Mus musculus (house mouse): 20181
Help
Entry
20181 CDS
T01002
Symbol
Rxra, 9530071D11Rik, Nr2b1, RXRalpha1
Name
(RefSeq) retinoid X receptor alpha
KO
K08524
retinoid X receptor alpha
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03320
PPAR signaling pathway
mmu04148
Efferocytosis
mmu04151
PI3K-Akt signaling pathway
mmu04659
Th17 cell differentiation
mmu04919
Thyroid hormone signaling pathway
mmu04920
Adipocytokine signaling pathway
mmu04928
Parathyroid hormone synthesis, secretion and action
mmu04932
Non-alcoholic fatty liver disease
mmu04976
Bile secretion
mmu05160
Hepatitis C
mmu05200
Pathways in cancer
mmu05202
Transcriptional misregulation in cancer
mmu05207
Chemical carcinogenesis - receptor activation
mmu05216
Thyroid cancer
mmu05222
Small cell lung cancer
mmu05223
Non-small cell lung cancer
mmu05226
Gastric cancer
mmu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
20181 (Rxra)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
20181 (Rxra)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
20181 (Rxra)
09152 Endocrine system
04920 Adipocytokine signaling pathway
20181 (Rxra)
03320 PPAR signaling pathway
20181 (Rxra)
04919 Thyroid hormone signaling pathway
20181 (Rxra)
04928 Parathyroid hormone synthesis, secretion and action
20181 (Rxra)
09154 Digestive system
04976 Bile secretion
20181 (Rxra)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
20181 (Rxra)
05202 Transcriptional misregulation in cancer
20181 (Rxra)
05207 Chemical carcinogenesis - receptor activation
20181 (Rxra)
09162 Cancer: specific types
05226 Gastric cancer
20181 (Rxra)
05216 Thyroid cancer
20181 (Rxra)
05222 Small cell lung cancer
20181 (Rxra)
05223 Non-small cell lung cancer
20181 (Rxra)
09172 Infectious disease: viral
05160 Hepatitis C
20181 (Rxra)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
20181 (Rxra)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
20181 (Rxra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
20181 (Rxra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmu03310
]
20181 (Rxra)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
20181 (Rxra)
Nuclear receptors [BR:
mmu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
20181 (Rxra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
20181
NCBI-ProteinID:
NP_035435
MGI:
98214
Ensembl:
ENSMUSG00000015846
UniProt:
P28700
A2AJP1
Q3UMU4
Structure
PDB
PDBj
LinkDB
All DBs
Position
2:27566457..27653331
Genome browser
AA seq
467 aa
AA seq
DB search
MDTKHFLPLDFSTQVNSSSLNSPTGRGSMAVPSLHPSLGPGIGSPLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPVSSTEDIKPPLGLNG
VLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQAT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacatttcctgccgctcgacttctctacccaggtgaactcttcgtccctc
aactctccaacgggtcgaggctccatggctgtcccctcgctgcacccctccttgggtccg
ggaatcggctctccactgggctcgcctgggcagctgcactctcctatcagcaccctgagc
tcccccatcaatggcatgggtccgcccttctctgtcatcagctcccccatgggcccgcac
tccatgtcggtacccaccacacccacattgggcttcgggactggtagcccccagctcaat
tcacccatgaaccctgtgagcagcactgaggatatcaagccgccactaggcctcaatggc
gtcctcaaggttcctgcccatccctcaggaaatatggcctccttcaccaagcacatctgt
gctatctgtggggaccgctcctcaggcaaacactatggggtatacagttgtgagggctgc
aagggcttcttcaagaggacagtacgcaaagacctgacctacacctgccgagacaacaag
gactgcctgatcgacaagagacagcggaaccggtgtcagtactgccgctaccagaagtgc
ctggccatgggcatgaagcgggaagctgtgcaggaggagcggcagcggggcaaggaccgg
aatgagaacgaggtggagtccaccagcagtgccaacgaggacatgcctgtagagaagatt
ctggaagccgagcttgctgtcgagcccaagactgagacatacgtggaggcaaacatgggg
ctgaaccccagctcaccaaatgaccctgttaccaacatctgtcaagcagcagacaagcag
ctcttcactcttgtggagtgggccaagaggatcccacacttttctgagctgcccctagac
gaccaggtcatcctgctacgggcaggctggaacgagctgctgatcgcctccttctcccac
cgctccatagctgtgaaagatgggattctcctggccaccggcctgcacgtacaccggaac
agcgctcacagtgctggggtgggcgccatctttgacagggtgctaacagagctggtgtct
aagatgcgtgacatgcagatggacaagacggagctgggctgcctgcgagccattgtcctg
ttcaaccctgactctaaggggctctcaaaccctgctgaggtggaggcgttgagggagaag
gtgtatgcgtcactagaagcgtactgcaaacacaagtaccctgagcagccgggcaggttt
