Mus musculus (house mouse): 192159
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Entry
192159 CDS
T01002
Symbol
Prpf8, D11Bwg0410e, DBF3/PRP8, Prp8, Sfprp8l
Name
(RefSeq) pre-mRNA processing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
192159 (Prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
192159 (Prpf8)
Spliceosome [BR:
mmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
192159 (Prpf8)
Complex C
U5 SnRNP specific factors
192159 (Prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
192159
NCBI-ProteinID:
NP_619600
MGI:
2179381
Ensembl:
ENSMUSG00000020850
UniProt:
Q99PV0
Q3UNG1
LinkDB
All DBs
Position
11:75377603..75400273
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTVTEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
SQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgtttccttaccgagggccgggtaacccggtgcccggccctctagccccg
ctgccggattatatgtcagaggagaagctgcaggagaaagctcgaaaatggcagcagttg
caggccaagcgatatgcagagaagcggaaatttgggtttgtggatgctcagaaggaagac
atgccaccagaacatgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
ttccgtcatgacaaaagggtctatttgggagctcttaagtacatgcctcatgcagtcctc
aagctccttgagaacatgcccatgccttgggagcagatccgggacgtgcctgtgctgtac
cacatcactggagccatctcctttgttaacgagattccctgggttatcgagccggtttac
atctcccagtgggggtcaatgtggatcatgatgcgtagagaaaaaagagacaggaggcat
ttcaagaggatgcgtttcccccctttcgatgacgaggaaccgcccctggattatgccgac
aacatcttagatgttgagccactggaagccattcagctagagctggacccagaggaggat
gcccctgtgttggactggttctatgaccaccagcctttgagagacagtaggaagtacgtt
aatggttccacctaccaacgctggcagttcacattgcctatgatgtccacactctaccga
ctggccaatcagcttctgactgaccttgtagatgacaactacttctatctctttgatctg
aaggccttttttacctctaaggcactcaacatggccattcctgggggacccaaatttgag
cctcttgttcgagacatcaacttacaggatgaagactggaatgaatttaacgatattaat
aagatcatcatccgtcagcctattcgtactgagtacaagattgcttttccttacctgtat
aacaaccttccacaccacgtccacctgacctggtaccacactcccaacgttgtgttcatc
aagactgaggatcctgatctgccagctttctactttgatcctttgatcaacccaatctcc
catagacactcagtcaagagccaagaaccactgcctgatgatgatgaagagtttgaactc
ccagagtttgtcgagcccttcctgaaggatacacctctctatacagacaacacagccaat
ggcattgccctgctctgggcaccacggcccttcaacctacgctctggtcgtacccgccgg
gccttggacataccccttgtcaagaactggtatcgggagcactgtcctgctgggcagcct
gtgaaggttcgagtctcttatcagaagctgcttaagtactatgtgctgaatgccctcaag
caccggcctcccaaagcccagaagaagaggtatctgttccgttctttcaaagctaccaaa
ttctttcagtccaccaagctggactgggtggaggtagggctgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccggaagaacctcaactatctgcacttggactac
aacttcaacctgaagcctgtcaagacgctcaccaccaaggaaagaaagaaatcccgtttt
gggaatgctttccatctatgtcgggaagtactgcgtttaaccaagctggttgtggacagc
catgtgcagtatcgcttgggcaatgtagatgccttccagctggcagatggtttgcagtat
atatttgcccacgtgggacagttgacaggcatgtatcgatacaaatataagctgatgcgg
cagatccgcatgtgcaaggacttgaaacatctcatctattaccgcttcaacacgggtcct
gtagggaaaggccctggctgtggtttctgggctgctggctggcgggtctggctgttcttt
atgcgtggaattacccctctgctagagcgatggctgggcaaccttctggcccgacagttt
gaaggccgtcactcaaagggggtggcaaagacagtaacgaagcagcgggtggagtcgcac
tttgacctggagctcagggctgctgtgatgcacgacattctggacatgatgcctgaaggc
atcaagcagaacaaggcccggacaattctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacatcccttggaaggtcccaggactgccaacacctatagagaatatgattctt
cggtacgttaaggccaaggctgattggtggaccaatactgcccactacaaccgggaacgg
atccgtcgcggggctactgtagacaagactgtttgcaaaaagaacctgggccgcctcact
cgcctgtatctgaaggcagagcaggagcggcagcacaattacctgaaggatgggccttac
atcacagccgaggaggcagtggccgtgtataccaccactgtgcactggctggagagccgg
agattctcgcccatccccttccctccactctcctacaagcatgataccaagctgctcatc
ttggctctggagcgtctcaaggaagcttatagtgtgaagtctaggttaaaccagtctcag
agggaggagctgggtctgattgaacaagcctatgacaacccccatgaggctttgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaggaagtgggcattgagtttatggat
ctctatagccaccttgtaccagtgtatgatgtggaaccactggagaaaataactgatgct
tacctggaccagtacctgtggtatgaagcagataaacgccgtcttttcccaccctggatc
aagcctgctgacacagagccacctccactgcttgtttacaagtggtgtcaaggcattaat
aacctgcaggatgtgtgggagacgagtgagggcgagtgcaacgtcatgctggagtctcgg
tttgagaagatgtatgagaagattgacctgaccctgcttaacaggctgctgcgactcatt
gtggaccacaacatagctgactacatgacggccaagaacaacgtagtcatcaactataag
gacatgaaccatacaaactcatatggaatcatcagaggcctgcagtttgcctcattcatt
