Mus musculus (house mouse): 16873
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Entry
16873 CDS
T01002
Symbol
Lhx5, Lim2
Name
(RefSeq) LIM homeobox protein 5
KO
K18493
LIM homeobox protein 5
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
16873 (Lhx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
16873 (Lhx5)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
16873 (Lhx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
16873
NCBI-ProteinID:
NP_032525
MGI:
107792
Ensembl:
ENSMUSG00000029595
UniProt:
P61375
Q543P4
LinkDB
All DBs
Position
5:120569951..120579522
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHGADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgctggctgtgagcggcccatcctcgaccgctttctgctgaacgta
ctagaccgcgcgtggcatatcaaatgtgttcaatgctgcgagtgcaaaaccaacctctcg
gagaagtgcttctcacgggaaggcaagctatactgtaaaaacgactttttcaggcgcttt
ggcacaaagtgcgccggctgcgcgcaaggtatctctccgagcgacctggtacggaaggcc
cggagcaaagtcttccacctcaactgcttcacctgtatggtgtgcaataagcagctatcc
accggagaggagctctacgtgatcgacgagaacaagtttgtgtgcaaggacgactactta
agctcctctagcctcaaggaaggaagtctcaactcggtgtcgtcctgtacggaccgcagt
ttgtccccggacctccaggatccgttacaggacgaccccaaagagaccgacaattcgacc
tcatcggacaaggaaaccgctaacaacgagaatgaggaacagaactccggcaccaaacgg
cgcggcccgcgcaccaccatcaaggccaagcagctggagacgctcaaggcagccttcgca
gccacgcccaagcccacgcgccacattcgcgaacagctggcacaggagacgggcctcaac
atgagggtcattcaggtgtggtttcagaaccgaaggtccaaagaacgccgcatgaaacag
ctgagcgctctgggcgcgcggagacacgccttcttccggagtccgcggcgcatgcgtccc
ctgggcggccgcttggacgagtctgagatgttggggtctaccccatacacttattacgga
gactaccaaagtgactactacgctccgggaggcaattacgatttcttcgcgcacggtccg
ccgtcacaggcgcagtcccctgccgactccagcttcctggcagcatcgggacctggctcg
acgccgctgggcgcgctggaaccgccgctggccgggcctcacggcgcggacaaccccaga
ttcaccgacatgatctcgcatccggacacgccgagccccgagccgggcctgcccggtgcg
ctgcaccccatgccgggagaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcaccagcggctacagtggacccctgtcgcaccccaaccctgagctcaacgaagcggcc
gtatggtaa
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