Mus musculus (house mouse): 21841
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Entry
21841 CDS
T01002
Symbol
Tia1, 2310050N03Rik, TIA-1, mTIA-1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
21841 (Tia1)
03041 Spliceosome [BR:
mmu03041
]
21841 (Tia1)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
21841 (Tia1)
Spliceosome [BR:
mmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
21841 (Tia1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
Calcipressin
Flg_new_2
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
21841
NCBI-ProteinID:
NP_035715
MGI:
107914
Ensembl:
ENSMUSG00000071337
UniProt:
P52912
Q564E7
Structure
PDB
PDBj
LinkDB
All DBs
Position
6:86381001..86410387
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AA seq
386 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI
GYPPTYGQWGQWYGNAQQIGQYVPNGWQVPAYGVYGQPWSQQGFNQTQSSAPWMGPNYSV
PPPQGQNGSMLPSQPAGYRVAGYETQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatgcccaagactctatacgtcggtaacctttctcgagatgtgacagaa
gctctcatcctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacagcaggaaatgacccatactgttttgtggagttccatgagcaccgtcatgcagct
gcagccctggctgccatgaatgggcggaagataatgggtaaggaagtgaaagtgaattgg
gcaacaacccctagcagtcaaaagaaggatacgagcagtagtaccgttgtcagcacacag
cgttcacaagatcatttccatgtgtttgttggtgacctcagtccagaaatcacaaccgaa
gacatcaaagcagcgtttgcaccatttggaagaatttcagatgcccgtgtggtaaaagac
atggctaccgggaagtctaagggatatggctttgtctcctttttcaacaaatgggatgca
gaaaatgccattcagcagatgggtggccagtggcttggtggaagacaaatcagaactaac
tgggcaacccgaaagcctccagctccaaagagtacatatgagtcgaacaccaaacagctg
tcatatgatgaggttgtgagtcagtctagtcccaacaactgcactgtgtactgtggaggg
gtgacgtcaggactgacagaacaactaatgcgtcagactttttctccatttggacaaata
atggaaattcgagtcttcccagataaaggatactcatttgttcggttcagttcccatgaa
agtgcagcacatgcgattgtttctgttaatggtactaccattgaagggcatgtggtgaaa
tgttattggggcaaagagactcttgatatgataaaccctgtgcaacagcaaaatcaaatt
ggatatccaccaacatatggccagtggggccagtggtatggaaatgcacaacagattggc
cagtatgtgcctaacggttggcaagtacctgcctatggagtgtatggccagccatggagc
cagcaggggttcaatcagacccagtcttctgcaccgtggatgggacccaattacagtgtg
ccaccacctcaagggcagaatggcagcatgttgcctagtcagcctgctgggtatcgagtg
gccgggtatgaaacccagtga
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