Mus musculus (house mouse): 208943
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Entry
208943 CDS
T01002
Symbol
Myo5c, 9130003O20Rik, C330029I24
Name
(RefSeq) myosin VC
KO
K10357
myosin V
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
208943 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
208943 (Myo5c)
04131 Membrane trafficking [BR:
mmu04131
]
208943 (Myo5c)
03029 Mitochondrial biogenesis [BR:
mmu03029
]
208943 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmu04812
]
208943 (Myo5c)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
208943 (Myo5c)
mRNA cycle factors
P-body specific factors
208943 (Myo5c)
Membrane trafficking [BR:
mmu04131
]
Others
Actin-binding proteins
Myosins
208943 (Myo5c)
Mitochondrial biogenesis [BR:
mmu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
208943 (Myo5c)
Cytoskeleton proteins [BR:
mmu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
208943 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
DUF6026
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
208943
NCBI-ProteinID:
NP_001074791
MGI:
2442485
Ensembl:
ENSMUSG00000033590
UniProt:
E9Q1F5
LinkDB
All DBs
Position
9:75139252..75212733
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAELYAQYNRVWIPDPEEVWKSAEIAKDYRAGDRVLRLLLEDGMELEYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGNTVIEGVNDR
ADMVETQKTFTLLGFKKDFQMDVFKILAAILHLGNVQVTTVGNERSSVSEDDSHLKVFCE
LLGLETSKVAQWLCNRKIVTSSETVVKPMTRPQAINARDALAKKIYAHLFDFIVEQINQA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNSSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEILRASKFHLCAAFFQESPVPSSPF
GAMITVKSAKQVIKPNTKHFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDEKMPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYGILMTQQELSLSDKKEVCKVV
LHRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQDCIMIQKHVRGWLQRRKFLRER
QAALTIQRYFRGQQTVRKAITATALKEAWAAIILQKYCRGYLVRNLYQLIRVATITIQAH
TRGFLARRRYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNRENHGLVEKLTSLAALRVGDLEKVQKLEAELEKAATHRHSYEEKGRRYRDTVEERLSK
LQKHNAELELQRERAEQMLQEKSEELKEKMDKLTRQLFDDVQKEEQQRLVLEKGFELKTQ
AYEKQIESLREEIKALKDERSQLHHQLEEGQVTSDRLKGEVARLSKQAKTISEFEKEIEL
LQAQKIDVEKHVQSQKREMRERMSEVTKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREETDINESIRHE
VTRLTSENMMIPDFKQQISELERQKQDLESRLKEQAEKIEGKLEEPFSHLNRIREEERMQ
GRAVEAQSEMHPEGKERLVGAIHEPHEAIKFPKKQPEAEEEVESILQQEASRLSLEKRDL
EEELDMKDRMIRRLQDQVKTLTKTTEKANHVHLPSGSREYLGMLEYKKEDEGKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSAINGIKHVVKEHFEDLEM
LSFWLSNTCHFLNCLKQYSGEEEFMKYNSPQQNKNCLNNFDLTEYRQILSDVAIRIYHQF
IIVMENNLQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYS
TMCQNGLDPEIVRQAVKQLFYLVGAVTLNSLLLRKDMCSCRKGMQIRCNISFLEEWLKDK
NVQSSLAKETLEPLSQAAWLLQVKKTTDSDAKEIAQCCTSLSAVQIIKILNSYTPIDDFE
