| Entry |
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| Symbol |
Smarca4, BAF190A, Brg1, HP1-BP72, SNF2beta, SW1/SNF, b2b508.1Clo, b2b692Clo
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| Name |
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
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| KO |
| K11647 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] |
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| Organism |
mmu Mus musculus (house mouse)
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| Pathway |
| mmu03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:mmu00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
20586 (Smarca4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
20586 (Smarca4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
20586 (Smarca4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mmu03021]
20586 (Smarca4)
03036 Chromosome and associated proteins [BR:mmu03036]
20586 (Smarca4)
Transcription machinery [BR:mmu03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
20586 (Smarca4)
Chromosome and associated proteins [BR:mmu03036]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
20586 (Smarca4)
Chromatin remodeling factors
BAF complex
20586 (Smarca4)
PBAF complex
20586 (Smarca4)
GBAF(ncBAF) complex
20586 (Smarca4)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:21527377..21615526
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| AA seq |
1613 aa
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPMPTQG
PGGYPQDNMHQMHKPMESMHEKGMPDDPRYNQMKGMGMRSGAHTGMAPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGSDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPLVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEE
DEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAE
VERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKR
KRDSEAGSSTPTTSTRSRDKDEESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYK
DSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQ
NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVK
VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED |
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| NT seq |
4842 nt +upstreamnt +downstreamnt
atgtctactccagacccacccttgggtgggactcctcggcctggtccttccccaggccct
ggtccttcacctggtgcaatgctgggtcctagccctggcccctcaccaggttctgcccac
agcatgatggggccaagcccaggacctccttcagcaggacatcccatgcccacccagggg
cctggagggtacccccaggacaacatgcatcagatgcacaagcctatggagtccatgcac
gagaagggcatgcctgatgacccacgatacaaccagatgaaagggatgggcatgcggtca
ggggcccacacaggcatggcacctccacctagtcccatggaccagcattctcaaggttac
ccctcacccctcggcggctctgaacatgcctccagtcctgtcccagccagtggcccatct
tcaggcccccagatgtcctctgggccaggaggggccccactagatggttctgatccccag
gccttgggacagcaaaacagaggcccaaccccatttaaccagaaccagctgcatcaactc
agagctcagataatggcctacaagatgttggccaggggccagccattgcccgaccacctg
cagatggccgtgcaaggcaagcggccgatgcctggaatgcagcaacagatgccaacacta
cctccaccctcagtgtccgccacaggacccggacctggacccggccctggccctggccct
ggcccaggaccagcccctccaaattacagtagaccccatggtatgggagggcccaacatg
cctcccccaggaccctcaggtgtgccccccgggatgcctggtcagccgcctggagggcct
cccaagccatggcctgaaggacccatggccaatgctgctgcccccacaagcaccccacag
aagctgattcctccgcaaccaacaggccgtccttcacctgcacctcctgctgtcccgcct
gctgcctcacctgtaatgccaccacaaacacagtccccagggcagccagcccagcctgct
ccattggtgccactgcaccagaagcagagccgaatcacccccatccagaagccccgaggc
cttgaccctgtggagatcctacaagagcgggagtacaggcttcaggctcgaatcgcacac
agaattcaggaacttgaaaacctccctgggtccctggctggggaccttcgaaccaaagca
accatcgaactcaaggcccttaggttgctgaacttccagaggcagctgcgccaggaggtg
gtggtgtgcatgcgaagagacacagccctggagacagccctcaatgccaaggcctacaag
cgcagcaaacgtcagtcactacgggaggcccgcatcactgagaagttggagaagcagcag
