Mus musculus (house mouse): 19360
Help
Entry
19360 CDS
T01002
Symbol
Rad50, Mrell, Rad50l
Name
(RefSeq) RAD50 double strand break repair protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03440
Homologous recombination
mmu03450
Non-homologous end-joining
mmu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
19360 (Rad50)
03450 Non-homologous end-joining
19360 (Rad50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
19360 (Rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmu03032
]
19360 (Rad50)
03400 DNA repair and recombination proteins [BR:
mmu03400
]
19360 (Rad50)
DNA replication proteins [BR:
mmu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
19360 (Rad50)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
19360 (Rad50)
BRCA1-C complex
19360 (Rad50)
NHEJ (non-homologous end-joining)
MRX complex
19360 (Rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ABC_tran
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
19360
NCBI-ProteinID:
NP_033038
MGI:
109292
Ensembl:
ENSMUSG00000020380
UniProt:
Q5SV02
LinkDB
All DBs
Position
11:complement(53540346..53598146)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIISFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEMVAVHRSMLCSQKNKKTEFKTLEGVITR
MKHGEKVSLSSKCAEIDREMISCLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALDTLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLASSQEI
VRSYEDELEPLKNRLKEIEHNLSKIMKLDNEIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKEARLLNQEKAELLVEQGRLQLQADRH
QEHIRARDSLIQSLATHLELDGFERGPFSERQIKNFHELVKERQEREAKTASQLLSDLTD
KEALKQRQLDELRDRKSGLGRTIELKTEILTKKQSELRHVRSELQQLEGSSDRILELDQE
LTKAERELSKAEKNSSIETLKAEVMSLQNEKADLDRSLRKLDQEMEQLNHHTTTRTQMEM
LTKDKTDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKKKEEQLSSYEDKLFDVCGSQDLESDLGRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKERRRDEMLGLVPVRQSIIDLKEKEIPELRNRLQSVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHRLD
TVTSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIATNLQRRQQMEEQSVELSTEVQS
LNREIKDAKEQISPLETALEKLQQEKEELIHRKHTSNKMAQDKINDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKETELNGVAVQLNECEKHREKINKDMGTMRQDIDTQKIQERWLQD
NLTLRKRRDELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDTIKRNHSLALGRQKG
YEDEILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRVKKNMDQCSEIVKCSISSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcgaagttttgggatagaggataaa
gataagcagattatctctttcttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaagtatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagacgtgcgggcc
cagattcgcctgcagtttcgagatgtgaatggagagatggtagctgtgcacaggtctatg
ctttgcagtcagaaaaataaaaaaacagaatttaaaaccttggaaggagtcattactaga
atgaagcatggtgaaaaagtcagtctcagctccaaatgtgcagaaatcgacagagaaatg
ataagttgtcttggggtttccaagtctgtgctaaacaatgttattttctgtcaccaagaa
gactccaactggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgagattttt
tcggcaacaaggtacattaaagccttagatacacttcgacaggtgcgtcagacacagggt
cagaaagtaaaagagtgtcaaacggaattgaaatatctgaagcaaaataaggagaaagcg
tgtgagatccgagatcagattacgagtaaggaagcccagttagcgtcttcgcaggaaatt
gtcaggtcctacgaggatgagcttgagccattgaagaatcgcctgaaagagattgaacac
aacctgtctaaaataatgaaacttgataatgaaattaaagccttggagagccgaaagaaa
