Mus musculus (house mouse): 20347
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Entry
20347 CDS
T01002
Symbol
Sema3b, SemA, Semaa, sema5, semaV
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
KO
K06840
semaphorin 3
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
20347 (Sema3b)
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
PSI
Ig_3
V-set
Ig_6
I-set
Motif
Other DBs
NCBI-GeneID:
20347
NCBI-ProteinID:
NP_001036244
MGI:
107561
Ensembl:
ENSMUSG00000057969
UniProt:
M9MMK0
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Position
9:complement(107474868..107486440)
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AA seq
749 aa
AA seq
DB search
MGRAEAAAMIPGLALLWVAGLGDTAPNLPRLRLSFQELQARHGVRTFRLERTCCYEALLV
DEERGRLFVGAENHVASLSLDNISKRAKKLAWPAPVEWREECNWAGKDIGTECMNFVKLL
HTYNHTHLLACGTGAFHPTCAFVEVGHRLEEPMLQLDRRKLEDGKGKTPYDPRHRAASVL
VGEELYSGVTADLMGRDFTIFRSLGQNPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDD
KIYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEG
DTHFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPFAHKEG
PTHQWVSYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPMGGRPL
FLQVGAGYTFTQIAADRVAAADGHYDVLFIGTDVGTVLKVISVPKGSRPNSEGLLLEELQ
VFEDSAAITSMQISSKRQQLYIASRSAVAQIALHRCTALGRACAECCLARDPYCAWDGSA
CTRFQPTAKRRFRRQDIRNGDPSTLCSGDSSHSVLLEKKVLGVESGSAFLECEPRSLQAH
VQWTFQGAGEAAHTQVLAEERVERTARGLLLRGLRRQDSGVYLCVAVEQGFSQPLRRLVL
HVLSAAQAERLARAEEAAAPAPPGPKLWYRDFLQLVEPGGGGGANSLRMCRPQPGHHSVA
ADSRRKGRNRRMHVSELRAERGPRSAAHW
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggctgaggccgccgccatgatcccaggcctggcccttctctgggtagcaggg
ctaggggatactgcccctaaccttccccgccttcggctctcctttcaagaattacaggcc
cggcatggtgtccgaaccttcaggctggagcggacctgctgttatgaagccttgctggtg
gatgaggagcgtggacgcctgtttgtgggtgctgagaaccacgtggcttccctcagcctg
gacaacatcagcaagcgagccaagaagctggcctggcccgcccccgtggaatggcgtgaa
gaatgcaactgggcagggaaggacattggtaccgagtgcatgaacttcgtgaagctgctg
cacacctacaaccacacccacttgctggcctgtggcacaggggctttccacccaacctgt
gcctttgtggaggtgggccaccggctggaggaacccatgcttcaactggaccggaggaaa
cttgaggacggcaaggggaagactccttatgacccaaggcatcgggctgcctcggtgctg
gtgggggaagaactgtattctggggtgacagcagaccttatgggccgggactttaccatc
tttcgaagccttggtcagaatccgagtctccgaacagagccccatgattcccgctggctc
aatgaacccaagtttgtcaaggtcttttggatcccagagagtgagaaccctgatgacgat
aaaatctatttcttcttccgcgagtccgctgtggaagcagcaccagcaatggggcgcatg
tctgtgtctcgtgttggccagatctgcaggaatgacctgggtggccagcggagcttggtc
aacaaatggaccacatttctgaaggcgcggcttgtgtgctcagtacctggagttgagggt
gacacccactttgaccaacttcaggatgttttccttctgtcctcccgagaccgccagaca
cctcttctctatgctgtcttctccacctccagtggtgtcttccagggctctgctgtgtgc
gtgtacagcatgaacgatgtgcgccgagccttcttgggaccttttgctcacaaagagggg
cctacacaccagtgggtgtcctaccagggtcgtgtcccctacccaagacctggcatgtgc
cccagcaagacctttggcaccttcagctccaccaaggacttcccagatgacgttatccag
tttgctcggaaccaccctctcatgtacaacccagtcctgcccatgggggggcgccctctc
ttcctacaagtgggagctgggtacaccttcacccaaatcgccgcagaccgagtagcagct
gccgatggacactacgatgttctcttcattggtacagatgtgggcacagtgctgaaagtg
atctcagtccccaaaggcagccgacctaattctgaaggacttctcctggaagagctgcag
gtgttcgaggactctgccgctatcaccagcatgcaaatctcctctaaaaggcaacaactc
tacatagcatcgcgcagcgcagtggcccagattgctttgcatcgctgcactgccctaggc
cgcgcctgcgcagaatgctgcttggcccgtgatccttactgcgcctgggatggatcagct
tgcacacgcttccagcctacggccaagagacggttccggaggcaagacataaggaatggc
gaccccagcaccctatgctctggagactcttctcactctgtgctgctggagaagaaggtg
ttgggtgtggagagcggcagcgcgtttctggagtgtgagccccgctcgctccaggcgcat
gtgcagtggaccttccaaggtgcaggggaggcagctcacacccaggtgctggctgaggag
agagtagagcgcactgcgcgggggctgctgttgcgggggctgcggcgccaggactctggc
gtgtatctttgcgtcgcggttgaacaaggcttttcacaaccactgcgtcgcctggtgctg
catgtgttgagtgcggcgcaggctgaacgactggcacgggcagaggaagcagccgctcct
gcacctcctggccctaaactctggtaccgggactttctgcagttggtggagccaggcggt
ggcggaggtgcaaactccctgcgaatgtgccgcccgcagcccgggcaccactctgtggca
gcagattcacgtcgtaagggtcgcaacagacggatgcatgtctctgagctccgtgctgag
cgtggaccacgtagtgcagctcactggtga
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