Mus musculus (house mouse): 20833
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Entry
20833 CDS
T01002
Symbol
Ssrp1, Hmg1-rs1, Hmgi-rs3, Hmgox, T160
Name
(RefSeq) structure specific recognition protein 1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
20833 (Ssrp1)
03036 Chromosome and associated proteins [BR:
mmu03036
]
20833 (Ssrp1)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
20833 (Ssrp1)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
20833 (Ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
20833
NCBI-ProteinID:
NP_001129553
MGI:
107912
Ensembl:
ENSMUSG00000027067
UniProt:
Q08943
LinkDB
All DBs
Position
2:84867519..84877453
Genome browser
AA seq
708 aa
AA seq
DB search
MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKREQLKRAKMAKDRKSRRKSSEAKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA
EDARREYEKAMKEYEGGRGDSSKRDKSKKKKKVKAKMEKKSTPSRGSSSKSSSRQLSDSF
KSKEFVSSDESSSGENKSKKKRRRSEDSEEELASTPPSSEDSASGSDE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacattggagttcaacgacatcttccaggaggtgaaagggtccatgaatgat
gggaggcttcgattgagccgtcagggtatcatctttaagaacagcaagacgggcaaagtg
gacaacatccaggctggggagttgacagaaggcatctggcgtcgggtagcattaggccat
gggcttaaactgctcacaaagaatgggcatgtctacaagtacgatggcttccgcgaatcg
gagtttgagaaactctctgacttcttcaaaactcactatcgccttgagctaatggagaag
gatctgtgtgtgaagggctggaactgggggacagtgaagtttggaggacagctgctttct
tttgacattggtgatcaaccagtctttgagatacccctaagcaatgtgtcccagtgtacc
acaggcaagaatgaggtgaccctggaattccaccagaatgacgatgctgaagtatctctc
atggaggtgcgcttctatgttcctcccacgcaggaagatggtgtggaccctgtggaggcc
tttgcccagaatgttctgtcaaaggcagatgtgatccaggccaccggagacgccatctgc
atcttccgggagctgcagtgtttgactcctcgcggtcgatacgatatccggatctaccct
acctttctacacctgcatggcaagacctttgactacaagatcccctatactacagttctc
cgtctcttcctgctaccacacaaggatcagagacagatgttctttgtgatcagcttggat
cctcccatcaagcagggccaaactcgttaccacttcctgatcctcctcttctccaaggat
gaggacatctccttgactctcaacatgaatgaggaagaagtagaaaagcgctttgagggg
cgactcaccaagaacatgtcaggatccctctatgaaatggtcagtcgggtcatgaaagca
cttgtcaaccgtaaaatcacagtcccaggcaacttccaagggcactcaggggcccagtgt
attacctgctcctataaggccagctcaggactcctgtacccactggagcggggcttcatc
tacgtgcataagccccctgtgcacatccgctttgatgagatctcttttgtcaactttgcc
cgtggcaccacgaccactcgttccttcgactttgagattgagaccaagcaaggcactcag
tataccttcagcagcattgaaagggaggagtatggaaagcttttcgattttgtcaatgcg
aaaaagctcaacatcaagaacagaggactgaaagagggcattaacccaggctatgacgat
tatgctgactctgatgaagaccagcatgatgcctatttggagaggatgaaggaggagggc
aagatccgggaggagaatgccaatgacagcagcgacgactcaggagaagagactgatgag
tccttcaatcctggtgaagaagaagaagatgtggcagaggagtttgacagcaatgcctct
gccagctcctccagcaatgagggtgacagtgaccgtgaagagaagaaacgggaacagctc
aaaagggctaagatggccaaggatcgaaagagccgcaggaagtcttcagaggcaaagaag
ggtaaagatccaaacgccccaaagaggcctatgtctgcgtacatgctgtggcttaatgca
agccgcgagaagatcaagtcggatcatcctggcatcagtatcacagatctttccaagaag
gcaggggagatctggaagggaatgtccaaagagaagaaggaggagtgggaccgcaaggct
gaggatgctaggagggagtatgagaaagccatgaaagagtatgaaggaggaagaggggac
tcatctaaaagggacaagtctaagaagaaaaagaaagtaaaagcaaagatggaaaaaaag
tccactccttcccggggctcgtcatccaagtcttcatccaggcagttgagtgacagcttc
aagagcaaagagtttgtgtccagtgatgagagctcttcaggcgagaacaagagcaaaaag
aagaggaggcggagcgaggactctgaagaggagctagccagtacccctccaagctcagag
gactctgcctcgggatctgatgaataa
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