Mus musculus (house mouse): 19377
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Entry
19377 CDS
T01002
Symbol
Rai1, Gt1
Name
(RefSeq) retinoic acid induced 1
KO
K19749
retinoic acid-induced protein 1
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
19377 (Rai1)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
19377 (Rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
19377
NCBI-ProteinID:
NP_001032853
MGI:
103291
Ensembl:
ENSMUSG00000062115
UniProt:
Q61818
Q5QGZ6
LinkDB
All DBs
Position
11:59995743..60090023
Genome browser
AA seq
1889 aa
AA seq
DB search
MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPGQAGLSCDRQRLLAKDYYSPQPYTGYE
GGTGTPSGTVATAAADKYHRGSKSLQGRPAFPSYVQDSSPYPGRYSGEEGLQTWGGPQPP
PPQPQPLPGAVSKYEENLMKKTVVPPPNRQYPEQGPQLPFRTHSLHVPPPQPQQPLAYPK
LQRQKPQNDLASPLPFPQGSHFPQHSQSFPTSSTYAPTVQGGGQGAHSYKSCTAPSAQPH
DRPMSANANLAPGQRVQNLHAYQPGRLGYEQQQQALQGRHHTQETLHYQNLAKYQHYGQQ
GQGYCPPDTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPL
STGAFPTGITDHSHFMPLLNPSPTDAASSVDPQAGNCKPLQKEKLPDNLLSDLSLQSLTA
LTSQVENISNTVQQLLLSKATMPQKKGVKNLVSRTPEQHKSQHCSPEGSGYSAEPAGTPL
SEPPSSTPQSTHAEPQDTDYLSGSEDPLERSFLYCSQARGSPARVNSNSKAKPESVSTCS
VTSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEA
IVEKADKAWAEASSLPKDNGKPPFSLENHGACLDTVAKTSWSQPGEPETLPEPLQLDKGG
STKDFSPGLFEDPSVAFATTDPKKTSSPLSFGTKPLLGTATPDPTTAAFDCFPDTPTASS
VDGANPFAWPEENLGDACPRWGLHPGELTKGLEQGAKASDGVGKADAHEASACMGFQEDH
AIGKPAAALSGDFKQQEAEGVKEEVGGLLQCPEVAKANQWLEESRHCCSSTDFGDLPLLP
PPGRKEDLEAEEEYSSLCELLGSPEQRPSLQDPLSPKAPLMCTKEEAEEALDTKAGWVSP
CHLSGEPAVLLGPSVGAQSKVQSWFESSLSHMKPGEEGPEMERAPGSSGTSQGSLAPKPN
KPAVPEGPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRVPALPKDLLLPESCTGPPQGQ
AEGAGAPGRGLSEGLPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRAAFKSGKR
VGKPSPKAASSPSNPAALPVASDSSPMGSKTKEPDSPSMPGKDQRSMVLRSRTKPQQVFH
AKRRRPSESRIPDCRATKKLPANNHLPTAYKVSSGPQKEGRMNQRVKVPKPGTGNKLSDR
PLHTLKRKSAFMAPVPAKKRSLILRSNNGSGGDGREERAESSPGLLRRMASPQRARPRGS
GEPPPPPPLEPPAACMGLSTQSSLPSAVRTKVLPPRKGRGLKLEAIVQKITSPGLKKLAC
RVAGAPPGTPRSPALPERRPGGSPAGAEEGLGGMGQMLPAASGADPLCRNPASRSLKGKL
LNSKKLSSAADCPKAEAFMSPETLPSLGTARAPKKRSRKGRTGTLGPSKGPLEKRPCPGQ
PLLLAPHDRASSTQGGGEDNSSGGGKKPKTEELGPASQPPEGRPCQPQTRAQKQPGQASY
SSYSKRKRLSRGRGKTAHASPCKGRATRRRQQQVLPLDPAEPEIRLKYISSCKRLRADSR
TPAFSPFVRVEKRDAYTTICTVVNSPGDEPKPHWKPSSSAASSSTSSSSLEPAGASLTTF
PGGSVLQQRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHCL
PKKKPKLKEKARLEGTLEEASLPLERTLKGLECSASTTAAAPTTATITTPTALGRLSRPD
GPADPAKQGPLRTSARGLSRRLQSCYCCDGQGDGGEEVAQADKSRKHECSKEAPTEPGGD
TQEHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAVDMPCTSCHEPGATISCSYKGCIHTY
HYPCANDTGCTFIEENFTLKCPKHKRLPL
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcaaaactacccacagacc
tcccaggagacatcgcgcctggagaactacaggcagccgggtcaggctgggctaagctgt
gatcggcagcggctgctggccaaggactactacagccctcagccctatacaggctatgag
ggtggcactggtacaccttctggcacggtggccacagcagctgcagacaagtaccaccga
