Mus musculus (house mouse): 217351
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Entry
217351 CDS
T01002
Symbol
Tnrc6c, 9930033H14Rik, mKIAA1582
Name
(RefSeq) trinucleotide repeat containing 6C
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
217351 (Tnrc6c)
03036 Chromosome and associated proteins [BR:
mmu03036
]
217351 (Tnrc6c)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
217351 (Tnrc6c)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
217351 (Tnrc6c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
RRM_1
UBA
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
217351
NCBI-ProteinID:
NP_932139
MGI:
2443265
Ensembl:
ENSMUSG00000025571
UniProt:
Q3UHC0
B1ATC3
LinkDB
All DBs
Position
11:117544529..117654265
Genome browser
AA seq
1900 aa
AA seq
DB search
MEEKKKKKQEDKKKKEGAQKKAADQKTKVPELTKTCSSQPQPAGTSPSTSTSTISSGSNG
KRASACGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGGLTSLNSAQAAGPAGASP
PPLPGAGAQQHPSKLQQDLGHSGLVDHYENSHWGQHPSYRSEANCSWDKVIIDRTEPEVW
PSIPVTETESASECPTDTDSASNCGSENSSMATGSAQSSFPSHLKKTNGSHGTNGALVQS
PSNQSALGAGGTNGNGGVARVWGVATSSSSGLAHCSVGGGDGKMDNMIGDGRSQNCWGAS
NSNAGINLNLNPNANPAAWPVLGHEGTVATGNPSSICSPVSAIGQNMGSQNGNPVGALGA
WGNLLPQESAEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGM
AVGMGAIIPPHLQGLPGANGSSVSQGSGSGGEGMGSSVWGLSPGNPATGSTNCGFSQGNG
DTVNSALSAKQNGSSSAVQKEGNGGNAWDSGPPAGPGILAWGRGSGTNGIGNIHSGAWGH
PSRSSSNGVNGEWGKPPNQHSSSDISGKGSTGWDSASAASQTPALQPGSEHMNSWAKATS
SGTTASEGSSDGSGNHNEGSTGREGTGEGRRRDKGVLDQGHIQLPRNDLDPRVLSNSGWG
QTPVKQNTAWEFEESPRSERKNDNGTEAWGSIATQPSNSGGKTDGSIMNSTNTSSVSGWV
SSPPAAVPANTSWGDSNNKAPSGPGVWGDSISSTAVNNAAATKSGHAWSGTVNQEDKSPT
WGEPQKPKSQNWGDGQRANPAWSTGAGDWADSSSVLGHLGDGKKNGSGWDADGNRSGSGW
NDATRCGTSGWGSGTNAKVNPGTNWGESLKPGPQQNWAHKPQDNNVSNWGGAASVKQTGT
GWIGGPLPVKQKDSSEATGWEEPSPPSIRRKMEIDDGTSAWGDPSTYNNKTVNMWDRNNP
VIQSSTTAPATPTTPTSSSTTHRAETPPSHQAGTQLNRSPLLGPVSSGWGEMPSVHSKAE
NSWGEPSSPCTLVDNGTAAWGKPPSSGSGWDHPAEPVVPFGRASAPAAAPALCKPASKSM
QEGWGSGADEMNLGTSQWEDEDGDMWNNAASQESSSSCSSWGNTSKKGLQKGMKTPGKQD
EAWIMSRLIKQLTDMGFPREPAEEALKSNSMNLDQAMSALLEKKVDMDKRGLGMTDYNGM
VTKPLGCRPPISKESSMDRPTFLDKLTLSFSNQDGGLVEEPTTSPFLPSPSLKLPLSNSA
LPSQALGGVASGLGMQNLNSSRQIPSGNLGVFGNSGAAQARTMQQPPVQPLNSSQPSLRA
QVPQFLSPQVQAQLLQFAAKNIGLSPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQM
LQAQRNVSGPMRQQEQQVARTITNLQQQIQQHQRQLAQALLVKQPPPPPPPPHLSLHPSA
GKSGMESFPPPPQAPGLPDLQTKEQQSSPNTFAPYPLAGLNPNMNVNSIDMSSGLSVKDP
SQSQSRLPQWTHPNSMGNLSSAASPLDQNPSKHGAIPGGLSIGPPGKSSIDDSYGRYDLI
QNSESPASPPVAVPHSWSRAKSDSDKISNGSSISWPPEFHPGVPWKGLQNIDPENDPDVT
PGSVPTGPTINTTIQDVNRYLLKSGGKLSDIKSTWSSGPASHTQASLSHELWKVPRNTTA
PTRPPPGLANPKPSSTWGTSPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGSTL
RTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVN
RFLAQGQALPPTSSWQSSSGGSQPRLGTSGSTHGLVRSDTAHWNTPCLSGKGSSELLWGG
VPQYSSSLWGPPSAEDARVIGSPTPLNTLLPGDLLSGESI
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagacaagaaaaagaaggaaggtgctcagaaa
