Mus musculus (house mouse): 19885
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Entry
19885 CDS
T01002
Symbol
Rorc, Nr1f3, RORgamma, TOR, Thor
Name
(RefSeq) RAR-related orphan receptor gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04659
Th17 cell differentiation
mmu04710
Circadian rhythm
mmu05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
19885 (Rorc)
09159 Environmental adaptation
04710 Circadian rhythm
19885 (Rorc)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
19885 (Rorc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
19885 (Rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmu03310
]
19885 (Rorc)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
19885 (Rorc)
Nuclear receptors [BR:
mmu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
19885 (Rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Emfourin
Motif
Other DBs
NCBI-GeneID:
19885
NCBI-ProteinID:
NP_035411
MGI:
104856
Ensembl:
ENSMUSG00000028150
UniProt:
P51450
A0A0R4J096
Structure
PDB
PDBj
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All DBs
Position
3:94280106..94305583
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AA seq
516 aa
AA seq
DB search
MDRAPQRHHRTSRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQQQQQEQVAKTPPAGSRGADTLTYTLGLSDGQLPLGASPDLPEASACPPGLLRASGS
GPPYSNTLAKTEVQGASCHLEYSPERGKAEGRDSIYSTDGQLTLGRCGLRFEETRHPELG
EPEQGPDSHCIPSFCSAPEVPYASLTDIEYLVQNVCKSFRETCQLRLEDLLRQRTNLFSR
EEVTSYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIILLKAGAMEVVL
VRMCRAYNANNHTVFFEGKYGGVELFRALGCSELISSIFDFSHFLSALCFSEDEIALYTA
LVLINANRPGLQEKRRVEHLQYNLELAFHHHLCKTHRQGLLAKLPPKGKLRSLCSQHVEK
LQIFQHLHPIVVQAAFPPLYKELFSTDVESPEGLSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccggacatctcgggagctgctggctgcaaagaag
acccacacctcacaaattgaagtgatcccttgcaagatctgtggggacaagtcatctggg
atccactacggggttatcacctgtgaggggtgcaagggcttcttccgccgcagccagcag
tgtaatgtggcctactcctgcacgcgtcagcagaactgccccattgaccgaaccagccgc
aaccgatgccagcattgccgcctgcagaagtgcctggctctgggcatgtcccgagatgct
gtcaagtttggccgaatgtccaagaagcagagggacagtctacatgcagaagtgcagaaa
caactgcaacagcagcagcaacaggaacaagtggccaagactcctccagctgggagccgc
ggagcagacacacttacatacactttagggctctcagatgggcagctaccactgggcgcc
tcacctgacctacccgaggcctctgcttgtccccctggcctcctgagagcctcaggctct
ggcccaccatattccaataccttggccaaaacagaggtccagggggcctcctgccacctt
gagtatagtccagaacgaggcaaagctgaaggcagagacagcatctatagcactgacggc
caacttactcttggaagatgtggacttcgttttgaggaaaccaggcatcctgaacttggg
gaaccagaacagggtccagacagccactgcattcccagtttctgcagtgccccagaggta
ccatatgcctctctgacagacatagagtacctggtacagaatgtctgcaagtccttccga
gagacatgccagctgcgactggaggaccttctacggcagcgcaccaacctcttttcacgg
gaggaggtgaccagctaccagaggaagtcaatgtgggagatgtgggagcgctgtgcccac
cacctcactgaggccattcagtatgtggtggagtttgccaagcggctttcaggcttcatg
gagctctgccagaatgaccagatcatactactgaaagcaggagcaatggaagtcgtccta
gtcagaatgtgcagggcctacaatgccaacaaccacacagtcttttttgaaggcaaatac
ggtggtgtggagctgtttcgagccttgggctgcagcgagctcatcagctccatatttgac
ttttcccacttcctcagcgccctgtgtttttctgaggatgagattgccctctacacggcc
ctggttctcatcaatgccaaccgtcctgggctccaagagaagaggagagtggaacatctg
caatacaatttggaactggctttccatcatcatctctgcaagactcatcgacaaggcctc
ctagccaagctgccacccaaaggaaaactccggagcctgtgcagccaacatgtggaaaag
ctgcagatcttccagcacctccaccccatcgtggtccaagccgccttccctccactctat
aaggaactcttcagcactgatgttgaatcccctgaggggctgtcaaagtga
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