Mus musculus (house mouse): 13004
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Entry
13004 CDS
T01002
Symbol
Ncan, C230035B04, Cspg3, Cspg3-rs, Tgfbit
Name
(RefSeq) neurocan
KO
K06794
neurocan core protein
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mmu00535
]
13004 (Ncan)
00536 Glycosaminoglycan binding proteins [BR:
mmu00536
]
13004 (Ncan)
04091 Lectins [BR:
mmu04091
]
13004 (Ncan)
Proteoglycans [BR:
mmu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
13004 (Ncan)
Glycosaminoglycan binding proteins [BR:
mmu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
13004 (Ncan)
Lectins [BR:
mmu04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
13004 (Ncan)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
EGF_2
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
13004
NCBI-ProteinID:
NP_031815
MGI:
104694
Ensembl:
ENSMUSG00000002341
UniProt:
P55066
A0A0R4IZX5
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All DBs
Position
8:complement(70545735..70573494)
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AA seq
1268 aa
AA seq
DB search
MGAGSVWASGLLLLWLLLLVAGDQDTQDTTATEKGLRMLKSGSGPVRAALAELVALPCFF
TLQPRLSSLRDIPRIKWTKVQTASGQRQDLPILVAKDNVVRVAKGWQGRVSLPAYPRHRA
NATLLLGPLRASDSGLYRCQVVKGIEDEQDLVTLEVTGVVFHYRAARDRYALTFAEAQEA
CRLSSATIAAPRHLQAAFEDGFDNCDAGWLSDRTVRYPITQSRPGCYGDRSSLPGVRSYG
RRDPQELYDVYCFARELGGEVFYVGPARRLTLAGARAQCQRQGAALASVGQLHLAWHEGL
DQCDPGWLADGSVRYPIQTPRRRCGGPAPGVRTVYRFANRTGFPAPGARFDAYCFRAHHH
TAQHGDSEIPSSGDEGEIVSAEGPPGRELKPSLGEQEVIAPDFQEPLMSSGEGEPPDLTW
TQAPEETLGSTPGGPTLASWPSSEKWLFTGAPSSMGVSSPSDMGVDMEATTPLGTQVAPT
PTMRRGRFKGLNGRHFQQQGPEDQLPEVAEPSAQPPTLGATANHMRPSAATEASESDQSH
SPWAILTNEVDEPGAGSLGSRSLPESLMWSPSLISPSVPSTDSTPSAKPGAAEAPSVKSA
IPHLPRLPSEPPAPSPGPSEALSAVSLQASSADGSPDFPIVAMLRAPKLWLLPRSTLVPN
MTPVPLSPASPLPSWVPEEQAVRPVSLGAEDLETPFQTTIAAPVEASHRSPDADSIEIEG
TSSMRATKHPISGPWASLDSSNVTMNPVPSDAGILGTESGVLDLPGSPTSGGQATVEKVL
ATWLPLPGQGLDPGSQSTPMEAHGVAVSMEPTVALEGGATEGPMEATREVVPSTADATWE
SESRSAISSTHIAVTMARAQGMPTLTSTSSEGHPEPKGQMVAQESLEPLNTLPSHPWSSL
VVPMDEVASVSSGEPTGLWDIPSTLIPVSLGLDESDLNVVAESPSVKGFWEEVASGQEDP
TDPCENNPCLHGGTCHTNGTVYGCSCDQGYAGENCEIDIDDCLCSPCENGGTCIDEVNGF
ICLCLPSYGGSLCEKDTEGCDRGWHKFQGHCYRYFAHRRAWEDAERDCRRRAGHLTSVHS
PEEHKFINSFGHENSWIGLNDRTVERDFQWTDNTGLQYENWREKQPDNFFAGGEDCVVMV
AHESGRWNDVPCNYNLPYVCKKGTVLCGPPPAVENASLVGVRKIKYNVHATVRYQCDEGF
SQHRVATIRCRNNGKWDRPQIMCIKPRRSHRMRRHHHHPHRHHKPRKEHRKHKRHPAEDW
EKDEGDFC
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgggggccggatctgtgtgggcctcaggcctcctgctgctgtggctgcttctcctagtg
gctggggatcaggacacacaggacaccaccgccacggaaaaggggcttcgcatgctgaag
tcagggtcaggacccgtccgtgctgccctggcagagctagtggccctgccctgcttcttt
accctgcaaccacggctaagctccctgcgagacattcctcggatcaagtggactaaggtt
cagactgcatcaggccagcgacaggatttgccaatcttggtggccaaagacaacgtggtg
cgtgtggccaagggctggcagggacgggtgtcattgcctgcttatccccggcacagagcc
aatgctacccttctgctggggccacttcgagcaagcgactctgggctgtatcgctgccaa
gtggtaaagggtatcgaagatgagcaggacctggtaaccctggaagtgacaggcgtcgtg
ttccattatcgggcggcccgggaccgctatgcgctgaccttcgctgaggcccaggaggct
tgtcgcctaagctctgctaccatcgctgccccacggcacctgcaggctgcctttgaagat
ggctttgacaactgcgacgcgggctggctctcagaccgcacggttcggtacccgatcact
cagtcgcgtcctggttgctatggtgaccgcagcagtctcccgggtgttcggagctacggg
