtgaacgtggtgtacaaggtccccca
ggtcctgctggtccccgaggaaacaatggtgcccccggcaacgatggtgccaagggtgat
actggtgcccccggagctcccggtagccagggtgcccccggtcttcagggaatgcctggt
gaacgtggtgcagctggtcttccaggtcctaagggtgacagaggtgatgctggtcccaaa
ggtgctgatggttctcctggtaaagatggtgcccgtggtctgactggtcccattggtcct
cctggccctgctggtgcccctggtgacaagggtgaagctggtcccagtggtcctcccggt
cccaccggagcccgtggtgctcccggagaccgtggtgaggctggtccccctggtcctgct
ggctttgccggcccccctggtgctgatggccaacctggtgcgaaaggtgaacctggtgat
actggtgttaaaggtgatgctggtcctcctggccctgctggtcctgctggaccccccggc
cccattggtaacgttggtgctcctggacccaaaggtcctcgtggtgctgctggtccccct
ggtgctactggcttccctggtgctgctggccgtgtcggtccccctggtccctctggaaat
gctggaccccctggccctcccggtcccgttggcaaagaagggggcaaaggtccccgtggt
gagactggccctgctggacgtcctggtgaagttggtcccccaggtccccccggtcctgct
ggtgagaaaggatctcctggtgctgatggacctgctggctctcctggtacccctggacct
cagggtattgctggacaacgtggtgtggtcggtcttcccggtcagagaggagaaagaggc
ttccctggtcttcctggcccctctggtgaacctggcaaacaaggtccttctggatcaagt
ggtgaacgcggtccccctggccccatggggccccctggattggctggtccccctggtgaa
tctggacgtgagggatcccctggtgctgaaggctcccctggaagggatggtgctcccggg
gccaagggtgaccgtggtgagactggccccgctggcccccctggtgcccctggtgctccc
ggtgctcccggccctgttggtcccgctggcaagaatggcgatcgtggtgagactggtcct
gctggtcctgctggtcccattggccctgctggtgcccgtggccctgctggaccccaaggc
ccccgtggtgacaagggtgagacaggcgaacaaggtgacagaggcataaagggtcatcgt
ggcttctctggtctccagggtcctcctggttctcctggttctcctggtgaacaaggcccc
tctggagcttcaggtcctgcaggcccccggggtccccctggctctgctggttctcctggc
aaagacggactcaacggtctccctggccccattggtccccctggtcctcgaggtcgcact
ggtgacagcggccctgctggtccccccggccctcctggaccccctggccctcctggacct
cccagtggcggttatgacttcagcttcctgcctcagccacctcaagagaagtctcaagat
ggtggccgctactaccgggccgatgatgctaacgtggttcgtgaccgtgaccttgaggtg
gacaccaccctcaagagcctgagtcagcagattgagaacatccgcagccccgaaggcagc
cgcaagaaccctgcccgcacatgccgcgacctcaagatgtgccactctgactggaagagc
ggagagtactggatcgaccctaaccaaggctgcaacctggacgccatcaaggtctactgc
aacatggagacaggtcagacctgtgtgttccctactcagccgtctgtgcctcagaagaac
tggtacatcagcccgaaccccaaggaaaagaagcacgtctggtttggagagagcatgacc
gatggattcccgttcgagtacggaagcgagggctccgaccccgccgatgtcgctatccag
ctgaccttcctgcgcctaatgtccaccgaggcctcccagaacatcacctatcactgcaag
aacagcgtagcctacatggaccagcagactggcaacctcaagaaggccctgctcctccag
ggatccaacgagatcgagctcagaggcgaaggcaacagtcgcttcacctacagcaccctt
gtggacggctgcacgagtcacaccggaacttggggcaagacagtcatcgaatacaaaacc
accaagacctcccgcctgcccatcatcgatgtggctcccttggacattggtgccccagac
caggaattcggactagacattggccctgcctgcttcgtgtaa
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