Mus musculus (house mouse): 16882
Help
Entry
16882 CDS
T01002
Symbol
Lig3, D11Wsu78e
Name
(RefSeq) ligase III, DNA, ATP-dependent
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
16882 (Lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmu03400
]
16882 (Lig3)
Enzymes [BR:
mmu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
16882 (Lig3)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
16882 (Lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
16882
NCBI-ProteinID:
NP_001278174
MGI:
109152
Ensembl:
ENSMUSG00000020697
UniProt:
Q80ZH7
LinkDB
All DBs
Position
11:82671977..82695100
Genome browser
AA seq
1012 aa
AA seq
DB search
MTLAFKILFPRNLCALGRKELCLFPEQNRWAAISQFSQWSETNLLGGCCLLQRRKPVLAL
QRGHLRPRATHLTFWPGSHVGLCTGPCAMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQ
HIADLSSKAAATPKKKAAVQAKLTTTGQVTSPVKGASFITSTNPRKFSGFSAAKPNNSEQ
APSSPAPGTSLSASKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIHDFLQKGSTGDG
FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRIFF
EQSKSFPPAAKSLLTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALRVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHKV
AHFKDYIPKAFPGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRVIREGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
DSQKWCTVTKCAGGHDDATLARLQKELVMVKISKDPSKIPSWLKINKIYYPDFIVPDPKK
AAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKDKADF
AVVAGDEASPTTGGSSGENEGTAGSAGPCKGPPSKSSASAKTTEQKLNSPSSRGGIKPIP
KHSPMKPGEKLAVKSSPVKVGMKRKATDETPCLKKVLLDVFTGVRLYLPPSTPDFKRLKR
YFVAFDGDLVQEFDMGSATHVLGNREKNTDAQLVSSEWIWACIRKRRLIAPC
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcctcttcccgagaaacctttgtgcccttggcagaaaagaa
ctgtgcctgttcccagaacagaatcgctgggctgccataagtcagttcagccagtggtcg
gaaacaaatctcctcggtgggtgctgccttctccagagaagaaagcctgtcctagctctc
cagagaggtcatctaagaccacgtgccacccaccttactttctggccagggtcgcatgtg
ggactctgtactggcccctgtgcgatggcagagcagcggttctgtgtggactatgccaag
cggggcacagctggatgcaagaaatgcaaggagaagattgtaaagggcgtgtgccgcatt
ggcaaagtggtgcccaaccccttctcagagtctgggggtgatatgaaagagtggtaccac
attaagtgcatgtttgagaaactggaacgggctcgggccaccacaaagaaaattgaagac
ctcacagagctggaaggctgggaagagctggaagataacgaaaaggaacagataagccag
catattgcagacctgtcttctaaggcagctgccacacctaagaagaaagctgctgtccag
gctaagctgacaaccactggccaggtgacatctccagtgaaaggtgcttcgtttattacc
agtaccaatcctcggaagttctctggcttttcagcagcaaaacccaacaactctgagcaa
gccccctcaagccctgctcctggaacgagtctgtctgcaagtaaatgtgaccctaagcac
aaagattgtctgctacgagagttccggaagctgtgcgccatggtggctgaaaatcctagc
tataacaccaagacccagatcatccatgacttcttgcagaaaggctccacaggagatggc
tttcacggtgatgtgtacctgacagttaagctgctgctgcctggtgtcatcaagagtgtt
tacaacttgaatgataagcagattgtaaaactttttagccgaatttttaactgcaaccca
gatgatatggcccgggacctagaacagggtgacgtgtcagagacgatcagaatcttcttt
gagcagagcaagtctttccccccagctgccaaaagcctcctcaccattcaggaagtggat
gccttcctcctgcacctctccaagctcaccaaagaggatgagcagcagcaggccctgcag
gacatagcctcccggtgtacagccaatgaccttaagtgcattattcggctgatcaaacat
gatctgaagatgaactcgggtgcaaaacacgtgttagatgcccttgaccccaatgcttat
gaagccttcaaagcatcgcgcaacctgcaggatgtggtggagcgagtccttcacaatgag
caggaggtggagaaggacccaggccggcgacgggctctgagggtccaggcctcactgatg
acgcctgtgcagcccatgctggctgaggcctgcaaatccattgaatatgcaatgaagaag
tgtcccaatggcatgttctctgagatcaagtacgatggtgagcgagtccaggtgcataag
aagggggaccacttcagctacttcagccgcagtctcaagcctgtcctgcctcacaaggtg
gcccacttcaaggactatatacccaaagcttttcctgggggtcaaagcatgatcttggat
tccgaggtactcctgattgacaacaacacaggcaaaccactgccctttgggactctggga
gtgcacaagaaagctgctttccaggatgctaatgtctgcctgtttgtttttgattgtatc
tactttaatgatgtcagcttgatggacaggcctctctgtgagcgacggaagtttcttcat
gacaacatggttgaaatccgtaaccggatcatgttctcagaaatgaagcaagtcacaaaa
gcttcagacctggctgacatgataaaccgggtgatccgagagggcttggaagggttggtg
ctaaaggatgtgaagggtacatatgagcctgggaagcggcactggctgaaagttaagaaa
gattatttgaatgagggggccatggctgatacagctgatctggtggttcttggggccttc
tatgggcaagggagcaaaggcggaatgatgtccatcttcctcatgggctgctatgaccct
gacagccaaaagtggtgcactgttacaaaatgtgctggaggccatgatgatgccacactt
gcccgcctgcagaaagagctggttatggtgaagatcagcaaggatcctagtaagataccc
agctggctgaagatcaacaagatctattatcctgactttatcgtcccagacccaaagaaa
gctgctgtgtgggagatcacaggggcagaattctccagatctgaggcacacactgctgat
ggcatctccatccgatttcctcgatgcacccgaatccgggacgacaaggactggaaatct
gccactaacctcccccaactcaaggaactgtaccagctgtccaaagacaaggcagacttt
gctgtggtggctggagatgaggcaagccccactactggaggcagcagtggcgagaacgag
ggcactgctgggtctgctgggccctgcaagggcccccccagtaagtcctctgccagtgcc
aagaccaccgaacagaagctcaatagccccagtagcagaggtggcatcaaaccgattcca
aagcattcccccatgaaaccaggagagaagctggctgtgaagtcttctccagtcaaagtg
ggaatgaagaggaaagctactgatgagaccccatgcctgaaaaaggtactgttggatgtc
ttcactggggtgcggctctacttgccaccttctacaccagacttcaaacgtctcaaacgc
tactttgtggcattcgacggggacctggtacaggaatttgacatgggctcagccacacat
gtgctaggtaacagggaaaagaacactgatgcccagttggtctcctcagagtggatttgg
gcatgtatccggaaacggaggctgatagctccctgctag
DBGET
integrated database retrieval system