gccaagctgctgctccgcctgcctgcactgcgttccatcgggctcaagtgcctggagcac
ctgttcttcttcaagctcatcggggacacgcccatcgacaccttcctcatggagatgctg
gaggcaccacatcaagccacctag
Mus musculus (house mouse): 20182
Help
Entry
20182 CDS
T01002
Symbol
Rxrb, H-2RIIBP, Nr2b2, RCoR-1, Rub
Name
(RefSeq) retinoid X receptor beta
KO
K08525
retinoid X receptor beta
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03320
PPAR signaling pathway
mmu04659
Th17 cell differentiation
mmu04919
Thyroid hormone signaling pathway
mmu04920
Adipocytokine signaling pathway
mmu04928
Parathyroid hormone synthesis, secretion and action
mmu05200
Pathways in cancer
mmu05202
Transcriptional misregulation in cancer
mmu05207
Chemical carcinogenesis - receptor activation
mmu05216
Thyroid cancer
mmu05222
Small cell lung cancer
mmu05223
Non-small cell lung cancer
mmu05226
Gastric cancer
mmu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
20182 (Rxrb)
09152 Endocrine system
04920 Adipocytokine signaling pathway
20182 (Rxrb)
03320 PPAR signaling pathway
20182 (Rxrb)
04919 Thyroid hormone signaling pathway
20182 (Rxrb)
04928 Parathyroid hormone synthesis, secretion and action
20182 (Rxrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
20182 (Rxrb)
05202 Transcriptional misregulation in cancer
20182 (Rxrb)
05207 Chemical carcinogenesis - receptor activation
20182 (Rxrb)
09162 Cancer: specific types
05226 Gastric cancer
20182 (Rxrb)
05216 Thyroid cancer
20182 (Rxrb)
05222 Small cell lung cancer
20182 (Rxrb)
05223 Non-small cell lung cancer
20182 (Rxrb)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
20182 (Rxrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
20182 (Rxrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmu03310
]
20182 (Rxrb)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
20182 (Rxrb)
Nuclear receptors [BR:
mmu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
20182 (Rxrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
20182
NCBI-ProteinID:
NP_035436
MGI:
98215
Ensembl:
ENSMUSG00000039656
UniProt:
P28704
LinkDB
All DBs
Position
17:34250786..34257377
Genome browser
AA seq
520 aa
AA seq
DB search
MSWATRPPFLPPRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAGEQQALEP
EPGEAGRDGMGDSGRDSRSPDSSSPNPLSQGIRPSSPPGPPLTPSAPPPPMPPPPLGSPF
PVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPP
PPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ
RNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGDGAGGAPEEMPVDRILEAELAVEQ
KSDQGVEGPGATGGGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLR
AGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRM
DKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRL
PALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccactcgtccgcccttcctcccgccgcggcatgccgcggggcagtgtggg
ccggtgggggtgagaaaagagatgcattgtggggtcgcgtcccggtggcggcggcggcgg
ccctggctggatcccgcggcggcggcggcggcggccggagagcagcaagccctggagccg
gagccgggggaggctggccgggacgggatgggcgacagcgggcgggattcccgaagccca
gacagctcctccccaaatcccctttctcaggggatccgtccgtcttctcctcctggccca
cctcttaccccttcagcacctccacctccaatgccacccccgccactgggctcccccttc
ccagtcatcagttcttccatggggtcccctggtctgccccctccggctcccccaggattc
tccgggcctgtcagcagccctcagatcaactccacagtgtcgctccctgggggtgggtct
ggcccccctgaagatgtgaagccaccggtcttaggggtccggggcctgcactgtccaccc
cctccaggtggtcctggggctggcaaacggctctgtgcaatctgcggggaccgaagctca
ggcaagcactatggggtttacagctgcgagggctgcaagggtttcttcaagcgcaccatt
cggaaggacctgacctactcgtgtcgtgataacaaagactgtacagtggacaagcgccag
cggaatcgctgtcagtactgtcgctatcagaagtgcctggccactggcatgaaaagggag
gcggttcaggaggagcgtcaacgggggaaggacaaagacggggatggagatggggctggg
ggagcccctgaggagatgcctgtggacaggatcctggaggcagagcttgctgtggagcag
aagagtgaccaaggcgttgagggtcctggggccaccgggggtggtggcagcagcccaaat
gacccagtgactaacatctgccaggcagctgacaaacagctgttcacactcgttgagtgg
gcaaagaggatcccgcacttctcctccctacctctggacgatcaggtcatactgctgcgg
gcaggctggaacgagctcctcattgcgtccttctcccatcggtccattgatgtccgagat
ggcatcctcctggccacgggtcttcatgtgcacagaaactcagcccattccgcaggcgtg
ggagccatctttgatcgggtgctgacagagctagtgtccaaaatgcgtgacatgaggatg
