Mus musculus (house mouse): 217109
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Entry
217109 CDS
T01002
Symbol
Utp18, 6230425C22Rik, 6430513M13, Wdr50
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
217109 (Utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmu03009
]
217109 (Utp18)
Ribosome biogenesis [BR:
mmu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
217109 (Utp18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_1st
Beta-prop_ACSF4
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_RIG_2nd
CFAP43_N
EIF3I
Beta-prop_WDR35_TULP_N
CFAP251_N
Beta-prop_TEP1_2nd
NBCH_WD40
ASA1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Cytochrom_D1
Beta-prop_Vps41
Hira
KNTC1_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
217109
NCBI-ProteinID:
NP_001013393
MGI:
1923402
Ensembl:
ENSMUSG00000054079
UniProt:
Q5SSI6
Q3U3Q3
Q8BHW1
LinkDB
All DBs
Position
11:complement(93750069..93776592)
Genome browser
AA seq
552 aa
AA seq
DB search
MPPERKSRTRRDRRAGATPGRKARPGSGSTPAKAARSSQRTQPAEPRAAPSAGSAAAAAE
EEESRLRQRNRLTLEDDKPAAERCLEQLVFGDVEDDEDALLQRLRSSRGQLHGSSDESEV
ENEAKDIFSQKKKQPVWVDEDDEDEEIVDMSNNRFRKDIMKNASESKLSKDKLQKRLKEE
FQHAMGGVPDWAEAGSKRRTSSDDESEEDEDDLLQRTGNFISTSTSLPRGILKMKNCRPA
NAERPTTARISSVQFHPGAQVVMVSGVDNAISLFQVDGKTNPKIQSIYLEKFPIFKACFS
ANGEEVLATSMHSKVLYVYDMLAGKLIPVHQVRGLKEKTVKQFEVSPDGSFLLISGIAGF
SHLLSMKTKELIGSMKINGRIAASTFSSDSKRIYTYSENGEVYVWDVNSRKCMNRFLDEG
SLCGLSIAASKNGQYVACGSKSGVVNIYNQDSCLQQTNPKPIKAIMNLVTGVTSLAFNPT
TEILAVASRKMKEAVRLVHLPSCTVFSNFPVFKKSTLSRVQTMDFSPRGGYFALGNEKGR
ALMYRLHHYSDF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgaacgcaagagccggacgagacgagaccggagagccggcgcaacgccgggg
aggaaagccagacccgggagcggcagcacgcccgcaaaggccgcccgttcatcccaacgg
acacagccggccgagccgagggcggcccctagcgcgggatccgcggcggcggcggcagag
gaggaggagagccggctccggcagcggaaccgcctgacgctagaggacgataagccggcc
gccgagcgttgcctggagcagctcgtcttcggcgatgtcgaggacgacgaggacgcgctg
ctgcagcggctgcggagctcgcggggtcagctacatggaagctcagatgaatcggaagtg
gaaaatgaagcaaaagacattttttctcagaagaagaagcagccagtttgggtggatgaa
gatgatgaagatgaggaaatagttgacatgtcgaacaatcggtttcggaaagatataatg
aaaaatgccagtgaaagtaaactttcaaaagataaacttcaaaagagacttaaagaagaa
ttccagcatgccatgggaggagtacctgattgggcagaagctgggagcaagcggaggaca
tcttcagatgatgaaagtgaagaggatgaagatgatttgttgcaaaggactgggaatttc
atctccacatccacgtctcttccaagaggaatcttgaagatgaagaactgccggcctgcc
aatgctgaacggccaaccactgctcggatctcgtcagtgcagttccatcctggtgcacag
gtggtgatggtctctggggtagataatgctatctccctctttcaggttgatggcaaaaca
aaccctaaaatccagagcatctatttggagaagtttccaatctttaaggcttgtttcagt
gctaatggagaagaggttttagccacaagtatgcacagcaaggttctttatgtctatgat
atgctagctgggaagttaattcctgtacatcaagtgagaggtttgaaagagaaaacagtg
aagcagtttgaagtctccccagatggatccttcttgctcataagcggcattgcagggttt
tctcacttgctatcgatgaagacaaaagaactcataggtagcatgaagattaatggacga
attgcggcatccacattctcttcagatagtaagaggatatatacctattctgagaatgga
gaagtttatgtgtgggatgtgaattcaaggaagtgcatgaacagatttcttgatgaaggc
agtttatgtggattgagcattgctgcatcaaagaatggacagtatgtggcttgtggttct
aagagtggagtggtaaacatatacaatcaagattcctgcctccagcaaacaaacccaaag
ccaataaaagcaataatgaatctggttactggtgttacttccttggcctttaatcctacc
acagaaatcttggcagtggcttcaagaaaaatgaaagaagctgtcagattggttcatctt
ccttcctgtacagtattttctaactttccagtttttaaaaagagtactctttctcgtgtt
caaaccatggatttttctcccagaggtggatactttgccttagggaatgaaaagggcagg
gccctgatgtataggttgcatcattactcagacttctga
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