agacgcgacccgcaggaactctacgatgtctactgctttgcccgcgagctagggggtgaa
gtcttttacgtgggcccggcccgccgactgaccctggcgggcgcgcgggcacaatgtcag
cggcagggtgcagcgctggcctcggtggggcagttgcacctggcctggcacgagggcctg
gaccagtgcgacccgggctggctggcagacggcagcgtgcgctaccccatccagactccg
cgccggcgttgcgggggccccgccccaggtgtgcgcactgtgtaccgcttcgccaaccgc
accggctttcctgcgccaggagcacgcttcgacgcctactgcttccgagctcatcaccat
acagcacaacatggagattctgagatcccctcatctggagatgagggggagattgtgtca
gcagaggggcctccaggccgagaactaaagcccagcttgggggaacaggaggtgatagca
cctgacttccaggaacctctcatgtccagtggagaaggcgaacccccagacttgacttgg
acacaagcacctgaggagacccttggttctactccagggggtcccacgctggcctcatgg
ccctcttcagaaaagtggctctttacgggtgccccaagctccatgggtgtctccagtccc
agcgacatgggagtagatatggaagcgacaacacccttgggcacacaggtagcacccacc
cccacgatgaggaggggccgctttaaagggttgaatggtcgacacttccagcagcagggc
ccagaagaccagctgcctgaggtagcagagcccagtgcccagcctcccaccctgggagct
actgccaaccacatgaggccttctgcagccacagaggcttcagagagtgaccagagccac
agtccttgggccattctgaccaacgaagtggatgagccaggagcaggctctcttggcagc
aggagtctcccagagtccctgatgtggtccccgtcgttgatctcacccagtgtcccaagc
accgacagtactcctagcgcgaagccaggggcagccgaggcacccagtgtgaagtcagcc
atcccccacctgccccggctgccctcagagccccctgctccctctcccgggccctcagag
gccctaagtgctgtctccctccaggcatcctctgctgatggctcccctgacttccccatt
gtagccatgcttcgagcccccaaactgtggcttctgccacgctctacacttgtccccaat
atgaccccagtcccactgtccccagcttctccacttccctcctgggtcccagaagaacag
gctgtcaggcctgtcagccttggagcggaagacctcgaaaccccatttcagaccaccata
gctgccccagttgaagccagccacagatcccctgatgcagattctatagaaatcgagggg
accagctccatgcgggctacaaagcaccccatctctggcccatgggcttctttggactct
agtaatgtgacgatgaatcctgtcccttctgatgctggcatcctagggactgagtctggg
gtcttggacttaccagggagtcccacatcaggcggacaggccactgtggagaaggtgctg
gccacctggctaccactgcctggccaaggactagaccctggctcccagtccacacccatg
gaagcccatggggttgccgtgagcatggaacctacagtggctttggagggaggtgccacc
gagggccctatggaggccaccagggaggtggtccccagcactgctgatgccacttgggag
tctgaatccagaagtgccatttctagcacccacatagctgtgaccatggctagggctcag
ggcatgcccacactgacctctacaagctccgaaggccacccagagcctaagggccagatg
gtggcccaggagtcactggagcctctcaacactctgccttcgcacccctggtcatccctg
gtggtccccatggatgaagtggcctcagtttcctcaggggaacccacaggactgtgggac
atacccagcactctgatacctgtatccttgggcttggatgaatcagacctgaatgttgtg
gctgagagtccaagcgtgaagggcttctgggaagaggtggccagcgggcaggaagatccc
acagatccctgcgagaacaacccctgcctgcatgggggcacctgccacaccaacggcacc
gtgtatggctgtagttgtgaccagggctatgctggggagaattgtgaaattgacattgat
gactgcttatgcagcccttgcgagaatgggggcacctgcatcgacgaggtgaatggtttc
atctgcctctgcctccccagctatgggggcagcctgtgtgagaaggacacagaaggctgc
gaccgtggctggcacaaattccagggacactgctaccggtactttgcccatcgccgggcc
tgggaggatgcagagagagattgcaggcgccgagctggtcacctgacaagcgtccattcg
ccagaagagcacaagttcattaacagttttggacatgagaattcgtggatcggcctgaat
gaccggacagtagagagggacttccagtggacagacaacacaggactgcaatatgagaac
tggagggagaagcagccggataatttcttcgcaggtggggaggattgtgtggtgatggtg
gcacatgagagtgggcgctggaatgatgtcccctgcaactacaacctaccctatgtctgc
aagaagggtacagtgctgtgtggtccccctccagcagtggagaatgcctctcttgttggt
gtgcgcaagatcaagtacaatgtccatgccactgtgcgataccagtgtgatgaaggattc
tcccagcaccgagtggccactatccgctgccgtaacaatgggaagtgggaccggcctcag
atcatgtgcatcaaacccaggcggtcacatcggatgcgtagacaccaccaccatccacac
cgacatcacaagcctcgcaaggagcacagaaaacacaagagacacccagcggaagactgg
gagaaagacgaaggggatttctgctaa
DBGET
integrated database retrieval system