caaatggagaaagataacagtgaattagaacagaaaatggaaaaggtttttcaagggact
gatgagcagctaaatgacttgtatcacaatcaccagagaacagtaagggagaaagaaagg
cgcctggtagactgccagcgagaactggagaagctgaataaagaagcacggctcctcaac
caggaaaaagcagagctgcttgtggagcagggtcgtctacagctacaggcagatcgccat
caagagcacatccgagccagagactcattaattcagtctttggcaacacatcttgaattg
gatggttttgagcgtggaccattcagtgaaagacagattaaaaattttcatgaacttgtg
aaagagagacaggaaagagaagctaaaactgccagccagctcttgagcgacctgacagac
aaagaagctctgaagcagaggcagcttgatgagctgagggacaggaagagcggactgggg
aggacgattgagctgaagacagagatcctcacgaagaagcagagcgagctgcggcacgtg
aggagtgagctgcagcagctggagggctcctccgacaggattctggaactggaccaggag
ctcacgaaagctgaacgtgaattaagcaaggccgagaaaaatagcagcatagaaacccta
aaagcagaggtaatgagcctccaaaatgagaaagctgacctggacaggagcttgcgaaag
ctggaccaggagatggagcagttaaaccatcatacaacaacccgcacacagatggagatg
ctcaccaaagacaaaactgacaaagatgaacagatcagaaaaataaagtctaggcacagt
gatgaactaacttcactgttggggtactttcctaacaaaaaacagcttgaagactggctt
cattctaaatccaaagaaattaatcagaccagggacagacttgccaaactgaacaaagag
ctagcttcagctgaacaaaataaaaatcatataaataatgagctaaagaaaaaggaagaa
cagttgtccagttatgaagataagctatttgatgtttgtggtagccaagatttggaaagt
gatttgggcagacttaaagaagaaattgaaaagtcctcaaagcagcgagccatgctggca
ggagccacagcagtttactcccagttcattacgcagctgacagatgaaaaccagtcctgc
tgcccagtctgtcagagagtatttcagacagaggctgagttacaggaagtcatcagcgac
ttgcagtccaagctgaggcttgctccagataaactcaagtcaacagaatcggaactgaag
aaaaaagagcggcgccgtgatgaaatgcttgggcttgtgcccgtgaggcaaagcataatt
gatttgaaggaaaaggaaataccagaattaagaaaccgactacagagtgtcaatagagac
atacagcgcctaaagaatgacatagaagagcaggaaacactcttgggtacaataatgcct
gaagaagaaagtgctaaagtgtgcctgacagatgttacaatcatggagaggttccagatg
gagctgaaagatgttgaaaggaaaattgcacagcaggcagctaagctgcagggagtagac
ttggaccggactgtccagcaggttaaccaggaaaagcaggaaaagcagcacaggctggat
acagttaccagtaagattgaattgaaccgtaagcttatacaggaccagcaggaacaaatc
caacacctgaaaagtaaaacaaatgagctgaagtcagagaagctgcagatagccaccaat
ttgcaacggcgccagcaaatggaggagcagagtgtggaattatccactgaagtccagtct
ttaaacagagaaataaaggatgctaaagaacaaataagccctttggagacagcattggaa
aagttgcagcaggaaaaagaagaattaatccacagaaaacatacaagtaacaaaatggct
caggataaaattaatgatatcaaagagaaagttaaaaatattcatggttacatgaaagac
atagagaattatattcaagatggaaaagatgactacaagaagcaaaaagaaactgaactt
aatggagttgctgttcaactaaatgaatgtgagaaacacagagaaaagataaataaagac
atgggaaccatgaggcaagacatcgacacacagaagatacaggaaaggtggctacaggat
aaccttacactaagaaaaaggagagatgaactaaaagaagtggaagaagaacgaaaacaa
cacttgaaggagatgggacaaatgcaagttttacaaatgaaaaatgagcatcagaagttg
gaagagaacatagacactataaagagaaatcacagtttggcattggggcgtcagaaaggc
tatgaagacgaaattcttcactttaaaaaggagctccgagaacctcagttccgggatgcc
gaggaaaagtacagagaaatgatgatcgtcatgaggaccacagagctggtgaacaaggac
ctcgacatctactacaagactcttgaccaagcaattatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgatctttggcggagtacctatcgtgggcaagatatt
gaatacatagaaattcgatctgatgctgatgaaaatgtatcggcttctgataaaaggcga
aattacaactaccgagtggtgatgctgaagggggacacagccttggacatgcgtggacga
tgcagtgctggacagaaggtgctagcgtctctcatcatccgactggccctggcggaaacc
ttctgtctgaactgtggcatccttgccttggatgagccgacaacaaatctcgaccgagaa
aacattgagtctcttgcacatgctttggttgagatcataaaaagtcgctcacagcagcgc
aacttccaacttctggtaatcactcacgatgaagattttgtggagctcttagggcgatct
gagtatgtggagaaattctacagggtgaagaagaacatggaccagtgctcagagattgtc
aagtgcagcatcagctccctgggttcttatgttcactaa
DBGET
integrated database retrieval system
