Mus musculus (house mouse): 18572
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Entry
18572 CDS
T01002
Symbol
Pdcd11, 1110021I22Rik, ALG-4, Pdcd7, mKIAA0185
Name
(RefSeq) programmed cell death 11
KO
K14792
rRNA biogenesis protein RRP5
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmu03009
]
18572 (Pdcd11)
Ribosome biogenesis [BR:
mmu03009
]
Eukaryotic type
90S particles
Other 90S particles
18572 (Pdcd11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
Spt6_S1
OB_RRP5_4th
OB_RRP5
Suf
TPR_14
TPR_19
ARM_TT21
ARM_TT21_N
TPR_6
TPR_CcmH_CycH
TPR_15
UTP6_C
TPR_12
DUF2110
DUF7017
ARM_TT21_5th
TPR_7
TPR_1
ARM_TT21_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
18572
NCBI-ProteinID:
NP_035183
MGI:
1341788
Ensembl:
ENSMUSG00000025047
UniProt:
Q6NS46
LinkDB
All DBs
Position
19:47079183..47119585
Genome browser
AA seq
1862 aa
AA seq
DB search
MANLEESFPRGGTRKLHKSEKSSQQVVEQDNLFDVSTEEGPIKRKKSQKGPAKTKKLKIE
KRKSIKSIKEKFEILSLESLCEGMRILGCVKEVSELELVVSLPNGLQGFVQVTEVCDAYT
QKLNEQVAQEEPLEDLLRLPELFSPGMLVRCVVSSLDVTESGKKSVKLSVNPKRVNKVLS
ADALRPGMLLTGTVSSLEDHGYLVDIGVGGTRAFLSLKKAQEYIRQKNKGAKFKVGQYLT
CVVEEVKSNGGVVSLSVEHSEVSSAFATEEQSWNLNNLLPGLLVKAQVQKVTQFGLQLNF
LTFFKGLVDFMHLEPKKMGSYSSNQTVKACILCVHPRTRVVRLSLRPIFLHPGRPLTRIS
YQQLGAVLDDVPVQGFFKNAGAIFRLKDGVLAYARVSHLSDSKKAFNAEAFKPGSTHKCR
IIDYSQMDELALLSLRKSIIAAPFLRYHDIKIGTVVKGTVLAIKPFGILVKVGEQIKGLV
PSMHLADIMMKNPEKKYSPGDEVKCRVLLCDPEAKKLIMTLKKTLVTSKLSLITCYEGAK
PGLQTHGVIIRVKDYGCIVKFYNDVQGLVPKHELSTQHIPDPETVFYTGQVVKVAVLSCE
PSKERMLLSFRLLSDSRPKDPGVESSQKKTGAVRIGQLVDVKVLEKTKTGLEVAILPHNT
PAFLPTPHLSDHAANGPLLHHWLQTGDTLHRVLCLSQSERHILLCRKPALVSTVEGGQDP
KSLSEIQPGMLLIGFVKCIKEYGVFVQFPSGLSGLSPKTIMSDKFVTTPSEHFVEGQTVV
AKVTNVDESKQRMLLSLRLSDCSLGDSASTSFLLLCQCLEELQGIRSLMSNQDSVLIQTL
ADMTPGMVLDAVVHEVLEDGSVVFSSDPVPDLVLRASRYHRAGQEVEPGQKKKVVVLHVD
MLKLEVHVSLHQDLVNRKTRKLRKSSRHQGIVQHLEESFAVASLVETGHLVAFSLISHLN
DTFHFDSEKLRVGQGVCLTLKTTEPGVTGLILAVEGPASKRTRMPVQRDSETVDDKGEEK
EEEEEEEEKEEENLTVKSKKRHSLAIGDKVTGTIKAVKATHVVVTLADGFVGCIHASRIL
DDVPVGTSPTTTLKAGKKVTARVIGGRDVKTSKFLPISHPRFVLTILELSVRPSELKGSY
SALNTHSESPVEKIRQYQAGQTVTCFFKKYNVMKKWLEVDIGPDIRGRIPLLLTSLSFKV
LKHPDKKFQVGQAIEATVVDPDVPRAFLCLSLIGPYRLEEGEVAMGRVMKVVPNRGLTVS
FPFGKIGKVSMFHLSDSYSEAPLEDFCPQKIVRCYILSTAHRVLALSLRSSRTNRETKNR
IEDPEINSIEDVKEGQLLRGYVKCVLPSSVIIGLGPSVLGLAKYSHVSECVPPEKELYNG
CLPEGKLVTAKVLRVNPMKNLIELSLLPSDTGRPDVFSPAPEPKQEERSGGAEEGQKRKE
KNQKRREEKEEPQKSQRGGRGKRERQESESEQELVNKRPKKSGAAEEDDSGVEVYYREGE
DEVGEPKLPPRGKQTKSTEVPRLHLSSGFLWDVGLDSLTPALPLREESSDSEDEQPHQAK
KKKGKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSPNSSILWLQYMAFH
LQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNE
PLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAVWIKYGAFVLGRSQAGASHRVLQ
RALECLPAKEHVDVIVKFAQLEFQLGDVERAKAIFENTLSTYPKRTDVWSVYIDMTIKHG
SQTAVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALEYVEAKSSAL
ED
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctggaggaaagcttcccccgaggggggacacggaaactccacaaatcagag
