Mus musculus (house mouse): 20239
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Entry
20239 CDS
T01002
Symbol
Atxn2, 9630045M23Rik, ATX2, Sca2
Name
(RefSeq) ataxin 2
KO
K23625
ataxin 2/2L
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu05014
Amyotrophic lateral sclerosis
mmu05017
Spinocerebellar ataxia
mmu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
20239 (Atxn2)
05017 Spinocerebellar ataxia
20239 (Atxn2)
05022 Pathways of neurodegeneration - multiple diseases
20239 (Atxn2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
20239 (Atxn2)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
20239 (Atxn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
20239
NCBI-ProteinID:
NP_033151
MGI:
1277223
Ensembl:
ENSMUSG00000042605
UniProt:
O70305
E9QM77
Q3UX07
LinkDB
All DBs
Position
5:121849794..121954372
Genome browser
AA seq
1136 aa
AA seq
DB search
MSLKPQPQPPAPATGRKPGGGLLSSPGAAPASAAVTSASVVPAPAAPVASSSAAAGGGRP
GLGRGRNSSKGLPQPTISFDGIYANVRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPK
CDLVLDAAHEKSTESSSGPKREEIMESVLFKCSDFVVVQFKDTDSSYARRDAFTDSALSA
KVNGEHKEKDLEPWDAGELTASEELELENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSS
YTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNCSDR
EGHGPNTRDNKYIPPGQRNREVLSWGSGRQSSPRMGQPGPGSMPSRAASHTSDFNPNAGS
DQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSA
HGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSMSSGLEFVSHNPPSEAAAP
PVARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQSSIGNSPSGPVLASPQAGIIPAEAVS
MPVPAASPTPASPASNRALTPSIEAKDSRLQDQRQNSPAGSKENVKASETSPSFSKADNK
GMSPVVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLSKNREGEKSRDLIKDKTEASAK
DSFIDSSSSSSNCTSGSSKTNSPSISPSMLSNAEHKRGPEVTSQGVQTSSPACKQEKDDR
EEKKDTTEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPAPVYT
QPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMM
HPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMM
APPAHAQPGLVSSSAAQFGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPN
AALHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAG
LAPTPPSMTPASNTQSPQSSFPAAQQTVFTIHPSHVQPAYTTPPHMAHVPQAHVQSGMVP
SHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagccgcagccgcagccgcccgcgcccgccactggccgcaagcccggcggc
ggcctgctctcgtcgcccggcgccgcgccggcctcggccgcggtgacctcggcttccgtg
gtgccggccccggccgcgccggtggcgtcttcctcggcggccgcgggcggcgggcgtccc
ggcctgggcagaggtcggaacagtagcaaaggactgcctcagcctacgatttcttttgat
ggaatctatgcaaacgtgaggatggttcatatacttacgtcagttgttggatcgaaatgt
gaagtacaagtgaaaaacggaggcatatatgaaggagtttttaaaacatacagtcctaag
tgtgacttggtacttgatgctgcacatgagaaaagtacagaatccagttcggggccaaaa
cgtgaagaaataatggagagtgttttgttcaaatgctcagacttcgttgtggtacagttt
aaagatacagactccagttatgcacggagagatgcttttactgactctgctctcagcgca
aaggtgaatggtgagcacaaggagaaggacctggagccctgggatgcaggggagctcacg
gccagcgaggagctggagctggagaatgatgtgtctaatggatgggaccccaatgacatg