ggcagcaaatccctgcaggggaggccagctttccccagctatgttcaagacagcagcccc
tacccagggcgctactctggcgaggaaggtcttcagacctgggggggcccacagccaccg
cctcctcagccacagcctctgcccggggcagtgagcaagtatgaggagaacctgatgaag
aagacagttgtgcctcctccaaacaggcagtaccctgagcagggcccccagcttcccttc
cggactcacagcctgcatgtcccaccaccacagcctcagcagcccctggcttaccccaaa
ctccaaaggcagaaaccacagaacgaccttgcctcccctctgcccttcccccagggcagc
cactttccccagcattcccagtccttccctacctcctccacttatgccccaacagtgcag
ggtggtgggcagggggcccactcctacaagagctgcacagcaccatctgcccagcctcat
gataggccgatgagtgccaatgcgaacctggctccagggcaacgggtccagaatcttcac
gcttaccagcctggccgccttggctacgagcagcagcagcaagcacttcaaggccgtcac
cacacccaggaaacactccactaccagaacctcgccaagtaccaacactatggacagcaa
ggccagggctactgtccaccggacacagctgtcaggactccagagcagtattaccagact
ttcagcccgagctccagccactcccctgcacggtctgtgggtcgctccccttcctatagc
tccaccccgtcaccactgatgcccaatctggagaacttcccctatagccagcagccgctt
agtactggggccttccccacaggcatcacagaccacagccactttatgcccctgcttaac
ccgtccccaacagatgctgccagctctgtggacccccaggccggcaactgcaagcccctg
caaaaggagaagctgcctgacaacttgctctccgacctcagcctgcagagcctcacagcg
ctcacctcccaggtggaaaacatctccaacaccgtgcagcagctcttgctgtccaaagct
accatgccacagaagaaaggggtcaagaacctcgtgtccaggactccagagcagcacaaa
agccagcactgtagccctgaaggcagcggctactcagctgagccagcgggcacaccgctg
tctgagccgccgagcagcacgccacagtccacccatgctgagccacaggacactgactac
ctgagtggctctgaggacccgctagagcgcagcttcctctactgcagccaggcccggggc
agccccgccagggtcaacagcaactccaaggctaagcccgagtctgtgtccacctgttct
gtgacctcacctgatgacatgtccaccaagtccgacgactctttccagagcctgcacagt
actctgcccctggacagcttctccaaatttgtggcaggcgagcgggactgcccgcggctg
ctgctcagtgccctggcacaggaagatctggcctccgagatcctgggactgcaggaagcc
attgttgagaaggctgacaaggcctgggctgaggcttccagcctgcccaaggacaatggc
aagccacccttctcactggagaaccatggcgcctgcctggacactgtagcaaagacttca
tggtcacagccaggggagccagagaccctccctgagcctttgcagctggacaagggtggc
agcaccaaggacttcagcccggggctgtttgaagacccctctgtggcctttgccaccact
gacccgaagaaaacaagcagtcccctgtccttcggcaccaagcctttgctagggactgcc
actcctgaccccaccacagcagcatttgactgctttccagatacacccactgccagctcg
gtggatggtgccaacccctttgcctggccagaggagaacctgggcgatgcttgtcctcgt
tggggcctccaccctggtgagcttaccaagggcttggaacagggtgcaaaagcctcggac
ggcgtgggcaaggcagatgcacacgaggcctctgcttgcatgggcttccaggaggatcat
gccatcgggaagccagcagccgcactgtccggggacttcaaacagcaggaggcagagggg
gtgaaagaggaggtgggtgggttgctgcagtgccccgaggtggccaaggccaaccagtgg
ctggaggagagccgccattgctgttcctccactgacttcggggacctgccactgttgccg
ccccctggcaggaaggaggacctggaagctgaagaggagtactcttctctgtgtgaactg
ctggggagccctgagcagaggcccagcctgcaggacccgttgtccccaaaggccccgctg
atgtgcaccaaggaggaggcagaggaggcgctggacaccaaggctggctgggtctctcca
tgtcacctctctggggagcctgctgtcctactgggcccctctgtgggtgcccaatcaaag
gttcagagctggtttgaatcttctctgtcacacatgaagccgggagaagaagggccagag
atggagagggctccaggtagttccggcacctcacaaggctccttggccccgaagcctaac
aagcctgctgtacctgaggggcccattgctaagaaagagcctgtgccacggggtaagagc
ttacggagccggcgagtacaccgggggctgcctgaggcggaagactctccgtgcagggtg
