Mus musculus (house mouse): 209018
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Entry
209018 CDS
T01002
Symbol
Vps8, mKIAA0804
Name
(RefSeq) VPS8 CORVET complex subunit
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
209018 (Vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
209018 (Vps8)
Membrane trafficking [BR:
mmu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
209018 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_Vps41
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-RING_2
zf-C3H2C3
zf-RING_5
zf-C3HC4
EIF3I
WDR55
PHD
Motif
Other DBs
NCBI-GeneID:
209018
NCBI-ProteinID:
NP_001272822
MGI:
2146407
Ensembl:
ENSMUSG00000033653
UniProt:
Q0P5W1
LinkDB
All DBs
Position
16:21241859..21463431
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AA seq
1427 aa
AA seq
DB search
METEPDQEHLDQNPCARTVEEELSKSFNLEASLSKFSCLDLDKELEFRSDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNVDTIDSHSYDTSSVASSDSGDRANLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVN
NSVNPMLAFCRGDMVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDSVE
KLHVIDRQTQEELETMEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRSWRERMDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDVSKRK
AVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDTVPVIVDYCLLLQRKDLLFGQMY
DKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLLENVEALIVHMDIT
SLDIQQVVLMCWENRLYDAMVYVYNRGMNEFISPMEKLFKVIAPPLNAGKTLTDEQVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSVEASSEEEVYPYVRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK
AEFYQICEFMYEREHQYDKIIDCYLHDPLREEEVFNYIHNILSIPGHSAEEKQSVWQKAM
NHMEELVSLKPCKAAELVATHFSEQIEVVIGQLQNQLLLFKFLRSLLDPREGVHVNQELL
QIPPHITEQFIELLCQFSPDQVIQTLQVLECYRLEETIQITQKYQLHEVTAYLLEKKGDA
HGAFLLLLERLQSRLQEMTRQDENTKEDILLKGVEDTMVETIALCQRNSQNLNQQQREAL
WFPLLEAMMTPQKLSSSAAAPHPHCEALKSLTMQVLNSMAAFIALPSILQRILQDPIYGK
GKLGEIQGLILGMLDTFNYEQTLLETTASLLNQDLHWSLCNLRASVSRGLNPKQDYCSIC
LQQYKRRQEMADEIIVFSCGHLYHSFCLQSKECTLEVEGQTRWACHKCSSSNKAGKLSEN
PSENKKGRITSSQVKMSPSYHQSKGDPPARKANSEPVLDPQQMQAFDQLCRLYRGSSRLA
LLTELSQNRGGDSCRPFAGPQSGPAFNSVFQKENFQLQLAPPPVAED
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgaaccagaccaggagcatttggaccagaacccgtgcgccaggactgtggaa
gaagagttgagcaagtcttttaatttagaagcttccctttcaaaattctcttgcctagat
ctggataaggagctggagttcagaagtgacctgatcgatgacaaggagtttgatattcct
caggtggatacccctccaactctggaaagcattcttaatgagacggacgatgaagatgag
tctttcgttctggaggaccctaccttgttaaacgttgacaccatcgactctcactcttac
gatacctcatctgtggcgagctcagacagcggcgacagggccaacctaaagaggaagaag
aagttgccggactctttctcgctgcatgggtcggttatgcgacattcacttctaaagggg
atatctgcacagatcgtgtccgcagccgacaaagtagatgctggcttgcctacagcaatt
gccgtgtccagtctgatagcggtgggaacgtctcacggactggctttaatatttgatcag
aatcaagcactgcggctctgcctgggtagcaccagtgttggagggcagtatggagccatc
tctgccctcagcatcaacaatgactgctcaagacttctttgtggctttgctaaagggcag
atcaccatgtgggatttggccagtggaaaacttctcagatcaataacagatgctcatcct
ccagggaccgcaatcttgcacatcaagttcacagatgatccaactcttgcgatttgcaac
gacagtggaggctctgtttttgaactaacatttaagagagtgatgggcgtgcgaacgtgt
gagtctcggtgcctattcagcggctccaagggtgaggtctgctgcatcgagccgctgcac
tcaaagcccgagctgaaagaccatcccatcacgcagttctcactgctggccatggcgtcc
ttaacaaagatattggtcattgggttgaaaccatccctgaaagtgtggatgactttcccc
tatggacggatggatccttccagtgttccgctgctggcctggcacttcgtggcagtgaat
aactctgtgaatcccatgctcgccttctgcagaggcgacatggttcactttctcctggtt