gacaagacagagcttggctgcctgcgggcaatcatactgtttaatccagacgccaagggc
ctctccaaccctggagaggtggagatccttcgggagaaggtgtacgcctcactggagacc
tattgcaagcagaagtaccctgagcagcagggccggtttgccaagctgctgttacgtctt
cctgccctccgctccatcggcctcaagtgtctggagcacctgttcttcttcaagctcatt
ggcgacacccccattgacaccttcctcatggagatgcttgaggctccccaccagctagcc
tga
Mus musculus (house mouse): 20183
Help
Entry
20183 CDS
T01002
Symbol
Rxrg, Nr2b3
Name
(RefSeq) retinoid X receptor gamma
KO
K08526
retinoid X receptor gamma
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03320
PPAR signaling pathway
mmu04659
Th17 cell differentiation
mmu04919
Thyroid hormone signaling pathway
mmu04920
Adipocytokine signaling pathway
mmu04928
Parathyroid hormone synthesis, secretion and action
mmu05200
Pathways in cancer
mmu05202
Transcriptional misregulation in cancer
mmu05207
Chemical carcinogenesis - receptor activation
mmu05216
Thyroid cancer
mmu05222
Small cell lung cancer
mmu05223
Non-small cell lung cancer
mmu05226
Gastric cancer
mmu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
20183 (Rxrg)
09152 Endocrine system
04920 Adipocytokine signaling pathway
20183 (Rxrg)
03320 PPAR signaling pathway
20183 (Rxrg)
04919 Thyroid hormone signaling pathway
20183 (Rxrg)
04928 Parathyroid hormone synthesis, secretion and action
20183 (Rxrg)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
20183 (Rxrg)
05202 Transcriptional misregulation in cancer
20183 (Rxrg)
05207 Chemical carcinogenesis - receptor activation
20183 (Rxrg)
09162 Cancer: specific types
05226 Gastric cancer
20183 (Rxrg)
05216 Thyroid cancer
20183 (Rxrg)
05222 Small cell lung cancer
20183 (Rxrg)
05223 Non-small cell lung cancer
20183 (Rxrg)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
20183 (Rxrg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
20183 (Rxrg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmu03310
]
20183 (Rxrg)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
20183 (Rxrg)
Nuclear receptors [BR:
mmu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
20183 (Rxrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
CRT10
Motif
Other DBs
NCBI-GeneID:
20183
NCBI-ProteinID:
NP_033133
MGI:
98216
Ensembl:
ENSMUSG00000015843
UniProt:
P28705
LinkDB
All DBs
Position
1:167425902..167467191
Genome browser
AA seq
463 aa
AA seq
DB search
MYGNYSHFMKFPTGFGGSPGHTGSTSMSPSVALPTGKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSSHEDMPVERIL
EAELAVEPKTESYGDMNVENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDSFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaattattcccacttcatgaagtttcccaccggctttggtggctcccctggt
cacactggctcgacgtccatgagcccttcagtagccttgcccacggggaagccaatggac
agccaccccagctacacagacaccccagtgagtgcccctcggacgctgagtgctgtggga
acccccctcaatgctcttggctctccgtatagagtcatcacttctgccatgggtccaccc
tcaggagcactggcagctcctccaggaatcaacttggtggctccacccagctcccagcta
aatgtggtcaacagtgtcagcagctctgaggacatcaagcccttaccaggtctgcctggg
attggaaatatgaactacccatccaccagccctgggtctctggtgaaacacatctgtgcc
atctgtggggacagatcctcagggaagcactacggtgtgtacagctgtgaaggttgcaaa
ggcttcttcaaaaggaccatcaggaaagatctcatctacacctgtcgggataacaaagat
tgtctcatcgacaagcgccagcgcaaccgctgccagtactgtcgctaccagaagtgcctg
gtcatgggcatgaagcgggaagctgtgcaagaagaaaggcagaggagccgagagcgagca
gagagtgaggcagaatgtgccagtagtagccacgaagacatgcccgtggagaggattcta
gaagccgaacttgctgtggaaccaaagacagaatcctacggtgacatgaacgtggagaac
tcaacaaatgaccctgttaccaacatatgccatgctgcagataagcaacttttcaccctc
gttgagtgggccaaacgcatcccccacttctcagatctcaccttggaggaccaggtcatt
ctactccgggcagggtggaatgaactgctcattgcctccttctcccaccgctcggtttcc
gtccaggatggcatcctgctggccacgggcctccacgtgcacaggagcagcgctcacagc
gcgggagtcggctccatcttcgacagagtccttacagagttggtgtccaagatgaaagac
atgcagatggataagtcagagctggggtgcctacgggccatcgtgctgtttaacccagat
gccaagggtttatccaacccctctgaggtggagactcttcgagagaaggtttatgccacc
ctggaggcctataccaagcagaagtatccggaacagccaggcaggtttgccaagcttctg
ctgcgtctccctgctctgcgctccatcggcttgaaatgcctggaacacctcttcttcttc
aagctcattggagacactcccatcgacagcttcctcatggagatgttggagaccccactg
cagatcacctga
DBGET
integrated database retrieval system