Mus musculus (house mouse): 18141
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Entry
18141 CDS
T01002
Symbol
Nup50, 1700030K07Rik, Npap60
Name
(RefSeq) nucleoporin 50
KO
K14295
nuclear pore complex protein Nup50
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18141 (Nup50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
18141 (Nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
18141 (Nup50)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18141 (Nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
18141
NCBI-ProteinID:
NP_057923
MGI:
1351502
Ensembl:
ENSMUSG00000016619
UniProt:
Q9JIH2
Structure
PDB
PDBj
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All DBs
Position
15:84800100..84827164
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AA seq
466 aa
AA seq
DB search
MAKRVAEKELTDRNWDEEDEVEEMGTFSVASEEVMKNRAVKKAKRRNVGFESDSGGAFKG
FKGLVVPSGGGGFSGFGGSGGKPLEGLTNGNSTDNATPFSNVKTAAEPKAAFGSFAVNGP
TTLVDKKISSPKCNNSNQPPSSGPASSTACPGNAYHKQLAGLNCSVRDWIVKHVNTNPLC
DLTPIFKDYERYLATIEKQLENGGGSSSESQTDRATAGMEPPSLFGSTKLQQESPFSFHG
NKAEDTSEKVEFTAEKKSDAAQGATSASFSFGKKIESSALGSLSSGSLTGFSFSAGSSSL
FGKDAAQSKAASSLFSAKASESPAGGGSSECRDGEEEENDEPPKVVVTEVKEEDAFYSKK
CKLFYKKDNEFKEKGVGTLHLKPTATQKTQLLVRADTNLGNILLNVLIAPNMPCTRTGKN
NVLIVCVPNPPLDEKQPTLPATMLIRVKTSEDADELHKILLEKKDA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagagagttgcggagaaggagttgactgacaggaactgggatgaggaagacgaa
gttgaagagatgggaacattctcagtggccagtgaggaagtcatgaagaacagagccgta
aagaaggcaaagcgcagaaacgttggatttgaatctgatagcggaggagcctttaaaggt
ttcaaaggtttggttgtgccttctggaggaggagggttttctggatttggtggctctgga
ggaaagcctctggaaggactgacaaatggaaacagcacagacaatgccacgcccttctcc
aatgtaaagacagcagcagagcccaaggcagcctttggttcttttgctgtgaatggccct
actaccttggtggataaaaagatttcaagtcccaaatgcaataacagcaatcagccgccc
tcctccggccctgcttccagtaccgcctgccctgggaatgcctatcacaagcagctggct
ggcttgaactgctccgtccgcgattggatagtgaagcacgtgaacacaaacccgctttgt
gacctgactcccatttttaaagactatgagagatacttggcgacgatcgagaagcagctt
gagaatggaggcggcagcagttctgagagccagacagacagggcgacggctggaatggag
cctccttccctttttggttcaacaaaactacagcaagagtcaccattttcatttcatggc
aacaaagcggaggacacatctgaaaaggtggagtttacagcagaaaagaaatcggacgca
gcacaaggagcaacaagtgcctcgtttagtttcggcaagaaaattgagagctcggctttg
ggctcgttaagctctggctccctaactgggttttcattctctgctggaagctccagcttg
tttggtaaagatgctgcccagagtaaagcagcctcttcgctgttctctgctaaagcatcc
gagagtccggcaggaggcggcagcagcgagtgcagagatggtgaagaagaggagaatgac
gagccacccaaggtagtggtgaccgaagtaaaggaagaggatgctttctactccaaaaaa
tgtaaactattttacaagaaagacaacgaatttaaagagaagggtgtggggaccctgcat
ttaaaacccacagcaactcagaagacccagctcttggtgcgggcagacaccaacctaggc
aacatactgctgaatgttctgatcgcccccaacatgccgtgcacccggacaggaaagaac
aacgtccttatcgtctgtgtccccaaccccccactcgatgagaagcagcccactctcccg
gccaccatgctgatccgggtgaagacgagcgaggatgccgatgaattgcacaagatttta
ctggagaaaaaggatgcctga
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