Mus musculus (house mouse): 13209
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Entry
13209 CDS
T01002
Symbol
Ddx6, 1110001P04Rik, C430015D01Rik, E230023J21Rik, HLR2, mRCK/P54, p54, rck
Name
(RefSeq) DEAD-box helicase 6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
13209 (Ddx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
13209 (Ddx6)
03036 Chromosome and associated proteins [BR:
mmu03036
]
13209 (Ddx6)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
13209 (Ddx6)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
13209 (Ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
13209 (Ddx6)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
13209 (Ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
13209
NCBI-ProteinID:
NP_001104296
MGI:
104976
Ensembl:
ENSMUSG00000032097
UniProt:
P54823
LinkDB
All DBs
Position
9:44514113..44552028
Genome browser
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKASAGPGGGGTQPQPQLNQLKNTSTINNGTPQQAQ
SMAATIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPAED
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttatcatgggtctgtccagtcagaacggccag
ctgaggggccctgtgaaggccagtgctggccctggaggagggggcacacagccacagcca
cagctgaaccagttgaagaacaccagcacaatcaataatggcactccacagcaagcccag
agcatggccgccactattaaacctggtgatgactggaaaaagacattaaaactccctcca
aaggatctaagaatcaaaacttcggatgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgagagttgctaatgggaatttttgaaatgggctgggaaaaaccatct
cctatccaggaggagagcattcccattgctttatctggtagggatatcttagctagagca
aaaaatggaacaggcaaaagcggtgcctacctcatccccttacttgaaaggctggacctg
aagaaggacaatattcaagcaatggtgattgttcccactagagaacttgctctacaggtc
agtcagatttgcatccaggtcagcaaacacatgggaggggccaaagtgatggcaaccacc
ggaggaaccaatttacgagatgacataatgaggcttgatgatacagtgcatgtggtgatc
gctacccctggcaggatcctggatctcatcaagaaaggcgtggcaaaggttgaccatgtc
cagatgatagtgctagatgaggcagataaattgttgtcacaggattttgtgcagataatg
gaggatattattctcacactacctaaaaataggcagattttactatactccgctactttc
cctcttagtgtacaaaagtttatgaattcccatctgcaaaaaccctacgagataaacctg
atggaggaactaactctgaaaggagtaactcagtactacgcatatgtaacggagcgccaa
aaagtgcactgcctcaatacacttttctccaggcttcagataaaccagtccatcattttc
tgcaactcctcccagagagtcgagctactcgccaagaagatttctcagctgggctactct
tgcttttatatccatgctaaaatgaggcaggaacatcgaaatcgtgtctttcatgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatata
caagctgtgaatgtggtaataaactttgacttcccaaagctggcagagacctatcttcat
cgtattggaagatcaggtcgctttggtcatcttggcttagccatcaacttgatcacttat
gatgatcgcttcaacctgaagagtattgaggagcagctggggacagagatcaaacccatc
ccaagcaacatcgacaagagcctgtatgtggcagaataccacagtgagcctgcagaagac
gagaaaccgtaa
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