Mus musculus (house mouse): 19401
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Entry
19401 CDS
T01002
Symbol
Rara, Nr1b1, RAR, RARalpha1
Name
(RefSeq) retinoic acid receptor, alpha
KO
K08527
retinoic acid receptor alpha
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04659
Th17 cell differentiation
mmu04915
Estrogen signaling pathway
mmu05200
Pathways in cancer
mmu05202
Transcriptional misregulation in cancer
mmu05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
19401 (Rara)
09152 Endocrine system
04915 Estrogen signaling pathway
19401 (Rara)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
19401 (Rara)
05202 Transcriptional misregulation in cancer
19401 (Rara)
09162 Cancer: specific types
05221 Acute myeloid leukemia
19401 (Rara)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
19401 (Rara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmu03310
]
19401 (Rara)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
19401 (Rara)
Nuclear receptors [BR:
mmu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
19401 (Rara)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
19401
NCBI-ProteinID:
NP_001170773
MGI:
97856
Ensembl:
ENSMUSG00000037992
UniProt:
P11416
Q3U3R3
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All DBs
Position
11:98818626..98865768
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AA seq
462 aa
AA seq
DB search
MASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTSLQHQLPVSGYSTPSPAT
IETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHRDKNCIINKVTRNRCQYCRLQKCFDVGMSKESVRNDRNKKKKEAPKPECSESYTL
TPEVGELIEKVRKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDKVDMLQEPLLEALK
VYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
DTLSGQSGGGTRDGGGLAPPPGSCSPSLSPSSHRSSPATQSP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaatagcagttcctgcccaacacctgggggcgggcacctcaatgggtaccca
gtacccccctacgccttcttctttccccctatgctgggtggactctccccacccggcgct
ctcaccagcctccagcaccagcttccagtcagtggttacagcacaccgtccccagccacc
atcgagacccagagcagcagttccgaagagatagtacccagccctccctcaccaccgccc
ctgccccgcatctacaagccttgctttgtttgtcaagacaaatcatccggctaccactat
ggggtcagcgcctgtgagggctgtaagggcttcttccgacgaagcatccagaagaacatg
gtgtatacgtgtcaccgggacaagaactgcatcatcaacaaggtgacccggaaccgctgc
cagtactgccggctgcagaaatgtttcgacgtgggcatgtccaaggagtcggtgcgaaac
gatcgaaacaaaaagaagaaagaggcacccaagcccgagtgctcagagagctacacgctg
acgcctgaggtgggcgagctcattgagaaggttcgcaaagcgcaccaggagaccttcccg
gccctctgccagctgggcaagtacactacgaacaacagctcagaacaacgagtctccctg
gacattgacctctgggacaagttcagtgaactctccaccaagtgcatcattaagactgtg
gagttcgccaagcagcttcccggcttcaccaccctcaccatcgccgaccagatcaccctc
ctcaaggctgcctgcctggatatcctgattctgcgaatctgcacgcggtacacgcctgag
caagacacaatgaccttctcagatggactgaccctgaaccggactcagatgcacaacgct
ggctttggccccctcaccgacttggtctttgccttcgccaaccagctgctgcccctggag
atggacgatgctgagactggactgctcagtgccatctgcctcatctgtggagaccgacag
gacctggagcagccagacaaggtggacatgctgcaagagccgctgctggaagcactgaaa
gtctacgtccggaaacggaggcccagccgaccccacatgttccccaagatgctgatgaag
atcacagaccttcggagcatcagcgccaagggagctgaacgggtgatcacattgaagatg
gagatcccaggctccatgccaccgctgatccaggaaatgctggagaactctgagggcttg
gacactctaagcggacagtcggggggcggaacacgagatgggggtggcctggccccccct
ccgggtagctgtagccccagcctcagtcccagctcccacagaagcagcccagccacccaa
tccccatga
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