aagagagatgagtcgggcgcaatacacgtcaccaagcaaaagcaccttcacctgtactat
gacctgatcaacttcacttggatcaactcgcgcacagtcgtgcttttagacagcgtggag
aagctgcacgtgattgatcggcagacgcaggaggaactggagacaatggagatctcggaa
gtccagctggtctacaacagcagccacttcaagtcattggccacgggaggaaatgttagc
caggccctggctttggttggagagaaggcttgctaccaatccatcagtagctatggagga
cagatcttctatctggggaccaagtctgtgtacgtgatgatgctgagaagctggagggag
aggatggaccatctcctgaaacaggattgccttacggaagccttggccctcgcgtggtct
tttcatgaaggaaaggcaaaagcagtagtggggctatcgggggatgtcagcaagaggaag
gctgttgttgctgatcggatggtagagatcctgttccattatgcagatcgggctctgaaa
aagtgcccggaccaggggaaaatccaagtgatggagcaacactttcaggatacggtgcca
gtcatagtggactactgccttctgctccagcgaaaggatcttctatttggtcaaatgtac
gacaaattaagtgaaaattccgtcgcaaaaggcgtgtttttggagtgccttgagccatat
atcttaagtgataaactggtggggattactccccaggtcatgaaggacttaattgttcat
ttccaagataaaaaactgctggagaatgtggaagccctcattgtccacatggacatcacc
agcctcgacattcagcaggtggtcctcatgtgttgggagaatcgtctgtatgacgccatg
gtctatgtctacaaccgaggcatgaatgagtttatcagtccgatggagaagcttttcaaa
gtcatcgccccacctctgaatgcagggaagactcttacagatgagcaagttgttatgggc
aacaagcttctggtgtacatcagctgttgcctggcaggtcgtgcctaccctctcggtgac
attcctgaagatcttgttcccttggttaaaaaccaggtttttgagtttctgattcgcctg
cattctgtagaagcatcctccgaggaagaagtctatccttatgttcggactttgctacat
tttgacacaagagaatttctgaatgtgctggcactgacctttgaagactttaaaaatgat
aagcaagctgtggaataccagcagcgcattgtggatattttattgaaggttatggtggag
aattcagattttaccccgtcacaagtggggtgtctctttacgttcctcgctcgtcagctc
gcaaagcctgacaataccttgtttgtgaacaggaccctctttgatcaagtcctcgagttc
ctctgtagccccgacgatgactcccgccactctgaaagacagcaggtccttttagaattg
ctgcaggccggaggcatagttcaatttgaagagagtcggctcatccgcatggcagaaaag
gcagaattctatcaaatctgtgaatttatgtatgagcgggaacaccagtatgacaagatc
attgactgctacctgcacgacccattgagagaggaagaagtcttcaattatatccacaac
atcttatctattcctggtcacagtgctgaggagaagcagtctgtgtggcagaaagcaatg
aatcatatggaggaacttgtgtccctgaagccctgcaaagccgcagagctggtggctact
cacttttctgagcagatcgaagtggtcattggacagcttcagaaccagcttttgcttttc
aaatttttgaggagtcttcttgatccaagggaaggtgttcatgtcaatcaggagttgctg
cagatcccgcctcacattacagagcagttcattgagctgctgtgccagttcagtcctgac
caagtcatacagacactgcaggtccttgagtgctaccgtctggaggaaacgattcagatt
acacaaaagtatcaactccatgaagtcactgcgtatctgctggagaagaaaggggatgca
cacggcgccttcctgctgctgctggagagactgcagagcaggctgcaagagatgacacgg
caggacgaaaataccaaggaggacatcctgctgaaaggtgttgaagataccatggtagag
acaattgctctttgccagagaaattcacagaatttgaatcagcagcaacgagaggctcta
tggtttccactgttggaggcaatgatgacaccacagaagctgtccagctcggctgctgct
cctcatccgcactgtgaagctctgaagtctttgaccatgcaagtcctaaacagcatggca
gcgttcatcgccctcccgtccatcctacagagaatcttgcaggacccaatttatggaaaa
ggaaagcttggagaaatccagggccttattctggggatgctggacaccttcaactatgag
caaaccttgctagaaacaacagccagcctcctgaaccaagatctccattggtcactgtgt
aacctgagagcatcagtatccagaggactcaatcccaagcaggattactgttctatatgt
ttacagcagtacaaaagacgccaagaaatggctgatgaaattattgtctttagctgtggc
catttgtatcattcattctgtctccaaagtaaggaatgcaccctagaggttgagggtcag
acgagatgggcgtgtcacaaatgcagctcaagtaataaagcgggcaaactcagtgaaaat
ccttctgaaaacaagaaaggacggataacctcgtctcaggtaaaaatgtcgccctcgtat
catcagtccaaaggggatcctcccgccaggaaggcaaactcagaacctgttctggaccca
cagcaaatgcaagcctttgatcagctctgccgtctctacagaggaagttctaggttggct
ctccttacggagctctcccagaaccgaggtggcgacagctgcaggccgtttgctggcccc
cagagtgggcctgctttcaacagcgtcttccagaaggagaacttccagctgcagctcgcg
cctccgcctgtggctgaagactga
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integrated database retrieval system