ccagcacttcccaaagacctcttgctcccagagtcttgcacagggcctccacagggacag
gccgagggggctggagccccaggccgggggctgtcagaagggctccccagaatgtgtacc
cgctcgcttacagctctgagtgagccccagactcctggacctccgggcctgactaccacc
cccacgcctcccgacaaactgggaggtaagcagcgagctgccttcaagtctggcaagcgg
gtcggaaaaccatcacccaaggctgcatccagccccagcaaccctgctgccctgcctgtt
gcctcagacagcagccccatgggctccaagaccaaggagccagactctcccagcatgcct
ggcaaggaccagcgctccatggtcctccggtctcgcaccaaaccccagcaggtcttccat
gccaaacggcggcggccctcggagagccggatcccagactgccgtgccaccaagaagctc
cctgctaacaaccatttacccactgcgtacaaggtctccagtgggccccagaaggaaggt
cggatgaaccagcgggtcaaagtacccaagcctggtacaggaaacaagctttcagatcgg
cctctccacacgctcaagaggaagtcggctttcatggcacctgtccccgccaaaaaacgg
agcctcatcctgagaagcaacaatggaagtgggggagacgggagggaggagagggctgag
agttcccctggcctcttacggaggatggcctcaccccagagggccagacccaggggtagt
ggggagccacccccacccccacccttggagccacctgctgcatgcatggggttgtctaca
cagtcatccctgcccagtgctgtgaggaccaaggtgctgccaccgcgaaagggccgcggc
ctcaagctggaggccatagtacagaagatcacctcacctgggctcaagaaactcgcatgc
agagtggcaggggcccctcctgggacaccccggagcccagccctgcctgagagacgtcca
gggggcagtccagccggggcggaagagggtttaggaggaatggggcaaatgctaccagca
gcttccggagctgacccattgtgcaggaacccagccagcaggtccctaaaaggtaaactc
ttgaacagtaagaagctgtcctctgctgctgactgccccaaagctgaggccttcatgtcc
ccggagaccctgccatcactagggactgcccgagcaccgaagaaaaggagccggaaaggc
agaactgggaccttgggaccctccaaaggtccgttggagaagcggccatgtccgggccag
cctctgctcctcgctccccacgacagggccagcagcactcagggcggaggcgaggacaac
tccagtggaggaggcaagaagccaaagacagaggagctgggaccggcctcccagccccct
gaaggccggccctgccagccccagacaagggcgcagaagcagccgggccaagccagctac
agcagctattccaagcggaagcgcctcagccgaggccgggggaagaccgcccacgcttca
ccctgtaagggacgtgccactcggagaaggcagcagcaggtactgcccctggatcctgca
gagcctgaaatccgactcaaatacatttcctcttgcaagaggctgcgggcagacagccgc
accccagccttctcgccctttgtgcgggtggagaagcgagatgcttacaccaccatatgc
actgtcgtcaactccccgggggatgagccgaagcctcactggaagccatcctcctctgct
gcctcctcctccacctcttcctcctccttagaaccagctggggcttctctgaccacattc
cctggaggctctgtgctgcagcagaggccctccctgcccctctcctccaccatgcatctg
gggcctgtggtgtccaaggccctaagtacctcttgccttgtctgctgcctctgccaaaac
ccggccaatttcaaggaccttggggacctctgtggcccctactaccctgaacactgcctc
cccaaaaagaagccaaaactcaaggagaaggcgcggctggagggcaccttggaggaggcc
tctctgcctctcgagagaacactcaaaggcctggaatgttcggccagcaccacggctgcc
gcccctaccacagccactatcactacccccacggccctggggagactgtccaggcccgat
ggcccagctgaccctgccaagcagggccccctgcgcaccagtgcccggggcctgtcacgg
cggctgcagagttgctattgctgtgatggtcagggggacgggggtgaggaggtggcccag
gctgacaagagccgcaaacatgaatgcagcaaagaggcccctacagaacctggtggggac
acccaggaacactgggtccatgaggcctgtgctgtgtggaccagcggggtgtacctggtg
gccgggaagctctttgggctgcaggaggccatgaaggtagctgtggacatgccgtgtacc
agctgtcacgagcccggggcgaccatctcgtgctcctataaaggatgtatccacacctac
cactacccatgtgccaatgacacaggttgcacgttcattgaggagaattttactttgaag
tgccccaaacataagaggctgccgttgtaa
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integrated database retrieval system