KRVNPSFVRKVQALLNNRGDSAQLMLDTKYLFQVTFPFTASPHALEMTQIPSSFKLGFLR
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctctacgcgcagtacaacagggtttggatcccagatcctgaggaa
gtttggaagtcggctgaaatcgcaaaggactacagagcgggtgaccgagtcctcagactt
ctgctggaggatggcatggagctggaataccctgttgacccagggtcactgcctccgctt
cggaaccctgacatcctggtgggtgagaatgacctcacagccctcagctacctccatgag
cccgcagtgctgcataatctcagaatccgcttcgcagagtccaaactcatctacacctac
agtggaatcattttggtggccatgaatccttacaaacagctaccaatatacggggatgcc
atcatccacgcctacagcggacagaacatgggtgacatggacccacacatctttgcggtt
gcagaggaggcctacaagcagatggccaggaacaatagaaatcagtccataatcgtgagt
ggagaatcaggagccgggaagactgtctctgcacgctatgccatgaggtacttcgctacc
gtcagcaaatcgagcagcaatgcccatgtggaggacaaagtcttggcatccaatcccata
actgaggctgttggaaatgccaagaccacccgcaatgacaacagcagtcggtttgggaaa
tacacagagatcagctttgatgagagaaaccagatcattggcgccaatatgagaacttac
ctcctggagaagtccagagttgtctttcagtcagaaaatgaacggaattaccacatcttc
taccagctttgtgcatccgcacagcagtcagaatttaaacaccttaaactggggagtgcg
gaagagttcaactacacaagaatgggaggtaacactgtcattgaaggtgtcaatgacaga
gctgacatggtggagacccagaagaccttcacactactgggattcaagaaagattttcaa
atggatgtttttaagatcctagctgccatcctgcacctgggcaatgtgcaggtcaccacg
gtgggcaacgagaggtcttcagtcagtgaggatgacagtcacctgaaggtgttctgtgag
ctcttgggcctggagaccagcaaagtggctcagtggctgtgcaacagaaaaattgtgacc
tcctcggaaactgtggtaaagcccatgaccaggcctcaggccatcaacgccagggatgcg
ctggccaaaaagatctacgctcacctgttcgacttcattgtcgagcaaatcaaccaggcg
ttgcacttctcaggcaagcagcacacttttattggtgttttggacatttatggttttgag
acctttgatgtaaacagctttgaacagttctgcatcaattacgctaatgaaaaactacag
cagcagtttaacctgcacgtctttaaacttgagcaagaggaatacatgaaagaggacatc
ccctggactctgatagacttctatgacaaccagcctgttattgacctgatcgaggcaaaa
atgggcattttggagttgctggatgaagaatgcttgttgcctcatggcaccgatgaaaac
tggcttcaaaagctgtataacaattttgtcaacaagaactcgttattcgagaagcctaga
atgtcaaactcatccttcatcatccaacattttgctgacaaggtggagtaccaatgtgaa
gggttcctggagaagaacagagacactgtctatgacatgctggtggagatcctcagagca
agcaagtttcatctctgtgccgccttttttcaagaaagccctgttccgtcttctcccttt
ggggcgatgatcacagttaaatctgcaaagcaggtcatcaagccgaacaccaagcacttc
cggaccactgttgggaacaagttccgcagctctctgtacttgctcatggaaaccctcaat
gccaccacaccccactacgtccgttgcatcaagccaaatgatgagaaaatgccctttgag
tttgactccaagcggattgtccagcagctgcgagcctgtggcgttttagaaacgattcgc
atcagtgcccagagctacccttccaggtggacatacctcgagttctatagtcgctatggc
atcctcatgacccagcaggagctgtccctcagtgataagaaggaggtgtgcaaggtggtt
ctgcacaggctcatccaggattctaaccagtaccagtttggtagaaccaaaattttcttc
agagcaggacaagtggcttacttagagaaactccgcctggataaactgagacaggattgt
attatgatccagaaacacgtgcgaggctggctgcagaggaggaagttcctcagggagaga
caggctgccctgacaatccaacggtacttccggggtcagcagacagtgaggaaggccatc
actgccactgctttgaaggaggcctgggcggccatcatcctccagaagtattgccgaggc
tacctggtccgtaacctgtaccagctgatccgtgtggccaccatcaccatccaggcacac
accaggggcttcctagccaggaggcggtaccggaagttgttgcaggagcacaaggcagtg
atcctgcagaagtatgcgagggcctggctggcccggcgcagattccagaacatccgcagg
