Mus musculus (house mouse): 18949
Help
Entry
18949 CDS
T01002
Symbol
Pnn, D12Ertd512e
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18949 (Pnn)
03015 mRNA surveillance pathway
18949 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
18949 (Pnn)
03041 Spliceosome [BR:
mmu03041
]
18949 (Pnn)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
18949 (Pnn)
Spliceosome [BR:
mmu03041
]
Complex C
Other components
EJC/TREX
18949 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
18949
NCBI-ProteinID:
NP_032917
MGI:
1100514
Ensembl:
ENSMUSG00000020994
UniProt:
O35691
Q3TUQ5
LinkDB
All DBs
Position
12:59113705..59120803
Genome browser
AA seq
726 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEVEEAGEEEEKEAGIVHSDAEKEQEEEEQKQ
EMEVKTEEEAEVREGEKQQDSQPEEVMDVLEMVESVKHVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFDVEPDKECKSLSPGKENINSQEVEKESEEKEEKEEKEPEPQPEPVAQPQ
PPPQPLPQSQPHSQPHSQPQPVLQSQPLCQPETLPLAVLQPPPQVIQEQGNLLPERKDFP
LESIKLPEVSVEPVLTVHSENKSKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSS
SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVD
RKRRDTSGLERSHKSSKGGSSRDTKGSKDKSSRPDRKRSISESSRSGKRSSRSERDRKSD
RKDKRR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgccgtgagagctttgcaggagcagctagagaaggccaaagagagcctcaag
aatgtggacgagaatatccgcaagctcaccgggcgggacccgaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgaggtagcttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacaaagagacctggaa
ggggcagtcagtaggctgggtggggagcgtcggacaagaagagaatcacgccaggagagc
gacccagaagacgatgatgttaaaaagccagcactgcaatcttccgttgtagctacctcc
aaagagcgcacgcgcagagaccttatccaggatcaaaacatggatgagaaggggaagcaa
aggaaccgacgaatatttggcttgttgatgggcactcttcagaaatttaaacaagaatct
actgttgctactgaacggcaaaaaagacgccaagaaattgaacaaaaacttgaagttcag
gctgaagaagagagaaagcaggttgaaaacgagaggcgagaactgtttgaggagagacgt
gctaagcagacggagctgcggcttctggagcagaaggttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaagataattaagtatataaggaccaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaagctaatagaagagtcacag
agaaagatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaagtagaggaggcaggagaggaagaggagaag
gaagcaggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaagcag
gaaatggaggttaagactgaggaggaggctgaggtaagagaaggtgagaagcagcaggat
agtcagccagaagaagtgatggatgtgctagagatggtggaaagtgtcaaacacgtaatt
gctgagcaggaagtaatggaaactaaccaagttgaaagtatagagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgatgttgagccagataaagaatgtaaa
tctctttctcctggaaaagagaatattaattctcaggaagtggaaaaggagtctgaggag
aaagaggaaaaagaagagaaagaacctgagccccaacctgagcctgtggctcagcctcag
cccccacctcagcccctgccccagagccagccccattctcagccccactcccagccccag
cctgtactccagtcccagcctctctgtcagcctgagactttgccattagctgttttgcag
cctccacctcaggttattcaggagcaagggaatctactacctgagcggaaggattttcct
ctagagtctataaaactccctgaggtgtctgtagagccagtcttgacagtacattcagaa
aacaaaagcaagaataagactaggagcaggagcagggggcgagcaaggaataaaacaagc
aagagtagaagtcggagcagcagcagcagtagttccagtagcagctctactagtagcagc
agcgggagcagctccagcagtggcagcagcagtagtcgaagcagctccagcagcagctcc
agcacgagtgggagcagcagcagagacagcagcagcagcactagcagtagcagtgagagt
aggagtcgcagtaggggccgaggacataaccgagataggaagcacagaaggagcgtggac
cggaagcgaagggatacttcaggactagaaagaagtcacaagtcttcaaaaggtggtagt
agtagagatacaaaaggatcaaaggataagagttcccgccctgacagaaaaaggtctata
tcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagac
aggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system