Mus musculus (house mouse): 20423
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Entry
20423 CDS
T01002
Symbol
Shh, 9530036O11Rik, Dsh, Hhg1, Hx, Hxl3, M100081, ShhNC
Name
(RefSeq) sonic hedgehog protein precursor
KO
K11988
sonic hedgehog
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04340
Hedgehog signaling pathway
mmu04360
Axon guidance
mmu05200
Pathways in cancer
mmu05205
Proteoglycans in cancer
mmu05217
Basal cell carcinoma
mmu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
20423 (Shh)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
20423 (Shh)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
20423 (Shh)
05205 Proteoglycans in cancer
20423 (Shh)
09162 Cancer: specific types
05226 Gastric cancer
20423 (Shh)
05217 Basal cell carcinoma
20423 (Shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmu01002
]
20423 (Shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmu00536
]
20423 (Shh)
Peptidases and inhibitors [BR:
mmu01002
]
Cysteine peptidases
Family C46: hedgehog family
20423 (Shh)
Glycosaminoglycan binding proteins [BR:
mmu00536
]
Heparan sulfate / Heparin
Morphogens
20423 (Shh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
VldE
Vint
DrmE_C
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
20423
NCBI-ProteinID:
NP_033196
MGI:
98297
Ensembl:
ENSMUSG00000002633
UniProt:
Q62226
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:complement(28661838..28672099)
Genome browser
AA seq
437 aa
AA seq
DB search
MLLLLARCFLVILASSLLVCPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPG
VKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSDFL
TFLDRDEGAKKVFYVIETLEPRERLLLTAAHLLFVAPHNDSGPTPGPSALFASRVRPGQR
VYVVAERGGDRRLLPAAVHSVTLREEEAGAYAPLTAHGTILINRVLASCYAVIEEHSWAH
RAFAPFRLAHALLAALAPARTDGGGGGSIPAAQSATEARGAEPTAGIHWYSQLLYHIGTW
LLDSETMHPLGMAVKSS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctggccagatgttttctggtgatccttgcttcctcgctgctggtgtgc
cccgggctggcctgtgggcccggcagggggtttggaaagaggcggcaccccaaaaagctg
acccctttagcctacaagcagtttattcccaacgtagccgagaagaccctaggggccagc
ggcagatatgaagggaagatcacaagaaactccgaacgatttaaggaactcacccccaat
tacaaccccgacatcatatttaaggatgaggaaaacacgggagcagaccggctgatgact
cagaggtgcaaagacaagttaaatgccttggccatctctgtgatgaaccagtggcctgga
gtgaagctgcgagtgaccgagggctgggatgaggacggccatcattcagaggagtctcta
cactatgagggtcgagcagtggacatcaccacgtccgaccgggaccgcagcaagtacggc
atgctggctcgcctggctgtggaagcaggtttcgactgggtctactatgaatccaaagct
cacatccactgttctgtgaaagcagagaactccgtggcggccaaatccggcggctgtttc
ccgggatccgccaccgtgcacctggagcagggcggcaccaagctggtgaaggacttacgt
cccggagaccgcgtgctggcggctgacgaccagggccggctgctgtacagcgacttcctc
accttcctggaccgcgacgaaggcgccaagaaggtcttctacgtgatcgagacgctggag
ccgcgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgcacaacgac
tcggggcccacgcccgggccaagcgcgctctttgccagccgcgtgcgccccgggcagcgc
gtgtacgtggtggctgaacgcggcggggaccgccggctgctgcccgccgcggtgcacagc
gtgacgctgcgagaggaggaggcgggcgcgtacgcgccgctcacggcgcacggcaccatt
ctcatcaaccgggtgctcgcctcgtgctacgctgtcatcgaggagcacagctgggcacac
cgggccttcgcgcctttccgcctggcgcacgcgctgctggccgcgctggcacccgcccgc
acggacggcgggggcgggggcagcatccctgcagcgcaatctgcaacggaagcgaggggc
gcggagccgactgcgggcatccactggtactcgcagctgctctaccacattggcacctgg
ctgttggacagcgagaccatgcatcccttgggaatggcggtcaagtccagctga
DBGET
integrated database retrieval system