gtacagtactatggcttggtgatggatttgcttgtactgggattgcaccgggccagtgag
atggctgggcctcctcagatgccaaatgactttctcagtttccaggacatagccactgag
gctgcacacccaatccgactcttctgtagatacattgatcgcatccatattttcttcagg
ttcacagcagatgaggctcgggatctgatccagcgttacctgacagaacacccagacccc
aacaatgaaaacattgttggctacaataacaagaaatgctggccccgagatgcccgaatg
cggctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaaaaaccgg
ctgccacgatcggtgactacagtacagtgggagaatagctttgtgtctgtgtacagtaaa
gacaaccccaacctgctattcaacatgtgtggctttgagtgccgcatcctgcctaagtgc
cgtaccagctatgaagagttcacccacaaggacggggtctggaacctacagaatgaggtt
accaaggagcggacagctcagtgcttcctgcgtgtggatgatgagtcaatgcaacgcttc
cataaccgtgtgcggcagattctgatggcctctggctccaccacgttcaccaagattgtg
aataagtggaacacagctctcatcggccttatgacatattttcgagaggctgtggtgaat
acacaggaactcctggacttattggtgaagtgtgaaaacaagatccagacacgtatcaag
attggattgaactccaagatgcctagccggttcccgcctgttgtattctacacccctaag
gagctgggtgggcttggcatgctctcgatgggccatgtgcttatcccccagtctgacctc
aggtggtccaagcagacagatgtgggcatcacacacttccgttcaggaatgagtcatgaa
gaagaccaactgattcccaacttgtaccgctacatacagccatgggagagcgagttcatt
gactcccagcgggtctgggctgagtatgcactcaagagacaagaggctattgctcagaac
agacgcttgactttagaagatttagaagattcatgggatcgaggcattccccggatcaat
accctcttccagaaagaccggcacacattggcttatgataaaggctggcgtgtccgaact
gactttaagcagtaccaggttttgaagcagaaccccttttggtggacacatcagcggcat
gatggcaagctttggaacctcaataactaccgcacagacatgattcaggcgctgggtggt
gtggagggcattctggagcacactctcttcaagggcacttacttccccacctgggagggt
ctgttctgggagaaagccagtggctttgaggagtccatgaagtggaagaagctgaccaat
gctcagcgatcaggattaaaccagattcctaatcgtagatttaccctctggtggtcccca
accatcaatcgagccaatgtctatgtgggcttccaggtgcagctggacctgacaggaatc
ttcatgcacggcaagatccccacactgaagatctctctcatccagatattccgagctcac
ttgtggcagaagatccatgagagcatcgtgatggacttgtgtcaggtctttgaccaggaa
ctggatgcactggaaattgagacagtgcaaaaggagacaatccatccccgaaagtcctat
aagatgaactcttcctgtgcggatatactactctttgcctcctataagtggaatgtctcc
cggccctcgctgctggcagactccaaggatgtgatggacagcaccaccacacagaagtat
tggattgacatccaattacgctggggagactatgattcccatgatattgagcgctatgcc
cgggccaagttcctggattacaccacagacaacatgagtatctacccttcgcccacaggc
gtgctcattgccattgatctggcctataatctacacagtgcctatggaaactggttcccg
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgcgttg
tatgtgttacgtgaacggatacgcaaaggattacagctgtattcatctgagcccactgag
ccttacctgtcctctcagaactatggtgaactcttctctaaccagattatctggtttgtg
gatgacaccaatgtctatagagtaactatccacaagacctttgaggggaacttgacaact
aaacccatcaatggggccatcttcatcttcaatccacgaacgggacagctgttcctcaag
ataatccacacatctgtatgggctggacagaagcgtttgggtcagttggccaagtggaag
actgctgaggaagtggctgccctgatccgatctctgcctgtggaggaacagcctaaacag
atcattgtcactcggaagggcatgctggatcctctggaggtccacttactggatttcccc
aatattgtgatcaaaggatcggagctccagctgcccttccaggcttgtctcaaggtggag
aagtttggggatctcatccttaaagccaccgagccccagatggtccttttcaacctctat
gatgactggctcaagactatctcctcctacacggctttctcccgtctcattctgattctg
cgggctttgcatgtgaacaatgatagagcaaaggtgatcctgaagccagacaagactact
gttacggaaccccaccacatctggcccacgctgactgacgaggaatggatcaaggtggag
gtacagctcaaggatctgatcttggctgactacggcaagaaaaacaacgtgaatgtggcg
tcactgacacagtcagaaattcgagacatcatcctgggaatggagatctcggcgccatcg
cagcagcggcagcagatagctgagattgaaaagcagaccaaggaacagtcccagctcact
gctacacagactcgaactgtcaacaagcacggtgacgagattatcacttcaaccactagc
aactatgagacccagaccttctcatcaaagactgaatggagagtcagggccatctctgct
gccaacctgcatctgcggaccaatcatatttatgtttcatctgatgacattaaggagact
ggttatacgtacattcttccgaaaaacgtgcttaagaagttcatctgcatatctgatctt
cgtgcccaaattgcaggatacctgtatggggtgagccctccagataaccctcaggtgaag
gagatccgttgtattgtgatggtgccgcagtggggcacgcaccagactgtgcacctgccc
agccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgaatccccccagctatcaccccaagatgtcaccactcatgccaaaatcatg
gctgacaacccatcttgggatggggagaagactattatcatcacgtgcagcttcacacca
ggctcctgcacactgacagcctacaagctgacacccagtgggtatgagtggggccggcag
aacacagacaaaggcaacaaccccaaaggctacctaccctcgcactacgagagggttcag
atgctcctgtctgaccgattcctcggcttcttcatggtccccgcccagtcctcctggaac
tacaactttatgggtgttcgacatgatcccaacatgaaatacgagctgcagctggcaaac
cccaaggaattctaccatgaggtccacaggccctcccacttcctcaacttcgcccttctg
caggagggtgaggtctactctgcagacagagaggacctctatgcctag
DBGET
integrated database retrieval system
