Mus musculus (house mouse): 19883
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Entry
19883 CDS
T01002
Symbol
Rora, 9530021D13Rik, Nr1f1, ROR1, ROR2, ROR3, nmf267, sg, staggerer, tmgc26
Name
(RefSeq) RAR-related orphan receptor alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04659
Th17 cell differentiation
mmu04710
Circadian rhythm
mmu05017
Spinocerebellar ataxia
mmu05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
19883 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
19883 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
19883 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
19883 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
19883 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmu03310
]
19883 (Rora)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
19883 (Rora)
Nuclear receptors [BR:
mmu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
19883 (Rora)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
19883
NCBI-ProteinID:
NP_038674
MGI:
104661
Ensembl:
ENSMUSG00000032238
UniProt:
P51448
Q8C3F5
LinkDB
All DBs
Position
9:68560627..69295528
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AA seq
523 aa
AA seq
DB search
MESAPAAPDPAASEPGSSGSEAAAGSRETPLTQDTGRKSEAPGAGRRQSYASSSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYNISANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgaaccgggcagcagcggctcg
gaggcggccgcgggctccagggagaccccgctgacccaggacacgggccgcaagagcgag
gcaccgggcgcggggcgcaggcagagctatgcgagctccagccgaggtatctcagtcacg
aagaagacacacacatctcaaattgaaattattccatgcaagatctgtggagacaaatcg
tcaggaatccattatggtgtcattacgtgtgaaggctgcaagggctttttcaggagaagt
cagcagagcaatgccacctactcctgtcctcgtcagaagaactgtttgattgatcggacc
agcagaaaccgctgccagcattgtcggctgcagaaatgcctggccgtggggatgtctcga
gatgctgtcaagtttggtcggatgtccaagaagcagagagacagcttgtacgccgaggtg
cagaagcaccggatgcagcagcagcagcgagaccaccagcagcagcctggggaggcggag
ccgctgacgcccacctacaacatctcagccaatgggctgacggaactgcatgatgacctc
agcacctatatggatgggcacacccccgagggcagcaaggccgactcagccgtcagcagc
ttctacctggacatccagccctccccagaccagtcgggattggacatcaatgggatcaaa
cccgaacccatatgtgactacacaccagcatctggcttcttcccctactgttccttcacc
aacggagagacttccccaaccgtgtccatggcagaactagaacaccttgcccagaacata
tccaaatcccacctggaaacctgccagtacttgcgggaagagctccagcagataacgtgg
cagaccttcctgcaggaggagattgaaaactaccagaacaagcagagagaggtgatgtgg
cagctgtgtgccatcaagattacagaagctatccagtatgtggtggagtttgccaaacgc
attgatggatttatggagctgtgtcaaaatgatcaaattgtgcttctaaaagcaggctcg
ctagaggtggtgtttattaggatgtgccgtgcctttgactctcagaacaacaccgtgtac
tttgacgggaagtatgcgagccccgatgtcttcaagtccctaggttgtgaagacttcatc
agctttgtgtttgaatttgggaagagtttgtgttctatgcacctgaccgaagacgaaatc
gcgttattttctgcattcgtactgatgtcagcggatcgctcgtggcttcaggaaaaggta
aaaatagaaaagctgcaacagaaaattcagctggcccttcagcacgtcctacagaagaac
caccgagaagatggaattctaaccaagctaatatgcaaggtgtctacgttaagagcccta
tgtggacgacatacggaaaagctaatggcatttaaagcaatatacccagacattgtgcga
ctccattttcctccattatacaaggaattgttcacttcagaatttgagccagccatgcaa
atcgatgggtaa
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