Mus musculus (house mouse): 20360
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Entry
20360 CDS
T01002
Symbol
Sema6c, Semay, mKIAA1869
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
KO
K06842
semaphorin 6
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
20360 (Sema6c)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
20360
NCBI-ProteinID:
NP_035481
MGI:
1338032
Ensembl:
ENSMUSG00000038777
UniProt:
Q9WTM3
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All DBs
Position
3:95067731..95081361
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AA seq
931 aa
AA seq
DB search
MPRAPHSMPLLLLLLLLSSLPQAQAAFPQDPTPLLTSDLQGASPSSWFRGLEDDAVAAEL
GLDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKFLTWRSQDMENCAVRGKLTD
ECYNYIRVLVPWNSQTLLACGTNSFSPMCRSYGITSLQQEGEELSGQARCPFDATQSTVA
IFAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFF
FREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDV
LQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTP
VSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTS
RALLTQVAVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGSEPIVLEEIDAYSHARC
SGKRSPRAARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGW
HRSRGCMSIRGPGGTDVDLTGNQESTEHGDCQDGATGSQSGPGDSAYGVRRDLSPASASR
SIPIPLLLACVAAAFALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHG
GGPEPPPPPKDGDAAQTPQLYTTFLPPPDGGSPPELACLPTPETTPELPVKHLRASGGPW
EWNQNGNNASEGPGRPPRGCSGAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQ
PPRKGSEPLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPSGRPA
LSAPAPRLGVGGSRRLPFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPEGHRGRS
LKRVDVKSPLSPKPPLASPPQPAPHGGHFNF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgccccccactccatgcccctgctgctcctgctgctgttgctgtcatcgctc
ccccaagcccaggctgcctttccccaggaccccacccctctgttgacctctgaccttcaa
ggtgcctctccatcatcctggttccggggcctggaggacgatgctgtggctgcggaactt
gggctggactttcagagattcctgaccttgaaccggaccttgcttgtggctgcccgggat
cacgttttctccttcgatcttcaagcccaagaagaaggggaggggctggtgcccaacaag
tttctgacatggaggagtcaagatatggagaactgtgcagtccggggaaagctgacggac
gaatgctacaactacatccgtgttcttgttccctggaactcgcagacacttcttgcctgt
ggaacaaattccttcagccctatgtgccgcagctatgggataacatctctgcaacaggag
ggtgaggagctgagtgggcaggctcgatgcccctttgatgccacccagtccactgtggcc
atctttgcagagggcagtttgtactcagccacagcagcagatttccaggccagtgatgct
gtagtttacagaagtcttggacctcagcctccactccgttctgcaaagtatgactccaag
tggcttcgagagccacactttgtctatgcgttggagcatggagagcacgtctacttcttc
ttccgagaagtctctgtggaggatgcccgcttagggagggtgcagttttccagggtagcc
cgggtatgtaaacgtgacatgggtggctcacctcgggccttggatcgccactggacatcc
ttccttaagctgaggctcaactgctctgtccctggggactctaccttctactttgacgtc
ttacagtccttaactgggcctgtgaacctgcatggccgctccgctctctttggggtcttc
actactcagaccaatagcattcctgggtctgcagtctgcgccttctacctagatgatatt
gaacgtggctttgagggcaagttcaaggagcagaggagtctggatggggcctggactcct
gtgtctgaggacaaggtcccctcacccaggccagggtcctgtgcaggtgtgggtgcagct
gcctcgttctcctcctctcaagacctacctgatgatgtcctgctcttcatcaaggcacac
ccgctgctggatcctgctgtgccacccgccacccatcaaccgctcctcactctgactagc
agggccctgctgacccaggtagctgtggacggaatggctggtccccacagaaatactact
gtcctgtttcttggctccaacgatgggacagtgctgaaggtgctacctccagggggtcag
tctttgggctctgagcctatcgtcttggaagagattgatgcctacagccatgcccggtgc
agtgggaagcggtcaccccgagctgcgcggcggatcatagggctggagctggacactgag
ggtcacaggctttttgtggcctttcctggatgtatcgtctacctctctctcagccggtgt
gcccggcatggagcatgtcagaggagctgcctggcttctctggacccatactgtggatgg
catcgatccagaggctgcatgagtatcaggggacctggtgggactgatgtcgatctgact
gggaaccaggaatccacagagcacggtgactgccaagatggagcgaccgggagtcagtct
ggccctggagattctgcttatggcgtgcgcagggacctttccccagcctcagcctcccga
tccattcccatcccactcctcctggcctgtgtggccgcggccttcgctttgggcgcctca
gtctccggtctcttggtgtcctgtgcttgtcgtcgcgcgaaccgccgtcggagcaaggac
atcgagaccccggggctgccgcgccccctctcccttcgcagcctggcccggctgcacggt
ggcggtcctgagcccccgcctccgcccaaggatggagatgcagcgcaaacgccccagctc
tacactaccttcctgcctccgcccgacggcggatccccaccggagctggcctgcctaccc
acgccggagacgacgcccgagctgcccgtgaagcacctccgtgcctccgggggcccctgg
gaatggaaccagaatgggaacaacgcctcggagggcccaggccgcccaccacggggctgc
agcggggcgggcgggcccgcaccgcgagtgctggtgaggccaccgccccctggctgcccc
gggcaggcggtagaggtgaccacgctggaggaactgctgcgctacctgcacggccctcag
ccgcccaggaagggtagcgaacctctcgcctccgccccgttcacctcccggccgcccgcc
tcggagcccggcgcctcgctgttcgtggactccagcccgatgccgcgggatggcgttccg
ccgctcaggctcgacgtgccacccgaaggcaagcgcgctgccccgagcgggcggcctgct
ctctcggccccagccccgcgcctgggtgtcggcggcagccgccgattgccctttcccaca
caccgggcgcccccgggcctgctcacgcgagtgccctcgggaggcccggccaggtactcc
ggggggcccgggaggcacctcctgtacctgggccggcccgaaggccatcgcggccgctcc
ctgaagagggtggacgtgaagtctccgctgtcgcccaagccgcccctcgcctccccgccg
cagcccgccccgcacggtggtcatttcaacttctga
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