Mus musculus (house mouse): 21343
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Entry
21343 CDS
T01002
Symbol
Taf6, 80kDa, TAF(II)80, TAFII70, Taf2e, p80
Name
(RefSeq) TATA-box binding protein associated factor 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
21343 (Taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmu03021
]
21343 (Taf6)
03036 Chromosome and associated proteins [BR:
mmu03036
]
21343 (Taf6)
Transcription machinery [BR:
mmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
21343 (Taf6)
Coactivators
SAGA/TFTC/STAGA complex
21343 (Taf6)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
21343 (Taf6)
STAGA complex
21343 (Taf6)
TFTC complex
21343 (Taf6)
SAGA complex
21343 (Taf6)
SLIK complex
21343 (Taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Bromo_TP
TFIID-18kDa
Histone
Motif
Other DBs
NCBI-GeneID:
21343
NCBI-ProteinID:
NP_033341
MGI:
109129
Ensembl:
ENSMUSG00000036980
UniProt:
Q62311
LinkDB
All DBs
Position
5:complement(138176879..138185713)
Genome browser
AA seq
678 aa
AA seq
DB search
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG
KGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLRPPPDNQDAYRGEFGSLGPLLCSHVVKARAQAALQAQQVNRT
TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV
MSSSSSASSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPAGS
GSVQKYIVVSLPPTGEGKGGPPSHPSPVPPSSSSPSPLGGSTLCGGKQEAGDSPPPAPGT
PKANGSQPTGPGSPQPAL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagaagaaactgaaactcagcaatactgtgttgccctctgagtccatgaag
gtggtggcagaatctatgggcattgctcagattcaggaggagacttgccagctactgaca
gatgaggtcagctaccgcatcaaggagattgcccaggatgccctgaagttcatgcacatg
gggaaacgacagaagctcactaccagtgacattgactatgcattgaagttaaagaatgtg
gagccactgtatggcttccatgctcaggagttcatccctttccggtttgcctctggcggg
ggccgggagctgtacttctatgaagagaaggaagtggacctgagtgacatcatcaacacc
cctctgcctcgggtgcctctggatgtctgcctcaaagctcattggctaagcatcgaaggc
tgccagccagctataccagagaatccacccccagctcccaaagagcagcagaaggctgag
gccacagaacccctgaaatcagcaaagccaggccaagaagaagatggacccctgaaaggc
aaaggtcaaggggcagctgcagctgatggcaaaggaaaagagaagaaggcacctcccttg
ctggagggggcccctttccgcctgaagccccgcagcatccatgagctgtctgtggagcag
cagctgtattacaaggagatcacggaagcctgtgtgggatcctgtgaggccaagagagcg
gaagctctgcagagcattgccacggacccagggctctatcagatgctaccacggttcagt
accttcatctcagagggggtccgtgtgaatgtagttcagaataacctggccttgcttatc
tacctgatgcgtatggtgaaggccctgatggacaaccccacactgtatctagagaaatat
gtgcatgagctcattccagcagtaatgacctgcattgtgagtagacagctgtgcttgcgg
ccagatgtggacaatcactgggcactccgggattttgctgcccgtctagtggcccaaatc
tgtaagcatttcagcacaaccaccaacaacatccaatcccgaatcactaagacctttacc
aagagctgggtcgacgagaagactccatggacaactcgatatggctccattgcaggccta
gcagagctgggacatgatgtgattaagacgctaattctgccaaggctgcagcaggaaggg
gaacggatccgcagtgtcttggatgggcctgtgctgagcaacatcgaccgtattggagca
gaccatgtgcagagccttctcctgaaacactgtgccccagtactggccaagctgcgccct
ccacctgacaatcaggatgcctaccggggagaatttgggtcccttgggccccttctctgt
tcccatgtggtgaaggccagggcccaggctgctctacaagctcagcaggtcaacaggacc
acactcaccatcacacagcctcggcccacactgaccctttcacaggcccctcagccaggc
cctcgcacgcctggcttattgaaggtccctggctccattgccttgcctgttcagacactg
gtgtctgcgagagctgctgctcctcctcagccttctcctcctccaaccaagtttattgta
atgtcctcatcttccagtgcctcatcaacccagcaggttctgtccctcagcacctcagct
cctggctcaggctctactactacctctcctgtcaccaccacggttcccagcgtgcagccc
atcgtcaagctggtctccactgctaccactgcacccccaagcacagcccctgctggttct
ggcagtgttcagaaatacattgtggtctctcttcccccaacaggggaaggcaaaggaggc
cctccttctcatccttctccagtccccccttcatcttcttcaccatccccacttggggga
agtaccctctgtggggggaagcaggaagctggggacagcccccctccagctccagggact
ccaaaggctaatggctcgcagcctactggacctggctctccccagcctgctctgtga
DBGET
integrated database retrieval system
