Mus musculus (house mouse): 170791
Help
Entry
170791 CDS
T01002
Symbol
Rbm39, 1500012C14Rik, 2310040E03Rik, B330012G18Rik, Rnpc2, caper
Name
(RefSeq) RNA binding motif protein 39
KO
K13091
RNA-binding protein 23/39
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
170791 (Rbm39)
Spliceosome [BR:
mmu03041
]
Common components
Common spliceosomal components
General mRNP proteins
170791 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
170791
NCBI-ProteinID:
NP_573505
MGI:
2157953
Ensembl:
ENSMUSG00000027620
UniProt:
Q8VH51
Structure
PDB
PDBj
LinkDB
All DBs
Position
2:complement(155989159..156022649)
Genome browser
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagccatgcttgaggccccttacaagaaggatgagaac
aagttgaacagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgtagtcatgagagaaaaagaagcaaaagtaaagaacggaaaagaagtagagat
agagaaaggaaaaagagcaaaagtcgagagcggaaacgaagtagaagcaaagaaaggaga
cgaagccgctcacgcagtcgggatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattggattgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccatttaggaaagacaagagccctgtgagggaa
cctattgataatctcactcctgaggaaagggatgcaaggactgttttctgcatgcaactg
gcagcaagaattcgaccgagagatttggaagagtttttctctacagttggaaaggttcga
gatgtgagaatgatttctgatagaaattcaagacgttccaaaggaattgcatatgtggaa
tttgttgatgtcagttcagtgcctctagcaattggattaactggccaacgagttttagga
gtgccaatcatagttcaggcatcacaggcagaaaaaaacagagctgctgcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctctatgtaggctcattacactttaac
ataactgaagacatgcttcgggggatctttgaaccttttggaaggattgaaagtattcag
ctcatgatggatagtgaaactggccgatctaagggatatggatttattacattttctgac
tcagaatgtgccaaaaaggctttggaacaactgaatggatttgagttagctgggagacca
atgaaagttggtcacgttactgaacgaactgatgcttcgagtgctagttcatttttggac
agtgacgaactagaaaggactggaattgacttgggaacaactggacgtcttcagttaatg
gcaagacttgcggagggtaccggtttgcagattccacctgccgcacaacaagcattacaa
atgagtggctctctggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagaccgaagcctcagctttagctgcagctgcgtctgttcaacct
cttgcaacacagtgtttccaactttctaacatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtcattgaagaatgtaataaacatggaggagtc
attcatatttatgttgataaaaattcagctcagggcaatgtgtatgtgaagtgcccatct
attgctgcggctattgctgctgtcaatgcattgcatggcagatggtttgctggtaaaatg
ataacagcagcgtatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
DBGET
integrated database retrieval system
