Mus musculus (house mouse): 214105
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Entry
214105 CDS
T01002
Symbol
Sox30
Name
(RefSeq) SRY (sex determining region Y)-box 30
KO
K09271
transcription factor SOX15/30
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
214105 (Sox30)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
214105 (Sox30)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
214105
NCBI-ProteinID:
NP_775560
MGI:
1341157
Ensembl:
ENSMUSG00000040489
UniProt:
Q8CGW4
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Position
11:45869873..45908824
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AA seq
782 aa
AA seq
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MERARPEPPPPPPPPPRQPPRPTPPRPLRPAPPAQPVEAATFRAAAAERSQSPSAQATAA
MAAVASSCGEAAAAGAQAAGTRRLLQVKPEQVLLLPPGGPGVPPAPDEGAAAAAAAAAAA
ASSAQARLLQLRPELLLLPPQSAADGGPCRPELHPMQPRTLLVKAEKQELGAGLDLSVGS
RRTTEAGPRASRAAKLDGTGKALDGRRSDEKKAKLEAEEAPRDALKGGEGKSLLAIGEGV
IKTEEPDRPRDDCRLGTEATSNGLVHSSKEAILAQPPSAFGPHQQDLRFPLTLHTVPPGA
RIQFQGPPPSELIRLSKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSK
DRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQ
KIKEKHREEFPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVI
PGLQNTITHPVGEAPPAIQLPTPAVQRPSPITLFQPSVSSTGPVAVPPPSLTPRPSLPPQ
RFSGPSQTDIHRLPSGSSRSVKRSTPGSLESTTRIPAGASTAHARFATSPIQPPKEYASV
STCPRSTPIPPATPIPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPY
SRPPFGYGNFPSSMPECLGYYEDRYQKHEAIFSALNRDYPFRDYPDEHTHSEDSRSCESM
DGPPYYSSHGHGGEEYLNAMPTLDIGALENVFTAPASAPSGVQQVNVTDSDEEEEEKVLR
NL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccaccgccgccaccgccgccgccgccgcgccaaccgccg
cggcccacccctccgcgcccgttgcgccccgctccgcccgcgcagcccgtcgaggccgcc
accttccgggccgcggccgcagagcgctcccagtcgccgtcggctcaggccacggccgcc
atggccgcggtggcctcgtcgtgcggggaggccgcggcggcgggtgcgcaggcggcaggg
acgcgacgcctgctgcaagtgaagccggaacaggtgctgctgctgcctcccggaggaccg
ggggtgcctccggctcccgacgagggcgcagccgccgccgccgctgccgctgccgccgcc
gcctcgtccgcgcaggcgcgcctgctgcagctgaggccggagctgctgctgttgcctccg
cagtccgcggccgacggaggcccctgcaggccggagctgcaccccatgcagccccggacg
ctgctcgtcaaggccgagaagcaagagctgggggcgggcttggacctgtcggtgggatct
cggaggaccaccgaggccggcccgagagcctcgagggccgccaagttggatggcaccggg
aaggccctcgacggccgccgaagcgatgagaagaaagccaagctggaggcagaggaggct
ccgagggatgcgctgaaaggcggggaaggcaagagcctgctggccatcggagaaggagtc
atcaagacggaggagccagacagacccagggacgattgtaggctgggcacggaggccacg
tccaatggcctggtccacagcagcaaggaggccatcctggcccagccgcctagtgctttt
gggccacaccagcaagacctaaggttccctttgacactccacaccgtcccacctggagcc
cgtatccagtttcaggggcctccgccttctgagttgatacggttgtccaaagtccccctg
acaccagtgcctattaaaatgcagtccttgctggagccttctgtaaaaattgaaaccaaa
gatgtccccctcaccgtgctgccctcagatgcaggaatacctgatactcccttcagtaag
gacagaaatggtcatgtgaagcgacccatgaatgcatttatggtttgggcaagaatccac
cggccagcactagccaaagctaacccagccgccaacaatgcagaaatcagtgtccagctc
gggttagagtggaacaaacttagtgaagaacaaaagaaaccttattatgatgaagcacaa
aagattaaagagaagcacagagaggagtttcctggttgggtttatcagcctcgtccaggg
aagcgaaaacgcttccctctaagtgtttccaatgtattttctggtaccacacagaatatt
atctctacaaatcctacaacaatttatccttatcgctcacctacctactctgtggtaatt
cccggccttcagaacaccatcactcatccagttggtgaagcccctcctgccatccagctg
cccacacctgcagtccagcgcccaagtcccatcacacttttccagcccagcgtctccagc
actggcccagtggccgtcccgcctccaagcctgacgccccgcccatcactcccacctcag
cgcttttctgggccttcccaaactgacattcataggctcccttcgggaagcagtcgctct
gtgaagagatccactccaggctctctggagagcaccaccaggattccagctggtgcaagt
actgcccatgccagatttgcaacctcgcctatccagcctcctaaggagtatgccagcgtt
tccacttgtccccgaagcactccgatacccccggcgactcccattccacactcacacgtc
tatcagcccccaccccttggccatccagccacactgtttgggacaccacctcggttctcc
tttcatcacccttacttcctacctggacctcattacttcccgtcaagcacgtgcccttat
agtcggcctccctttggctatggaaattttccaagttcaatgccagaatgtcttggttac
tatgaagacagataccaaaaacatgaggctatcttttcagctttaaatagagactatcct
ttcagagactatccagatgagcacacacacagtgaagactctcggagctgtgagagcatg
gacgggcccccttactacagcagccatggccacggtggggaagagtacttgaatgccatg
cccactctggacattggagccttggagaatgtcttcacagccccagcctcagccccctct
ggtgtccagcaagtcaatgtcactgacagcgacgaggaggaagaagaaaaagtgctcagg
aatttatag
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