aagattgaacaggagcgcaagcgccgccagaagcaccaggagtacctcaacagcattctg
cagcatgccaaggacttcagggagtatcacagatcagtcacaggcaaactccagaaactc
accaaggctgtggccacctaccatgccaacactgagcgggagcagaagaaagaaaatgag
cgcattgagaaggagcgaatgcggaggcttatggctgaagatgaggagggctaccgcaaa
ctcattgaccagaagaaggacaagcgcctggcctaccttctgcagcagacagatgagtat
gtggccaacctcacagagctggtgcggcagcacaaagctgcccaggttgccaaggagaag
aagaagaaaaagaaaaagaagaaggcagaaaatgctgaaggacagacacctgctattgga
ccagatggtgagcctctggatgagaccagccagatgagtgacctccctgtgaaggtgatc
cacgtggagagtggcaagatcctcactggcacagatgccccaaaagccgggcagctggaa
gcctggcttgaaatgaacccagggtatgaagtagcccccaggtcagacagtgaagaaagt
ggctctgaagaggaggaggaggaggaggaagaggagcagcctcagcccgcacagccccct
acactgcctgtggaagaaaagaagaagattccagacccagacagcgatgatgtctctgag
gtggacgcccgacacattattgagaacgccaagcaagatgtggacgatgagtacggtgtg
tcccaggcccttgctcgtggcctgcagtcttactatgctgtggcccatgcagtcacagag
agagtagataagcagtccgccctcatggtcaacggtgtcctcaaacagtaccagatcaag
ggtttggagtggctggtgtccctgtacaacaacaacctgaatggcatcctggctgatgag
atggggctggggaagaccatccagaccatcgcgctcatcacatacctcatggagcacaag
cgcatcaacgggcctttcctcatcatcgtgcctctctcgacactgtcaaactgggcgtat
gaatttgacaagtgggccccctctgtggtgaaggtttcttacaagggctctccagctgca
aggcgagcttttgtcccacagcttcgcagtgggaagttcaacgtcttactgaccacctat
gaatatatcatcaaagacaagcatatcctagccaagatccgctggaagtacatgattgtg
gatgaaggccaccgcatgaaaaaccaccactgcaagttgacgcaggtccttaacacacac
tacgtggcccctcggcgcctgcttcttacaggcacaccactgcagaacaagctaccggag
ctctgggccctgcttaacttcctgctccccactatcttcaagagctgcagcaccttcgaa
cagtggttcaatgcaccctttgccatgactggagaaaaggtggacctgaatgaagaggag
actatcctcattattcgtcgcctacacaaagttctgcggcccttcctgctgcggcggctc
aagaaggaagttgaagcccagctccctgagaaggtagagtatgtcatcaaatgcgacatg
tcagccctgcagcgtgtgctgtaccgtcacatgcaggccaaaggtgtgctgctgactgac
ggctccgagaaggacaagaagggcaaaggtggcaccaagacactgatgaacactattatg
caactgcgtaagatctgcaaccacccctacatgttccagcacatcgaggagtccttttct
gagcacttggggttcaccggcggcatcgtgcaaggattggacctttaccgtgcctcaggg
aaatttgaacttcttgatagaattctacccaaactccgtgcaacgaaccataaagtgctc
ctcttttgccaaatgacctccctcatgaccatcatggaagactactttgcataccgtggc
ttcaaatacctcaggcttgatggaaccacaaaagcagaagaccggggcatgctgttgaaa
acctttaatgaacctggctctgagtatttcattttcctgctcagtacccgtgctgggggg
ctgggcctgaatctgcagtcagctgacactgtgatcatctttgacagtgactggaatccc
caccaggacctgcaagcacaggatcgagcccatcgcattggacagcagaatgaggtgcgt
gttcttcgcctgtgcacggtcaacagtgtggaagagaagatactggctgctgccaaatac
aaactcaatgtggatcagaaggtgatccaggcaggcatgttcgaccagaagtcgtccagc
catgagaggcgtgccttcctgcaggccatcctggagcacgaggagcaggatgaggaggaa
gatgaggtgcctgatgatgagaccgtcaaccagatgattgcccggcacgaagaagagttt
gacctcttcatgcgcatggacttggaccgccggcgtgaagaagcccgcaaccccaagcgg
aagccacgcctgatggaagaggatgagctcccatcctggatcatcaaggatgatgccgag
gtggagcggctgacatgtgaagaggaagaggagaagatgttcggccgtggttctcgccac
cgcaaggaggtagactacagcgactcactgacagagaagcagtggctcaaggctatcgag
gagggcacgctggaggagatcgaagaggaggtccggcagaagaaatcttcacgtaagcgt
aagcgagacagcgaggccggctcctccaccccgaccaccagcacccgcagccgtgacaag
gatgaggagagcaagaagcagaagaaacgtgggcggccacctgctgagaagctgtcccca
aacccacctaacctcaccaagaagatgaagaagatcgtggatgctgtgatcaagtacaaa
gacagcagtggacgtcagctcagcgaggtgttcatccagctcccctctcgcaaggagctt
cctgagtactatgagctcatccgaaagcctgtggacttcaagaagatcaaggaacgcatc
cgaaaccacaagtaccgcagcctcaatgacctggagaaggatgtgatgctgctgtgccag
aacgctcagacgttcaacctcgagggttccctgatctatgaggactccatcgtcctgcag
tctgtcttcaccagcgtacggcagaagattgagaaggaggacgacagtgaaggcgaggaa
agcgaggaggaggaggagggcgaggaggaaggctccgagtctgagtcccgctccgtcaag
gtgaagatcaagctgggccgcaaggagaaggcccaggaccgactcaaggggggccgccgg
cggccaagccggggatcccgggccaagccggttgtgagtgacgatgacagtgaggaggag
caggaggaggaccgctcaggaagtggcagtgaggaagactga |
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