Mus musculus (house mouse): 20971
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Entry
20971 CDS
T01002
Symbol
Sdc4, S4, Synd4, ryudocan, syndecan-4
Name
(RefSeq) syndecan 4
KO
K16338
syndecan 4
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04512
ECM-receptor interaction
mmu04514
Cell adhesion molecules
mmu04820
Cytoskeleton in muscle cells
mmu05205
Proteoglycans in cancer
mmu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
20971 (Sdc4)
04514 Cell adhesion molecules
20971 (Sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
20971 (Sdc4)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
20971 (Sdc4)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
20971 (Sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mmu00535
]
20971 (Sdc4)
Proteoglycans [BR:
mmu00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
20971 (Sdc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
20971
NCBI-ProteinID:
NP_035651
MGI:
1349164
Ensembl:
ENSMUSG00000017009
UniProt:
O35988
Q3U5S6
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All DBs
Position
2:complement(164266167..164285512)
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AA seq
198 aa
AA seq
DB search
MAPACLLAPLLLLLLGGFPLVPGESIRETEVIDPQDLLEGRYFSGALPDDEDAGGSDDFE
LSGSGDLDDTEEPRPFPEVIEPLVPLDNHIPENAQPGIRVPSEPKELEENEVIPKRAPSD
VGDDMSNKVSMSSTAQGSNIFERTEVLAALIVGGVVGILFAVFLILLLVYRMKKKDEGSY
DLGKKPIYKKAPTNEFYA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgcctgcctgcttgcgccgctgctgctgctgctcctcggaggcttccccttg
gtccccggagagtcgattcgagagacagaggtcatcgacccccaggacctcctggaaggc
agatacttctctggagccctccccgacgacgaagatgctggcggctcggatgactttgag
ctctcgggttctggagatctggatgacacggaggagcccaggcccttccctgaagtgatt
gagcccttggtgccactggataaccacatccctgagaatgcacagcctggcatccgtgtc
ccctcagagcccaaggaactggaagagaatgaggtcattcctaaaagggccccctccgac
gtgggggatgacatgtccaacaaagtatccatgtccagcactgcccagggcagcaacatc
tttgagagaactgaggtcttggcagctctgatcgtgggcggcgtggtaggcatcctcttt
gccgttttcctgatcctgctgctggtgtaccgcatgaagaagaaggacgaaggcagttac
gacttgggcaagaaacccatctacaaaaaagcccccaccaatgagttctacgcatga
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integrated database retrieval system