Mus musculus (house mouse): 18142
Help
Entry
18142 CDS
T01002
Symbol
Npas1, MOP5, bHLHe11
Name
(RefSeq) neuronal PAS domain protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
18142 (Npas1)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
18142 (Npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
HLH
PAS_4
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
18142
NCBI-ProteinID:
NP_032744
MGI:
109205
Ensembl:
ENSMUSG00000001988
UniProt:
P97459
A2RSH6
Structure
PDB
PDBj
LinkDB
All DBs
Position
7:complement(16189643..16210741)
Genome browser
AA seq
594 aa
AA seq
DB search
MATPYPRSGGRGEVKCGGGRGAGVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARWRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGPPAGLA
PGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAASIGPPTPPSVSSSSSSSSSSLVDTPEIEASPTEASPA
FRAQERSFFVRMKSTLTKRGLNVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAELP
LHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDATRIRQSHLDLLD
KGQVVTGYYRWLQRAGGFVWLQSVATVAGNGKSTGEHHVLWVSHVLSNAEGSQTPLDAFQ
LPAIVSQEEPSRPGPEPTEEEPPVDGKQAVPADQDKDKDPQARGKRIKVEASPKEARGSE
DSGEEELSDPPAPPRPEFTSVIRAGALKHDPVLPWGLTTPGDPSPALLHAGFLPPVVRGL
CTPGTIRYGPAELSLMYPHLHRLGAGPSLPEAFYPTLGLPYPGPTGTRVQRKGD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccctatcccagaagcggtggccgaggtgaagtcaagtgcgggggcggccgt
ggagccggcgtcccctgggatttcctgcctgggctgatggtcaaggccccgcccggaccc
tgcctgcaggcgcagcgcaaagagaagtcccgcaacgctgcgcgctggcgacgcgggaag
gaaaatctggagttcttcgagctagccaagctgctccctctgcccggtgccatctccagc
cagctggacaaggcgtccatcgtgcgtcttagcgtcacctacctccgcctgcgtcgtttt
gccgcgctgggggcgccgccctgggggttgcgggccgtcgggcctccggctggcctcgcc
ccaggccgccgaggccctgtggctctggtctctgaagtcttcgagcaacacctaggtgga
cacatcctacagtccttggatggcttcgtgttcgctttgaaccaggaagggaaatttctc
tacatctcagagacagtgtccatctacctgggtctctcacaggtggagctgacgggcagc
agcgtcttcgactacatccatcctggggaccactcggaggtcctagagcaacttggattg
cgggctgcaagcatcggtccccctacaccaccttccgtgtcctcctcttcctcatcgtct
tcctcctcgctggtggacacccctgagattgaagccagccccaccgaggcatcgcctgcc
ttccgagcccaagagcggtccttctttgtccgcatgaagtccaccctcaccaagaggggc
ctgaatgtcaaagcctcggggtacaaggtcattcatgtgacagggcgcctgagggcccga
gccctgggtcttgtagcccttggacacacgctgcccccagccccactggctgagctgcct
ttgcacggacacatgattgtcttccgcctcagcctgggcctcaccatccttgcttgtgag
agcagagttagcgaccatatggacatggggccctcagagcttgtgggacgcagctgctac
cagtttgttcatggacaggatgcaaccaggatccgccaaagccatctggacctgctggac
aaagggcaggtggtgactggttactaccgttggctgcagcgtgcggggggcttcgtgtgg
ctgcagtctgtagccactgtggccgggaacgggaagagcactggggagcatcacgtgctg
tgggtcagtcacgtgctcagcaatgctgaaggtagtcaaacacccctggatgccttccag
cttccagctattgtgtctcaggaggagccatccaggccaggcccagagcccacagaggaa
gagcctccagttgacgggaagcaggctgtgcctgcggaccaggacaaggacaaggaccct
caggcccgaggcaaacgcatcaaagtggaggccagcccgaaggaagctagaggctcagag
gacagtggagaagaggagctctcggatccaccggctccacctcggccagaattcacttct
gtcatccgggcgggagccctgaagcatgatccagtgctgccgtggggcttgacaactccc
ggagacccctcacccgccctccttcatgcaggcttcctgccacccgttgtgcggggcctg
tgcaccccaggcaccatccgctatggccctgcggagttgagcctgatgtatccacatctg
cacaggctgggcgcaggcccctcgcttccagaggccttttaccctacgctgggcttgccc
tatccggggcccacaggtactagggtgcagcggaagggagactga
DBGET
integrated database retrieval system
