KEGG   Mus musculus (house mouse): 214899
Entry
214899            CDS       T01002                                 
Symbol
Kdm5a, Jarid1a, RBP2, Rbbp2
Name
(RefSeq) lysine demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mmu01009]
    214899 (Kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    214899 (Kdm5a)
Enzymes [BR:mmu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     214899 (Kdm5a)
Protein phosphatases and associated proteins [BR:mmu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     214899 (Kdm5a)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    214899 (Kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 PHD_4 FRG1 ASH2L-like_WH
Other DBs
NCBI-GeneID: 214899
NCBI-ProteinID: NP_666109
MGI: 2136980
Ensembl: ENSMUSG00000030180
UniProt: Q3UXZ9
LinkDB
Position
6:120341060..120421535
AA seq 1690 aa
MASVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPFAEKTGICKIRPPKDWQPP
FACEVKTFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYAL
SKIVASKGGFEIVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPDLDLKEKVEAEVLSTDIQPSPERGTRMNIPPKRTRRVKSQSDSGEVNRNTELKKLQ
IFGAGPKVVGLAVGAKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCG
RGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVRE
YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS
GFPKKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM
NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVN
HYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVVM
SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCSCPMQNKCLRYRY
PLEDLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDRKYPENDL
FRKLRDAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVI
SQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQ
ARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQSGNNYAYL
EQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI
GVYGSGKNRRKKVKEIIEKEKEKDLDLEPLSDLEEGLEESRDTAMVVAVFKEREQKEIEA
MHSLRAANLAKMTIVERIEEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKG
SSWQAKDVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDKA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLPSFQQSA
FNRVVSSVSSSPHQTMDYDDEETDSDEDIRETYGYDMKDTASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSIEEKPLKMKGKD
SSEKKRKRKLEKVEQLFGEGKQKTKELKKIDKPKKKKLKLNVDKSKELNKLAKKLAKEEE
RKKKKEKAAAAKVELVKESTEKKRERKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK
DKVDWVQCDGGCDEWFHQVCVGVSAEMAENEDYICINCAKKQGPDSPGQAPPPPFLMSYK
LPMEDLKETS
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggcgtccgtgggcccggggggctacgcggcggagttcgtgccaccgcccgagtgcccg
gtctttgagcccagttgggaggagttcacagacccgctgagttttatcgggcgcatccgg
ccctttgcggagaaaacgggcatctgcaaaatccggccacccaaggattggcaacctcca
tttgcctgtgaagtaaaaaccttccgtttcactcctagagtccagcgcctgaatgaactt
gaggcaatgactagagtaagattggacttcttggatcaactggcaaaattttgggaactt
caaggatctacattgaagatccctgtggtggagagaaaaatcctggatttgtatgcttta
agcaagattgttgccagcaaaggaggttttgaaatagtcaccaaagagaagaaatggtct
aaagtgggtagccgcttgggatatctgccaggaaaaggaactgggtctcttttgaagtca
cactatgaaagaattctctacccatatgaacttttccaatctggtgtcagccttatgggt
gtacaaatgcctgatttagatcttaaagaaaaagttgaggctgaggttctcagcactgac
atccagccttccccagagcggggaacaagaatgaatattccaccaaagagaacaagacga
gttaagtctcagtcagactctggagaagtaaatagaaacacagaactgaagaaacttcag
atttttggggctggacccaaagttgtgggcctggcagtaggagcaaaagataaagaagat
gaagtcacccgaagaagaaaagttaccaacaggtcagatgcatttaacatgcaaatgaga
caacggaaaggaactctctctgttaactttgttgatctctatgtttgcatgttttgtggt
cgaggaaataatgaggataaactgcttttgtgtgatgggtgcgatgacagctatcataca
ttttgtctacttccaccactacctgatgtccccaaaggagactggaggtgtcctaaatgt
gttgctgaggaatgtaacaaacctcgagaagcctttggatttgagcaagctgtaagagaa
tatacacttcaaagctttggagagatggcagataattttaaatctgattatttcaatatg
ccagtccatatggttcctacagagctagtagaaaaagaattctggcggctagtaagtagc
attgaagaagatgttattgtagagtatggagctgatatctcttcaaaagattttggaagt
ggatttcctaaaaaggatggtcaaagaaagatgttgccagaagaagaggaatatgcactt
