Mus musculus (house mouse): 15289
Help
Entry
15289 CDS
T01002
Symbol
Hmgb1, HMG-1, Hmg1, SBP-1, p30
Name
(RefSeq) high mobility group box 1
KO
K10802
high mobility group protein B1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03410
Base excision repair
mmu04140
Autophagy - animal
mmu04217
Necroptosis
mmu04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
15289 (Hmgb1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
15289 (Hmgb1)
09143 Cell growth and death
04217 Necroptosis
15289 (Hmgb1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
15289 (Hmgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
15289 (Hmgb1)
03400 DNA repair and recombination proteins [BR:
mmu03400
]
15289 (Hmgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmu04147
]
15289 (Hmgb1)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
15289 (Hmgb1)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
15289 (Hmgb1)
MMR (mismatch excision repair)
Other MMR factors
15289 (Hmgb1)
Exosome [BR:
mmu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
15289 (Hmgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
15289
NCBI-ProteinID:
NP_001300823
MGI:
96113
Ensembl:
ENSMUSG00000066551
UniProt:
P63158
Q58EV5
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:complement(148983512..148989867)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaaaaagccgagaggcaaaatgtcctcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag
ttctccaagaagtgctcagagaggtggaagaccatgtctgctaaagaaaaggggaaattt
gaagatatggcaaaggctgacaaggctcgttatgaaagagaaatgaaaacctacatcccc
cccaaaggggagaccaaaaagaagttcaaggaccccaatgcacccaagaggcctccttcg
gccttcttcttgttctgttctgagtaccgccccaaaatcaaaggcgagcatcctggctta
tccattggtgatgttgcaaagaaactaggagagatgtggaacaacactgcagcagatgac
aagcagccctatgagaagaaagctgccaagctgaaggagaagtatgagaaggatattgct
gcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggtcaaggctgaaaag
agcaagaaaaagaaggaagaggaagatgatgaggaggatgaagaggatgaggaagaggag
gaagaagaggaagacgaagatgaagaagaagatgatgatgatgaataa
DBGET
integrated database retrieval system