tttcgatataatgaagagaattatggtgtggtgtccacatatgatagcagtttatcttca
tatacggttcctttagaaagggacaactcagaagaatttcttaaacgggaggcaagggca
aaccagttagcagaagaaattgaatccagtgctcagtacaaagctcgtgtcgcccttgag
aatgatgaccggagtgaggaagaaaaatacacagcagtccagagaaactgcagtgaccgg
gaggggcatggccccaacactagggacaataaatatattcctcctggacaaagaaacaga
gaagtcctatcctggggaagtgggagacagagctcaccacggatgggccagcctgggcca
ggctccatgccgtcaagagctgcttctcacacttcagatttcaacccgaacgctggctca
gaccaaagagtagttaatggaggtgttccctggccatcgccttgcccatctccttcctct
cgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacccct
acacggccgccctccaggcccccctcgaggccctccagacccccgtctcacccctctgct
catggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaaggaccccca
aggatgtctccaaaggcacagcgccaccctcggaatcacagagtctctgctgggagaggc
tccatgtctagtggcctagaatttgtatcccacaatcccccaagtgaagcagctgctcct
ccagtggcaaggaccagtcctgcagggggaacgtggtcctcagtggtcagtggggttcca
aggttatctcccaaaactcacagacccaggtctcccaggcagagcagcattggaaactct
cccagcgggcctgtgcttgcttctccccaagctggcatcatccctgcagaagccgtttcc
atgcctgttcccgccgcatctccgactcctgccagccctgcatccaacagagcactgacc
ccatctattgaggcaaaagattccaggcttcaagatcagaggcagaactctcctgcaggg
agtaaagaaaatgttaaagcaagtgaaacatcacctagcttttcaaaagctgacaacaaa
ggtatgtcaccagttgtttctgaacacagaaaacagattgatgacttaaagaagtttaag
aatgattttaggttacagccaagctctacatctgaatctatggatcaactactaagcaaa
aatagagaaggagaaaagtcacgagatttgattaaagataaaacggaagcaagtgctaag
gatagtttcattgacagcagcagcagcagcagcaactgtaccagtggcagcagcaagacc
aacagccctagcatctccccttccatgcttagtaatgcagagcacaagagggggcctgag
gtcacatcccaaggggtgcagacttccagcccagcctgcaaacaagagaaggatgacaga
gaagagaagaaagacacaacagagcaggttaggaaatcgacattgaatcccaatgcaaag
gagttcaaccctcgttctttctctcagccaaagccttctactaccccaacgtcacctcgg
cctcaagcacaacccagcccatctatggtgggtcatcagcagccagctccagtgtacact
cagcctgtgtgcttcgcacccaatatgatgtatcccgtcccagtgagcccgggcgtacaa
cctttatacccaatacctatgacgcccatgcctgtgaaccaagccaagacatatagagca
ggtaaagtaccaaatatgccccaacagcgacaagaccaacatcatcaaagcaccatgatg
cacccagcctccgcggcagggccacccatcgtagccaccccgcccgcttactccactcag
tacgttgcctacagccctcagcagtttcccaatcagcctttggtccagcatgtgccgcat
tatcagtctcagcatcctcatgtgtacagtcctgtcatacaaggtaatgccaggatgatg
gcaccaccagcacatgctcagcctggtttagtgtcttcttcagctgctcagttcggggct
cacgagcagacgcacgccatgtatgcatgtcccaaattaccatacaacaaggagacaagc
ccttctttctactttgccatttccaccggctccctcgctcagcagtatgcacatcctaat
gccgccctgcatccacatactccccatcctcagccttcggccactcccaccggacagcag
caaagccagcatggtggaagtcaccctgcacccagtcctgttcagcaccatcagcaccag
gctgcccaggctcttcatctggccagtccacagcagcagtcggccatttatcatgcgggg
ctggcaccaacaccaccttccatgacacctgcctctaatacacagtctccacagagcagt
ttcccagcagcacaacagacagtcttcaccatccacccttctcatgttcagccggcatac
accaccccaccccacatggcccacgtacctcaggctcatgtacagtcaggaatggttcct
tctcatccaactgcccatgcgccaatgatgctaatgacgacacagccacccggcggtccc
caggccgccctcgctcaaagtgcactacagcccattccagtctcgacaacagcgcatttc
ccttatatgacgcacccttcagtacaagcccaccaccaacagcagttgtaa
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