Mus musculus (house mouse): 192160
Help
Entry
192160 CDS
T01002
Symbol
Casc3, Btz, Mln51
Name
(RefSeq) exon junction complex subunit
KO
K14323
protein CASC3
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
192160 (Casc3)
03015 mRNA surveillance pathway
192160 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
192160 (Casc3)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
192160 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
192160
NCBI-ProteinID:
NP_619601
MGI:
2179723
Ensembl:
ENSMUSG00000078676
UniProt:
Q8K3W3
LinkDB
All DBs
Position
11:98700634..98724633
Genome browser
AA seq
698 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGSPARGGGSCSGSVGGGGSGSLPSQRGGRGGGLHL
RRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEDYSEEENSKVELKSEANDA
ADSSAKEKGEEKPESKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIP
RKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYD
IRSAHNPDDIKPRRIRKPRFGSSPQRDPNWIGDRSSKSHRHQGPGGNLPPRTFINRNTAG
TGRMSASRNYSRSGGFKDGRTSFRPVEVAGQHGGRSAETLKHEASYRSRRLEQTPVRDPS
PEPDAPLLGSPEKEEVASETPAAVPDITPPAPDRPIEKKSYSRARRTRTKVGDAVKAAEE
VPPPSEGLASTATVPETTPAAKTGNWEAPVDSTTGGLEQDVAQLNIAEQSWSPSQPSFLQ
PRELRGVPNHIHMGAGPPPQFNRMEEMGVQSGRAKRYSSQRQRPVPEPPAPPVHISIMEG
HYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQSPGPLPNPGLYPPPVS
MSPGQPPPQQLLAPTYFSAPGVMNFGNPNYPYAPGALPPPPPPHLYPNTQAPPQVYGGVT
YYNPAQQQVQPKPSPPRRTPQPVSIKPPPPEVVSRGSS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcccaggacacggaggacgaggaatccggggct
tcgggttccgacagcggctctccggcgcggggcggcggcagctgcagcgggagcgtcgga
ggcggcggcagtggctcgctgccttctcagcgcggcggccgcggcgggggccttcacctg
cggcgggtggagagcgggggcgccaagagcgccgaggagtctgagtgtgagagtgaagat
ggcatggaaggagatgctgttctttccgattatgaaagtgcagaagattcagaaggtgaa
gaagactacagtgaagaggagaattccaaggtggagctgaaatcagaagctaacgatgct
gctgattcctctgcgaaagaaaagggagaggaaaagcctgagtctaaaggcacggtgact
ggggagaggcagagcggcgatgggcaggagagcacagagcctgtggagaacaaagtgggg
aaaaaaggccctaagcacttggatgacgatgaggatcggaaaaacccagcctacatcccc
aggaaagggctcttctttgagcacgatcttcgaggacagactcaggaggaggaagtccga
cccaagggacggcagcgaaagctatggaaagatgagggtcgctgggaacatgataagttc
cgtgaggatgaacaggccccgaaatctcggcaggagctaattgcactttatggttatgac
attcggtctgctcacaatcctgatgacatcaaaccccgaagaatccggaaacctcgattt
ggaagttccccacaaagagatccaaactggattggtgatcgatcaagcaaatcccatcgc
caccagggtcctgggggcaatctaccacctaggacatttattaacaggaacacggcaggt
actggccgcatgtctgcatccaggaattactctcgatctgggggcttcaaggatggccgc
actagtttcaggcctgtggaggttgctgggcagcatggtggccggtctgctgagactctt
aagcatgaagctagttaccggtcacggcgtctagagcagactcctgtgagggatccatct
ccagagccagatgctccattgcttggaagtcctgagaaagaagaggtggcctcagagacg
ccagctgctgtacccgacatcaccccaccagctcctgacaggcccattgagaagaagtcc
tattcccgggcaagaaggaccaggaccaaagttggggatgcagtcaaagctgctgaggag
gttcctcctccatctgaagggctggcctcaacagccacagtccccgaaacgactccagct
gctaagactgggaactgggaggctccagtagactctaccacaggtggacttgagcaagat
gtggcgcagctaaatatagcagaacaaagttggagtccaagccagccttcattcttgcag
ccacgggaacttcgaggtgtgcctaaccacatccacatgggagcaggacccccacctcag
tttaaccggatggaagaaatgggcgtccagagtggtcgagctaagcgttactcatcccag
cggcagagacctgtgccagagccccctgctcctcctgtgcatatcagtatcatggaggga
cattactatgatccattgcagttccagggaccaatctatacccatggtgacagccctgcc
ccactgcccccacagggcatgatcgtacagccggaaatgcaccttccccacccaggttta
catccccaccagtcaccaggacctctgcccaacccgggtctctacccaccaccagtgtcc
atgtccccaggacagccaccgccccagcaactgcttgctcctacctacttttctgctccg
ggtgtcatgaattttggtaaccccaattacccttatgctccgggagcattgccacctcct
ccacctcctcatctgtatcctaacacgcaggctccaccacaggtgtatggaggagtgact
tactataaccccgcccagcagcaggtgcagcccaagccctccccaccccggaggactccc
cagccggtctccatcaagccccccccacctgaggttgtaagcaggggttccagttaa
DBGET
integrated database retrieval system