Mus musculus (house mouse): 13006
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Entry
13006 CDS
T01002
Symbol
Smc3, Bamacan, Cspg6, HCAP, Mmip1, SMC-3, SmcD
Name
(RefSeq) structural maintenance of chromosomes 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04110
Cell cycle
mmu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
13006 (Smc3)
04114 Oocyte meiosis
13006 (Smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
13006 (Smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mmu00535
]
13006 (Smc3)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
13006 (Smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
13006 (Smc3)
Proteoglycans [BR:
mmu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
13006 (Smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
13006
NCBI-ProteinID:
NP_031816
MGI:
1339795
Ensembl:
ENSMUSG00000024974
UniProt:
Q9CW03
Q1HL32
Q3TMK9
Structure
PDB
PDBj
LinkDB
All DBs
Position
19:53588827..53634262
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgatcatccagggcttccgaagttaccgagaccaaacaattgta
gatcccttcagctccaaacataatgtcatcgtgggcagaaatggctctggaaaaagcaac
ttcttttatgcaatccagtttgttctcagtgatgaattcagccatcttcgtccagagcag
cgattggctttgttgcatgagggtacaggtcctcgtgttatttctgcttttgtggaaatc
atttttgacaattcggacaaccggttaccaattgataaagaggaagtttcacttcgaaga
gttattggtgccaaaaaggatcagtatttcctagataagaagatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctgggttttccagaagtaatccttattacattgttaaa
caaggaaagatcaaccaaatggcaacggcaccagattctcagagattaaagctgttgaga
gaagtagctggtactagagtgtatgatgaacggaaagaagaaagcatctccctgatgaaa
gaaacagagggcaaacgggaaaagatcaatgagttgttgaagtacattgaagagcgcctg
cacactctagaggaggagaaggaggagctggcccagtatcagaagtgggataagatgagg
cgcgccctggagtacaccatctacaaccaggagctcaacgagacgcgcgctaagctcgac
gagctttctgctaagcgagaaacgagtggagagaaatccagacaactaagggatgcccag
caggatgcaagagacaaaatggaggatattgagcgccaggttagagaactgaaaacaaaa
atttcagccatgaaagaagaaaaagaacagcttagtgctgaaagacaagagcagattaag
caaaggaccaagttggagcttaaagccaaggatttacaagatgagctggcgggcaacagt
gaacagcggaaacgtttattaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagcgtaaaagaaaaagaagagcga
ggaattgcgaggttggctcaagctacacaggaaagaactgatctttatgcaaagcagggt
cgaggaagccagtttacgtcaaaagaagaaagggataaatggattaaaaaggaactgaag
tctttagatcaggcaattaatgataagaaaagacagattgctgctattcacaaggatttg
gaggataccgaggcaaataaagagaaaaatctggagcaatataataaattggatcaggat
ctcaatgaagtcaaagctcgagttgaagaactggacagaaaatattatgaagtaaaaaat
aagaaagatgaactacaaagtgaaagaaattacttgtggagagaggagaatgcagaacaa
caagcacttgctgctaaaagagaagaccttgagaagaagcagcaacttcttagagcggca
acaggaaaggccattttaaatggaatagatagcattaacaaagtgctagaacattttcgg
cgaaaaggtataaaccagcatgttcaaaatggctaccatggcatcgtaatgaataacttt
gagtgtgaaccagctttctatacttgtgtggaagtcactgctggtaacaggttattttat
cacattgttgattcagatgaagtcagcacgaaaattttaatggagttcaataaaatgaat
cttcctggagaggtgactttcctgcctcttaacaagttagatgtgagagatactgcctat
cctgaaactaacgatgctattcctatgatcagtaagctgaggtacaatcccagatttgac
aaagctttcaaacatgtatttggaaagacactcatctgtcggagcatggaagtttcaact
cagctggcccgggccttcactatggactgtattactttggaaggtgatcaagtcagccat
cgaggtgctctgactggaggttattacgacacaagaaagtctcgacttgagttacagaaa
gacgttaggaaggcagaggaggagctgggtgagctggaggctaagctcaatgaaaaccta
cgcaggaacattgaaaggattaataatgaaattgaccagttgatgaaccaaatgcagcag
atagagacccaacaaagaaaatttaaagcatccagagatagcatattatcagagatgaag
atgctaaaagagaagagacagcaatcagaaaagaccttcatgccaaagcaacgtagctta
caaagcttggaggcaagtctgcatgctatggagtccaccagagagtcactgaaagcggag
ctaggaacggatttgctttctcaactcagtctggaagatcagaaaagagtcgacgctctg
aatgatgaaatccgtcagctgcagcaggaaaacagacagctgctaaatgaaagaattaaa
ctagaaggcattattactcgagtagagacttacctgaatgagaatctgaggaaacgcttg
gaccaagtagaacaggaacttaatgaactgagagagacagaaggtggtactgttcttact
gccacaacatcagaacttgaagctattaataaaagagtaaaagatactatggcaagatca
gaagatttggacaattccattgacaaaacagaagctggaattaaagagctccagaaaagt
atggagcgctggaaaaatatggagaaagaacacatggatgccataaatcatgatactaaa
gagctggagaagatgaccaaccggcaaggcatgctgttgaagaagaaggaggagtgtatg
aagaagatccgggagctggggtccctcccccaggaagcgtttgagaagtaccagacactg
agcctgaagcagttgtttcgaaaactggagcaatgcaacacagagttaaagaagtacagc
cacgtgaacaaaaaggctctagatcagtttgtgaatttctctgagcagaaggaaaagctg
ataaagcggcaagaggaattggatagaggctacaaatcaatcatggaattgatgaatgta
cttgaacttagaaaatatgaagctattcagttaactttcaaacaggtatctaagaacttc
agtgaagttttccagaagttggtacctggtggcaaagcgactttggtgatgaagaaagga
gatgtggagggcagccagtctcaggacgaaggagaagggagtggcgagagtgagcggggc
tctgggtcacagagcagtgttccatcagttgaccagttcacaggagttgggatcagggtg
tcatttacagggaagcaaggggagatgagagaaatgcagcagctctcaggaggacagaaa
tctctggtagcccttgctctcatctttgccattcagaaatgcgaccctgctcctttttac
ctgtttgatgagatcgaccaagctttggatgctcagcacagaaaagccgtgtcagatatg
attatggagctagccgtgcatgcccagtttattaccactactttcaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggttagtcacattgatgtg
atcacagcagagatggccaaagattttgtagaagacgataccacgcatggttaa
DBGET
integrated database retrieval system