aagtcttcccagcaggtggttgaacaagacaacttatttgatgtttccacagaagaaggt
cccattaaaaggaaaaagagccagaaagggccagcaaaaacaaaaaaattgaaaattgaa
aagagaaaatccatcaaatctataaaagagaagtttgaaattcttagtcttgagtcccta
tgtgaggggatgcggattttgggctgtgtgaaggaggtgagtgagctggagctggtggtc
agccttcccaacggcctccaagggtttgtgcaagtgaccgaagtctgtgacgcctacact
cagaagctgaatgagcaggtggcacaagaagaacctctggaggacctgctccgcctgcct
gagctcttctcccctggaatgttggtgaggtgtgtggtgagcagcctggatgtcacagag
agtggcaagaagagcgtcaagctttctgtgaaccccaaacgtgtcaacaaagtgctgagt
gctgatgccctgaggcctggcatgctgctgacaggcacagtgtcaagcctggaagaccat
ggctacctagtggacattggcgttggtgggaccagagcttttctgtcacttaagaaggca
caagagtacatccggcagaagaacaaaggtgctaagttcaaagtcggccagtacctgacc
tgtgtggttgaagaggtgaaaagcaacggaggagttgtgagtctctctgtagagcactcc
gaggtttcctctgccttcgcaactgaggagcaaagctggaacctgaataacttactacca
gggctgctggtcaaagcccaggtgcagaaggtaactcagtttggactccagctaaatttc
cttacgttcttcaagggcctggttgacttcatgcatctggagcccaagaaaatgggatct
tattcttcaaatcaaacggtaaaagcctgcatcctctgcgtccatcctcgcaccagagtt
gtgcgactgagcctgcgccccatcttcctgcatcctgggcgtccactcacccgcatctct
taccagcagctaggggctgtgctagatgatgtccctgttcagggtttttttaagaatgcg
ggggccatcttcaggctgaaggatggggtactggcctacgcccgggtcagccatctctct
gattctaagaaagcattcaacgctgaggccttcaaaccggggagcactcacaagtgtaga
atcattgactacagccagatggatgagctggccttgctctctctgcggaaatcaattatt
gcagctccattccttagatatcatgacatcaaaatagggacagtagtaaagggcacagtg
ctggccataaagccatttgggatcctggtgaaggtgggtgagcagataaaaggcctggtg
ccctccatgcacctggctgacatcatgatgaagaacccagagaagaagtacagcccaggg
gatgaggtcaagtgcagggttttgctctgtgaccctgaagccaagaagctaattatgacc
ctgaaaaaaacccttgtcacatccaaactgtctctcatcacctgctatgagggtgccaag
cctggcctgcagacgcacggtgttatcatacgggtcaaggactatggctgcattgtgaag
ttctacaacgatgtgcaggggctagtgcctaagcatgagcttagcacccagcacatcccg
gacccagagacggtcttttacactggccaggtggtaaaggtggcagtgctgagctgtgag
ccttccaaggagaggatgctcctgtccttcagactgttgagtgactcgcggccaaaggat
ccgggtgttgagagcagtcagaagaaaacaggagctgtgcgcatcgggcagttggtggat
gtgaaggtcctggagaagaccaaaaccgggctggaggtggccatcctgccccataacacc
cctgctttcctccccacgccacacctgtccgaccacgctgccaatggcccactgttgcac
cactggctccagacaggtgacacccttcaccgagttctgtgtttgagccagagtgagaga
cacattcttctttgcaggaaaccagctttggtctccacagtagaaggtggccaggacccc
aagagcctctcagaaatccagcccggaatgttgctcattggttttgtgaagtgcatcaag
gagtatggcgtgttcgtccagttcccctcaggtctcagtggactgtcccccaaaactatc
atgagtgacaagttcgtaaccactccaagtgaacactttgtggagggtcagacagtcgtt
gctaaggtgaccaatgtggatgaatcgaagcagaggatgctgctgtctctgcggctgtca
gactgcagtctgggggattcggccagcaccagcttcctcctcctgtgccagtgcctggaa
gagctgcagggcattcgcagcctcatgagcaaccaagactctgtattgatccagacactt
gctgacatgaccccggggatggtccttgatgccgtggtccatgaggtgttagaagatggt
tcagtggtgttcagtagtgatcctgtgcctgacctggtcctgagagccagcagataccac
cgggcagggcaggaggtggagcctggacagaagaagaaggtcgtggttctacacgtggac
atgttgaagttggaggtccacgtctcccttcaccaggacttggtgaacaggaaaacgaga
aagctgagaaaaagcagtagacaccagggaatcgtacagcatctggaagagtcctttgcc
gtggcatccttggtggagactggccaccttgtggctttctctctgatctctcacctcaat