tctggttggaatttgaataacatgcctgttctggagcagtccgttcttgcacatattaat
gtggacatttctggtatgaaggtgccatggctctatgtgggaatgtgcttttcttctttt
tgctggcatattgaagatcactggagttattccattaactacttgcattggggcgagcca
aagacatggtatggtgtaccatctcatgctgcagaacaactggaggaggtgatgagggag
ctggcccctgagttatttgaatcccagcctgatctcctacatcagttagtaaccatcatg
aacccaaatgtgctcatggagcatggtgtgcctgtgtacaggactaatcagtgtgctgga
gagtttgtggtgacgtttcctcgtgcctatcactctggatttaaccagggatacaacttt
gccgaagcggtgaacttctgtactgctgactggttgcccattggacgtcagtgtgtaaat
cactatcgacggctcaggcgccattgtgtcttttcacatgaggaactcattttcaagatg
gcagcagatccagaatgcttagatgtggggctggctgccatggtatgcaaagagttgact
ctcatgactgaagaagaaacacgattgagagaatcagttgttcaaatgggtgtcgtgatg
tcagaagaagaagtctttgaacttgttcctgatgatgagcggcagtgttcagcatgcaga
actacatgttttctctcagctctcacatgctcctgtaatccggagcgacttgtatgtctg
tatcatccaactgatttgtgctcttgccccatgcagaacaaatgtcttaggtaccgctat
ccactagaagaccttccatctctgctttatggtgtcaaagtgagagcacaatcctatgac
acttgggtcaatcgtgttacagaagcattgtcagctagcttcaaccataagaaagatttg
attgaattgagagtaatgctggaagatgctgaggataggaaatacccagagaatgatctc
tttcgaaagctcagggacgcggtgaaagaagctgagacctgtggttctgtggctcagctg
cttctgagcaaaaagcaaaaacacaggcagagctcagatagtgggaagactcggaccaaa
ctgacagtagaagaattgaaggcctttgtccaacaacttgttagtcttccgtgtgtcatc
agccaaactcgacaagtaaagaatctgctggatgatgtagaagaatttcatgaacgtgcc
caggaggccatgatggatgaaaccccagattcttccaaactccaaatgttaatagacatg
ggctctagtctctatgtggagctacctgaattgccccgactaaagcaagagctccagcag
gctcgatggctggatgaagtaaggctaactctatcagatccacaacaagtcactttggat
gtcatgaagaaattgattgactctggcgtaggcttggcacctcaccatgctgtagaaaaa
gcaatggccgaactacaggaactccttacagtctctgaacgatgggaagagaaggctaag
gtctgcctgcaagcaagacctcggcacagtatggcaaatttagaaaatattgtgaatgaa
gccaagaacattccagcctttctacccaatgtgttgtccttaaaagaagccttacaaaag
gctcgtgaatggacagctaaagtggaagctattcagagtggcaacaactatgcttacttg
gaacagcttgagagcctatctgctaaaggacgccctatccctgtgcgtcttgatgccttg
cctcaagtggagtcacaggtagcagcagcacgggcctggagagaacgtactgggcggacc
ttccttaaaaagaattccagccatacattgttacaggtgctaagtccacgaactgacatt
ggtgtatatgggagtggtaaaaacaggaggaaaaaggtaaaagaaataatagaaaaagaa
aaggagaaggacctcgaccttgagcctttgagtgacttagaggaaggactggaggagtca
agagatacagccatggtggtggcagttttcaaagaacgagagcaaaaggagattgaagcc
atgcattccctcagagcagccaacctagccaagatgacaattgtggagcgcatagaagaa
gtgaaattttgtatttgccgcaagacagccagtgggtttatgctacagtgtgagctctgc
aaagactggttccataacagctgtgttccccttcctaaatcaagttcccagaaaaaggga
tccagctggcaggctaaagatgtaaaattcctttgccctctttgcatgagatctcggagg
ccaaggctagagactattctgtcactcctggtatcccttcagaagttgcctgtacggttg
ccggaaggagaagcactgcagtgtttgacagaacgtgccatgagttggcaagataaagca
cgccaagctttagccacagatgaactgtcctctgccctggccaagctctctgtgctaagc
cagcgtatggtggaacaagcagctagagaaaaaactgaaaagattatcagtgcagaactc
caaaaagcagctgccaatccagatttacagggacacttacctagtttccagcagtctgct
tttaaccgggtggtgagcagtgtatcatcttccccccaccaaacaatggactatgatgat
gaagaaacagattctgatgaagatattcgggagacatacggctatgacatgaaggataca
gccagcgtgaagtcctctagtagtctggaacccaatctcttttgtgatgaagagattccc
atcaagtctgaggaagtggtgactcacatgtggacggcaccgtcattctgtgcagagcat
gcatattcttctgcttcaaagagttgttctcaaggttctagcactccaagaaagcagcct
cggaagagccctttggttcccagaagtttggagcctccagtattggaattgtctcctgga
gcaaaagcccagttggaagaactcatgatggttggagacctcctagaagtgtctctggat
gagacacaacacatttggcggattttgcaggccacacatccaccctcagaggacagattc
ttacatatcatggaggatgatagcatagaagagaaaccattaaaaatgaaaggaaaggac
tcttcagagaagaaacggaaacggaagctagaaaaggtagaacagctttttggagaagga
aaacagaagaccaaggagctaaagaaaatagataaacctaaaaagaagaaattaaaatta
aatgtggacaaatcaaaagagctgaataaattggccaagaagttagctaaagaagaagag
cgaaagaaaaagaaagaaaaggctgctgccgccaaagtggagcttgtgaaagagagcacg
gagaagaaacgggagaggaaggtgttggatatcccctcaaagtatgactggtcgggggca
gaggagtctgatgatgagaatgctgtgtgtgcagcccaaaactgccaaaggccgtgtaag
gacaaggtagactgggtacagtgtgatggtggctgtgatgagtggtttcatcaagtttgt
gttggtgtatccgcagaaatggctgaaaatgaagattacatctgtataaactgtgcaaag
aagcaggggccagatagcccaggccaagcaccacctcctcccttcctaatgagctacaaa
ctaccaatggaggatcttaaagagaccagttag

DBGET integrated database retrieval system