Mus musculus (house mouse): 219257
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Entry
219257 CDS
T01002
Symbol
Pcdh20, C630015B17Rik, Pcdh13
Name
(RefSeq) protocadherin 20
KO
K16498
protocadherin delta 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
219257 (Pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmu01009
]
219257 (Pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmu04515
]
219257 (Pcdh20)
Protein phosphatases and associated proteins [BR:
mmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
219257 (Pcdh20)
Cell adhesion molecules [BR:
mmu04515
]
Cadherins
Protocadherins
219257 (Pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
219257
NCBI-ProteinID:
NP_848800
MGI:
2443376
Ensembl:
ENSMUSG00000050505
UniProt:
Q8BIZ0
Q68FM5
LinkDB
All DBs
Position
14:complement(88702183..88708832)
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AA seq
952 aa
AA seq
DB search
MRGRGNARSLLVQAVSLRPATWHPCLDMGHLHRPSSRTSHRNLPHVFLLFLFVGPFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRASGRQNQQLLHPERTASEGNPPLSFS
LASGGLSGQYVTLNNRSGELHTSAQEIDREALCLDGGGGAAWAGSTSIASSPSSDSCLLL
LDVLVLPQEYFRFVKVKIAIRDINDNAPQFPISEISVWVPENSPVNTRLAIEHPAVDPDV
GINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAEDGGSPP
LLGSATLTIGISDINDNCPLFIDSQINVTVYGNATVGTPVATVQAVDRDLGTNAQITYSY
SQKVPQETKDLFHLDEVTGVIKLSSKIGGSVLQTHKLTILANGPGCIPAVITALVSIIKV
VFRPPEIVPRYIANEVDGVVYLKELEPVNTPIAFFTIRDPEGKYKINCFLDGEGPFRLAP
YKPYNNEYLLETTKPMDYEVQSFYEIAVVAWNSEGFHVKRIIKVQLLDDNDNAPVFLQPL
IELTIEENNAPNAFLTKLYATDADSGEMGRVSYFLGPDAPSYFSLDSVTGILTVSTQLDR
EEKEKYRYTVRAVDCGTPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIG
VISVTDADAGRNGWVALSVMNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGE
PALSSTTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAV
IAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMV
NLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESMSCMPTLVALSVISLG
SITLVTGMGIYICLRKGKKHHREDDNLEVQIPLKGKIDLCMRERKPVDISNI
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggaacgcgcgcagcttgctggtccaggcagtgagcttgcgcccggcg
acctggcacccgtgcctggatatggggcatctacatcgtcccagcagcaggaccagccac
aggaacctgccgcatgtttttctgcttttcctcttcgtgggacccttcaattgcctcgcg
agttacagccgtgctaccgagcttctgtacagcctaaatgagggactgcccgccggagtg
ctcataggcagcctggcggaggacctgaggctgctgcctcgggcctctgggagacagaac
cagcagttgctgcatccagagcgcactgcctctgaggggaacccccctctctctttcagc
ttggcctccgggggactgagtggccagtatgtgaccctaaacaaccgctccggcgagctg
cacacttctgcacaggagatcgacagagaagcattgtgcctggatgggggcggtggggct
gcctgggccggcagtacctccattgcctcctctccttcttctgactcttgccttttgctt
ctggacgtgctggtcctgcctcaggaatattttcggtttgtgaaggtgaaaattgccatc
agggatatcaatgacaatgctccgcagttccccatttctgaaatctctgtttgggtccca
gaaaattcacctgtaaatacccgattggctatagagcatcctgctgtggaccctgatgta
ggcattaacggtgtgcaaacctatcgcttactagactaccatggcatgtttaccctggac
gtggaggagaatgagaacggggagcgcacaccctacttgattgtcatgggtgctttggac
agagaaacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccacca
ctgctgggcagtgccaccctcaccattggcataagtgacattaatgacaattgtcctctc
tttatagactcacaaattaatgtcaccgtttatgggaatgctacagtgggcaccccagtt
gcaacagtccaggctgtggatagagacttggggacaaatgcacagatcacttacagttac
agccagaaagttccacaggaaaccaaggatttattccacctggatgaagttactggagtc
attaagctttccagtaagattggcgggagtgtcctacagacacataagctcaccatccta
gctaatggacctggctgtatccctgcagtgatcactgctcttgtatcgatcatcaaagtc
gttttcagacccccagaaatcgtcccacgttatatcgcaaatgaggtggatggtgttgtg
tacctgaaagaactggagcctgttaatactccaattgcgttttttaccatcagagatcca
gaaggtaaatacaagattaactgcttcttggatggtgaagggccattcaggctggcaccc
tacaagccgtacaacaatgaatatttgttggagaccacaaagcctatggactatgaagtg
cagtccttctatgaaatagctgtagtggcctggaactcagagggatttcatgtcaagaga
atcattaaagtacaacttttagacgacaatgacaatgcccctgttttccttcagcccttg
atagaattgaccattgaagaaaacaacgcacccaatgcctttctgacaaagctctacgct
acagatgctgacagtggagagatgggacgagtttcctacttcttgggacctgatgctccg
tcatacttttccttagacagtgtcacagggattctgacagtttctactcagctggacaga
gaagagaaagagaagtacaggtatactgtccgagcagtggactgtgggacgccacccaga
gaatcagtggctacagtggccctcactgtgttggataaaaatgacaacagtccgaggttc
atcaacaaggacttcagcttttttgtcccagaaaactttccggggtatggtgaaattgga
gtcatcagtgtaacagatgccgatgctggaaggaacggatgggtagccctgtccgtaatg
aaccagagtgacatttttgtcatagacacaggcaagggtatgttgagagctaaagtctct
ttagacagagaacagcaaagctcttacactctgtgggtggaggctgttgacgggggtgag
cctgccctttcctctaccacaaaaatcacaattcttcttctggacatcaacgataaccct
cctcttgttttattccctcaatctaatatgtcttatttgctggtcctaccttctactctc
cctggctcaccagtaacagaagtctatgcggttgacaaagacacaggcatgaatgctgtc
atagcttatagcatcatagggagaagaggtcccaggcctgagtctttcagaattgacccc
aagactggcaacatcactctggaggaagccttgcttcagacagattatgggttgcatcgc
ttactggtgaaagtgagtgatcacggataccctgagcctctccactccacagtcatggtg
aacttatttgtcaatgacactgtcagtaacgagagctacattgagagccttttgagaaag
gagccagaaattaatatagaagagaaagaaccacaaatctcaatagagccaactcatagg
aaggtagaatctatgtcctgtatgcccacattggtagctctgtcagtcataagcttgggc
tccatcacactagttacagggatgggaatatacatctgcttacggaaaggtaaaaagcat
cacagggaagatgacaatttggaagtacagattccattgaaaggaaaaattgacttgtgt
atgagagagagaaaaccagtggatatttctaacatttga
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integrated database retrieval system