aaggctgctgatcaaaaaaccaaagtgccagaacttactaagacctgttcaagccagccc
caacctgccggtaccagtcccagtacttccaccagcactatttctagcggcagcaatggc
aaacgtgcatctgcctgtggccagcagccagctgcatcccgttacctgcctcgggaggtg
cctccacgctttcgccagcaagaacagaagcagctgttaaagagaggccagccattgccc
acagggggtctgaccagtttgaactcagcacaggctgctggacctgcaggggccagccct
cctcccctccctggagctggggcacagcaacatcccagcaagctccaacaagatcttggt
cacagtggattggtagatcattatgaaaattcccactggggacagcatccctcttacaga
agtgaagccaactgcagctgggataaagtgataatagacaggactgagccggaggtgtgg
ccgtccatcccagtaactgagacggaatctgcctcagaatgtcctaccgacactgactct
gcctccaactgtggctcagagaacagtagcatggctacagggagtgcccagagcagcttc
ccgagccacctgaagaagacaaacggcagtcatggcaccaatggcgcactcgtccaaagc
ccttctaaccagagtgcccttggggcaggaggaaccaatgggaacgggggcgtggccaga
gtgtggggtgtagccacaagctccagctctggcctggctcactgctctgttggtggtgga
gatgggaaaatggacaacatgatcggagatgggagaagtcagaattgttggggtgcttct
aactccaatgcgggcattaatctcaaccttaatccaaatgccaacccagctgcctggcct
gtactcgggcatgaaggaactgtggcaacaggcaacccttccagtatttgcagtccagtc
agtgccataggtcagaatatgggcagccagaatgggaacccagtgggcgccctaggtgcc
tggggaaacttgctgccccaagagagcgcagaaccacagacatccacttctcagaatgtg
tctttcagcgtacaacctcagaaccttaacactgatggaccaaataacactaaccccatg
aactcttcaccaaaccctatcaatgcaatgcagacaaacggactgccaaactggggcatg
gctgttggtatgggggccatcatcccaccccacctgcaaggccttcctggtgctaacgga
tcatcagtctctcaaggcagtgggagtggtggggaaggaatgggcagttctgtgtgggga
ctgtcccctggtaaccctgccacaggaagtaccaattgtgggttcagtcaagggaatgga
gacactgtgaactcagcattaagtgctaagcagaacggatccagcagtgctgtgcagaag
gaagggaatggagggaacgcctgggactcagggcctcctgcagggcctggcatccttgcc
tggggaaggggcagtggcaccaatggcattggtaatatccattcaggagcttggggccat
cccagccgaagttcttctaatggtgtgaatggggagtgggggaagcccccaaaccagcat
tccagtagtgacatcagtgggaaaggatcaacagggtgggacagtgccagtgctgccagc
cagacccctgccctgcagcctggcagtgaacacatgaactcgtgggccaaagccacatct
tctggaactacagcaagtgaaggaagcagtgatgggtccggcaatcacaatgaaggaagc
actgggagggaagggacaggagagggccggaggcgagacaaaggggttctagaccaaggg
cacatccagttgccaaggaatgaccttgacccaagagttctgtctaacagtggttgggga
cagactcccgtaaagcaaaacactgcctgggaatttgaagagtcccctaggtctgaaagg
aaaaatgacaatgggacagaggcctggggtagtatagctactcagccttcaaactcaggg
gggaagactgatgggtccatcatgaacagtacaaatacctcttcagtatcggggtgggtc
agctcaccacctgccgccgtgccagcaaacacaagctggggagacagcaacaacaaagcg
ccaagtggcccaggagtttggggggactcaataagctctactgctgttaacaatgctgct
gccaccaagagtggccatgcttggagtgggactgtaaaccaagaggacaaatcacccacc
tggggtgagcctcagaagcccaaatcccaaaactggggagatggacaaagagcaaaccca
gcctggagcacaggggcaggagactgggcagattcatcatctgtccttggacatctaggg
gatggaaagaaaaatggatctggatgggatgctgatggtaataggtcagggtctggttgg
aatgatgccacgagatgtgggaccagtggctggggcagtggcacaaatgctaaggtgaat
ccaggtacaaactggggggagtctctcaagcctggtccccagcagaactgggctcataag
ccccaagacaacaatgtgagtaactggggaggagctgcttctgttaagcagacagggaca
gggtggattggggggccactgccagtcaagcagaaggacagcagtgaggcgactggctgg
gaggagccttccccaccctccatccgacgcaaaatggaaattgatgatggtacctcagct
tggggggacccaagcacctacaacaataaaactgtaaacatgtgggacagaaacaatcca
gtcatccagagcagtaccacagcccctgccacccccacgacccccacctcgagcagcacc