gataccttccactttgactctgagaagctgcgtgtggggcagggtgtctgccttaccctc
aagaccacagaaccgggagtgaccggtctgattttggctgtggaagggccagcttctaag
aggaccaggatgccagttcagagggattcagagacagttgatgacaaaggagaggagaaa
gaggaggaggaggaggaggaggagaaggaagaagagaacttgactgtgaagtctaagaaa
aggcatagcctggctattggggacaaagtcactgggaccattaaggctgtgaaggccaca
catgttgttgtaaccctagctgatggctttgttggctgtatccatgcctcccgcatctta
gatgatgtcccagtgggcacctcgcctacgaccacactgaaagccgggaagaaagtcact
gcgagagtgatcggtgggcgagatgtgaagacatctaagtttctcccaataagtcacccc
agatttgttctgaccatcctggagctgagtgttcggccaagtgagttgaagggtagctac
agtgctcttaatactcactctgagagccccgtggagaagatcaggcagtaccaggctggg
cagactgtgacctgcttcttcaagaagtacaacgtgatgaagaagtggcttgaagtggac
atcggaccggacatccgagggagaattcccttgttgctcacttccctcagcttcaaggtt
ctgaaacacccagacaagaagttccaggttgggcaggccatcgaggccaccgttgttgac
ccagacgtccccagggctttcttatgtctgtcactcataggaccttacagacttgaagaa
ggtgaagtggccatgggccgagtgatgaaggttgtacccaacaggggactgaccgtctcc
ttcccttttgggaagatagggaaagtcagtatgtttcacctgagcgactcgtactccgag
gcacccctggaggacttctgcccccagaagattgtcagatgttacatcctgtccacagca
caccgtgtgctggctttgtcactccggtcatccaggacaaacagagagacaaaaaacaga
atagaagatccagaaatcaactccattgaggacgtgaaggaagggcagctcctgcggggc
tatgtgaaatgtgtcctgccaagcagtgtgatcataggccttggaccttcagttctgggt
ttggccaagtattcacatgtctctgagtgtgtcccaccagagaaagagctttataacgga
tgcctccctgagggaaagctggtcactgccaaggtcctgcgcgtgaaccccatgaagaac
ctgatagagctgtcgctccttcccagcgacactgggaggccagacgtgttctctcctgct
ccagaaccaaaacaagaggagaggagcggaggggctgaggagggccagaaaaggaaagag
aagaaccagaagagacgggaggagaaggaagagccccagaagtcacagaggggtgggcga
ggcaagcgggagcgccaggagtctgagagcgagcaggaactagtgaacaagaggccaaag
aagtctggagccgcagaagaagacgacagtggtgtggaagtgtactaccgggaaggagag
gatgaggtgggggagccgaagctgccacccagggggaagcagacaaaatccacagaggtg
ccccggctgcatctctcttcaggcttcctttgggatgtggggcttgactctctgactcca
gccttgccactccgagaagagagctcagacagcgaggatgagcagccgcaccaagctaag
aagaagaagggcaagaaggagagggagctggagaagcagaaggcagagaaggagctgtcg
cgcattgaggaggcactcatggaccctgggcgacagccagagtctgcggatgactttgac
cggctggtgctaagctctcccaacagctccatcctttggctgcagtacatggctttccac
ctacaggccacggagatcgagaaggcccgggctgtggctgagagggccctgaagaccatc
tcattcagagaggagcaggagaagctgaacgtgtgggtggccctgctgaacctggaaaac
atgtacggctctcaggagtccctgactaaggtcttcgagcgagctgtgcagtacaacgag
cctctcaaggttttcctgcatctggctgacatctacaccaagtccgagaaatacaaggaa
gctggtgagctgtacaaccggatgctgaaacggttccggcaggagaaggctgtctggatc
aaatatggtgcctttgttttggggaggagtcaggctggggccagtcaccgagtgctgcag
cgagccctggagtgcctgcccgccaaggaacatgtggatgtgatcgtcaagtttgcccag
ctggagttccagctcggggacgtggagcgcgctaaagccatttttgaaaacacactgagc
acctaccccaaacgcacagacgtctggtcagtctacatcgacatgaccatcaagcacggc
agccagacagcagtcagggacatctttgagcgggtcattcacctgagcctggcgcctaag
aggatgaagttctttttcaagcgctacctggactatgagaagcagcacggcacggagaag
gacgtgcaggcggtcaaggccaaggccttggagtatgtggaggccaagagctcggcgctg
gaggactag
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integrated database retrieval system