ttcgtgctcaacattcagctgacttacagggtccagcgcttgcagaagaagctggaggat
cagaacagagagaaccacgggctggtggagaagctgaccagcctggccgctctgcgggtt
ggcgatctggaaaaggttcagaagctggaagcagagctggaaaaggcagctacccaccgg
cacagctatgaagagaagggccgcagatacagggacacagtggaggagaggttgtcaaag
ctgcagaagcacaatgcagagctggagctgcagagagagcgagcagagcagatgctgcaa
gagaagtctgaggagctaaaagaaaaaatggacaagctcaccaggcagctgtttgatgat
gtgcagaaagaagaacagcaaagactagttcttgaaaaaggttttgagctgaaaacacaa
gcctatgagaaacagatagagtctctgagagaagagattaaagccctcaaggacgagagg
tcgcaactgcatcaccagctggaggagggacaggtcacctctgaccgcctgaagggggag
gtggcccgcctaagcaagcaggcaaagaccatctctgagtttgagaaggagatagagctg
ctgcaagcccagaagatagatgtggaaaagcacgtgcagtcacagaaacgggagatgaga
gaacggatgtcagaggtcaccaagcagcttttggagagctatgacatcgaagatgttaga
agcaggctctctgtggaagatctggaacatttaaatgaagatggagaactttggtttgcc
tacgaaggactaaagaaagcaactcgagttctggagagccatttccagtctcagaaggat
tgctatgaaaaagagattgaaggtctgaacttcaaagtcgtgcacctgagccaagagatc
aaccacctgcagaagctgttcagagaagagacagacatcaacgaaagtatccggcatgaa
gtcaccaggctgacatcagaaaacatgatgatcccagactttaagcagcagatttcagag
ctggagaggcagaagcaggatcttgaatcccgcctgaaggagcaggctgagaagatagaa
ggaaagctggaagagccgttcagccacctgaaccgaatccgagaagaggagagaatgcag
ggcagggccgtggaagcacagagtgagatgcatccagaagggaaggagaggctggtgggt
gcgatccacgaaccgcatgaagccatcaagttcccaaagaagcaaccagaagctgaggag
gaagtcgagagtattctccaacaagaagcgtcccggctctctttggaaaagagggatctc
gaggaagagttagacatgaaggacagaatgattagaaggctacaagatcaagtcaagact
ctgaccaagacgactgagaaagccaaccatgtgcacctgccctcgggatccagggagtac
ctggggatgctggaatacaagaaagaagatgaggggaagctcattcaaaacctcattctt
gacctgaagccccgaggtgtggtggtgaacatgatcccagggctgccagctcacatcctg
ttcatgtgcgtgcgatacgcggactccctaaacgacgccaacatgctcaaatccctcatg
aacagtgctattaacggcatcaagcatgtggttaaggaacattttgaagatttggagatg
ctgtccttctggctttccaacacttgccattttcttaactgcctgaagcagtacagcgga
gaagaggaattcatgaagtataacagcccacagcagaataagaactgcttgaacaatttt
gatcttacagaatacagacagattctcagtgatgtggccatacggatttatcatcagttc
atcattgtgatggaaaacaacctccagccgataatagtgccaggcatgctggagtatgag
agcctgcagggcatttccggcctgaagcccactggtttccggaagcgctcatccagcatc
gacgacacagatgcctacaccatgacgtccatcctgcagcagctgagctacttctacagc
accatgtgtcagaacggcctggaccccgagattgtgaggcaggcggtcaagcagttgttc
tacctggtcggggcggtgaccctcaacagcctcctcctgcgcaaggacatgtgctcctgc
aggaaaggcatgcagatcaggtgcaacatcagcttcttggaagaatggctaaaagataag
aatgtgcagagtagcttagccaaggagacactggagcccctctctcaggcagcctggttg
ctgcaggtgaagaagaccacagacagtgatgccaaggagatcgcccagtgttgcacttcc
ctgtctgctgtgcagatcataaagatccttaattcatacacacctatagacgacttcgag
aaaagagtcaatccatccttcgtccgcaaagtacaggctcttctgaataaccggggcgac
tcggcacagctgatgctggataccaaatatctttttcaagtcacatttcctttcaccgcc
tcaccacacgccctggagatgacccagatccccagcagcttcaagctcggctttctccgg
agactgtag
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integrated database retrieval system