acacaccgggccgagacgccgccttcacaccaggctggcactcagctgaatcggtcacca
ctgctcgggccagtttcatccggctggggagagatgcccagtgttcactccaaggccgag
aactcctggggagagccatcttccccttgtaccctggtggacaatggcacagcagcgtgg
gggaagcctcccagcagtggcagtgggtgggatcatcctgctgagccggtggtgccattt
ggaagagccagcgctcctgctgccgccccagccctgtgcaaaccagcttccaaatctatg
caagaaggctggggcagcggtgcggatgaaatgaacctgggcaccagccagtgggaggat
gaggacggggacatgtggaacaacgctgcctcccaagaaagcagctcatcctgcagctcc
tggggcaacacctcaaaaaaaggacttcagaagggcatgaagactcctggcaagcaggat
gaggcctggatcatgagccggctgatcaaacaactcacagacatgggcttcccgagagag
ccagccgaagaggccttgaaaagcaacagtatgaaccttgaccaggccatgagtgctctg
ctggaaaagaaggtggacatggacaaacgtggactgggaatgaccgactacaatggaatg
gtcaccaaacccctcggctgccgcccaccaatctccaaagagtcttccatggaccgcccc
accttccttgacaagctcaccctttctttctccaatcaggatggcggcctcgtggaagag
cccacgacttcaccgtttttgccttccccaagcctgaagctccccctttccaacagtgca
ctccccagtcaggccctgggtggggttgcctcagggctgggcatgcaaaacttgaactct
tctagacagatcccgagtggcaatctgggtgtgtttggcaatagcggagcagcacaagcc
aggaccatgcagcagccgccagtgcagcctcttaattcctcccagcccagcctccgcgct
caagtgcctcagtttctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaa
aacattggtctcagccctgcactattaacctcgccaattaaccctcagcatatgacgatg
ttgaaccagctctatcagctgcagctggcataccaacgtttacaaatccagcagcagatg
ttacaggcccagcggaatgtttccggacccatgaggcaacaggagcagcaagttgcgcgc
acaatcactaatctgcagcagcagatccagcagcaccagcgccagctggcccaggccctg
cttgtaaagcagccaccacctccgccacccccgccgcacctgtctctgcacccctctgca
ggcaaatcgggcatggagagcttcccccctcccccccaggctcccggccttcccgacctg
cagaccaaagagcagcagtcttcacccaacacctttgctccttatcctcttgctggattg
aacccgaacatgaatgtcaacagcatagacatgagcagtggcttgtctgtgaaggacccg
tcgcagtcccagtcacgcctgcctcagtggacacatcccaactccatgggtaacttgtct
agtgctgcttctcccctggaccagaatcctagcaagcatggtgctatccctggaggtcta
agcatcgggcctccaggtaagtcctccattgatgactcttacggccggtacgatttaatt
cagaacagtgagtcaccagccagtcctcccgtagctgttccccatagctggtcacgtgcc
aaatctgacagtgataaaatctcaaatggctccagcatcagctggcccccagaattccac
cctggagttccatggaaaggacttcagaacattgaccctgagaatgaccctgatgtcacg
cctggcagtgtccctacaggacctaccatcaacaccaccatccaggatgtcaaccgctac
ctcctcaagagtggaggtaagctgtctgatattaaatcaacatggtcctcaggcccagcc
tctcacacgcaagcctctctgtctcatgagctgtggaaggtacccagaaacactactgca
cccaccaggccgcctccaggcttagccaatcccaagccttcctccacctggggcaccagc
cccctcggctggaccagctcctactcctcgggttctgcatggagcactgacacctcagga
agaacaagcagctggctcgttctgcgcaatctcacaccccagatcgatggttctacactt
cggacgctgtgtctgcagcatggacctctcatcacattccacctgaacctaacccagggc
aacgctgtagtccgctacagttctaaggaagaagccgccaaggcccagaagtctctgcac
atgtgtgtactgggaaacaccaccatcttggctgagtttgccggggaagaagaagtgaac
cggttcctggcccaaggccaagccctcccacccacctccagctggcagtccagcagcggg
ggcagccagcccagactgggcacctcgggcagcacccatggcctagtgcgcagcgacact
gcccactggaacaccccatgcctgagtggcaaaggcagcagtgagctgctgtggggtggg
gtcccccagtactccagcagcctgtggggcccgcccagtgctgaggacgccagagtgatc
ggcagccccacgcctctcaacactctgctgcctggggacctgctcagcggcgagtccatc
tag
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