Mus musculus (house mouse): 22083
Help
Entry
22083 CDS
T01002
Symbol
Ctr9, Sh2bp1, Tsbp, Tsp, mKIAA0155
Name
(RefSeq) CTR9 homolog, Paf1/RNA polymerase II complex component
KO
K15176
RNA polymerase-associated protein CTR9
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmu03021
]
22083 (Ctr9)
Transcription machinery [BR:
mmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
22083 (Ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_5th
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
22083
NCBI-ProteinID:
NP_033457
MGI:
109345
Ensembl:
ENSMUSG00000005609
UniProt:
Q62018
Q05CJ7
LinkDB
All DBs
Position
7:110628158..110655584
Genome browser
AA seq
1173 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFDEFVNDDTDDDLPVSKKKKRRKGSGSEQEGEEEEGGERKKKRR
RRPPKGEEGSEEEETENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSNSDSDDDERPNRRASSESDSDDNQNKSGSEAGSPRRSGRQESD
EDSDSDQPSRKRRRSGSEQSDNESVQSGRSPSGASENENDSRPASPSAESDHESEQGSDN
EGSGQGSGNESEPEGSNNEASDRGSEHGSDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagattcccctccgggatactgacgaggtcattgaacttgac
ttcgatcagttaccggagggagacgaagtcatcagcattctgaagcaggagcacacacaa
ctgcacatatggattgccttggcgctggaatactacaagcaagggaaaacagaagagttt
gtgaagctgctggaggcagcacggatagatggcaatttggactatcgagatcacgagaaa
gaccagatgacttgcttggatacattggcagcctactatgtacaacaggctcggaaagaa
aagaacaaggacaataagaaggaccttattacgcaggcaactttgttatatacaatggct
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgtctgctc
gagggcgacaaaatggaccaagctgacgcacagtttcactttgtacttaaccagtctcca
aacaatattccagcccttcttgggaaagcttgtatttcattcaacaagaaggattacaga
ggagctctggcttactataaaaaagcattgcgcactaacccgggatgtccagctgaagtt
cgtttaggaatgggccattgctttgtcaaacttaacaaactggaaaaagctcgactggca
ttcagcagagccctggaactcaactcgaagtgtgtgggagcactggttggactggctgtt
ctagaactcaacaataaagaggctgattccatcaaaaatggcgtgcagcttctttccaga
gcctatactattgatcctagcaacccgatggtactgaaccatttggcaaaccactttttc
ttcaagaaggattatagtaaagtgcagcacctggctctccacgcattccacaacaccgag
gtggaggctatgcaagcagaaagctgttaccagctggctcggtccttccatgttcaggaa
gattatgaccaagcctttcagtactactatcaagccacacagtttgcttcatcttccttt
gtcctaccattttttggtttgggacaaatgtatatttatcgaggtgacaaagagaatgca
tctcagtgctttgagaaagttttgaaagcttatccgaacaattatgaaactatgaaaatt
cttggctctctctatgctgcttcagaagatcaggagaaacgagacatagccaagggccat
ttgaagaaggtcacagaacagtatcctgatgacgtggaagcttggattgagttggcccag
atcttagaacagactgacatacagggtgccctttcagcttatggaacagccacacgcatc
ctgcaggagaaagtgcaggccgatgtccctcccgagattttgaataatgttggggccctc
cattttagactcggaaacctgggggaagcaaagaaatacttcctggcctcactggaccgc
gcaaaggcagaggccgagcatgatgaacactactacaatgccatctctgtcaccacatcc
tacaatttagccaggctctatgaggccatgtgtgaatttcacgaagcagagaaactgtac
aaaaacattttacgagagcatcctaactacgttgattgctatctacgcctaggagccatg
gccagagataaaggaaacttctatgaagcttcagactggtttaaggaagcccttcagatc
aatcaggatcatccggatgcctggtctttgattggtaacctccatctggcaaaacaagaa
tggggcccaggtcagaagaagtttgagaggatattaaaacagccagccacacagagtgac
acctactctatgctggcccttggcaatgtgtggctccagactttgcatcagccaacccga
gaccgagaaaaggaaaagcgccatcaagaccgtgccctggccatctacaaacaagtcctc
agaaatgatgccaagaacctgtatgctgccaatggcataggagctgtcttggcccacaaa
ggatacttccgtgaagctcgtgatgttttcgcccaagtgagagaagcaacagcagatatc
agtgatgtgtggttgaacctagcacacatctacgtggagcagaagcagtatatcagcgcc
gttcagatgtatgagaactgcctcagaaagttctataagcaccaaaacactgaggttgtg
ctctacctggcccgcgccctcttcaagtgcggcaagctgcaggagtgcaagcagactctg
ctgaaggccagacacgtggcacccagtgacacagttctgatgtttaatgtggccttggtc
ttgcaaagattagctacctctgtcctgaaagatgaaaaaagtaatctgaaggaagtcctt
aatgctgtgaaagagctggagctcgcacacaggtacttcagttacttgagcaaagttgga
gataaaatgagatttgatttggcccttgctgcctctgaagccaggcagtgctctgactta
ctgagccaggcccagtaccatgtggcccgggcacgcaagcaggatgaggaagaacgggag
ctgcgggccaagcaggagcaggaaaaggagctcttaagacagaagcttctcaaagagcag
gaagagaaacgtctcagagaaaaggaagaacaaaagaaacttttggaacagcgtgcccag
tatgtggagaagaccaaaaatatccttatgttcactggcgagactgaagcaacaaaggag
aagaaaagaggtggaggtggagggcggcgttccaagaaaggaggcgagtttgatgaattt
gtcaacgatgacaccgacgatgacctccctgtatccaaaaagaagaagagaaggaagggc
agtggcagtgaacaggaaggcgaagaagaggaaggtggagagaggaagaagaagaggagg
agaagacctccaaagggagaagagggatctgaggaggaggagacagaaaatggccccaaa
ccaaagaagcgccgcccaccgagagcagagaaaaagaaggctcccaagccagaacgcctg
cctccttcaatgaagggaaaaataaaatccaaagccattatatcatcaagtgatgattct
tcagatgaggataaactgaaaattgctgatgaaggacatcccaggaatagcaacagcgat
tctgatgacgacgagaggcccaacagacgcgcctcatctgagagcgactcagatgacaac
cagaacaagtctggcagcgaggcaggcagccctcggaggtcgggtagacaggagtcggat
gaggattccgacagtgaccagccgtccagaaagagaaggcgctccggctctgagcagtcg
gacaatgagtctgtgcagtcagggagaagcccctccggagcttctgagaacgagaacgat
tctcgcccggcttctccaagtgcagaatcggaccacgaatcagagcagggctctgacaac
gagggctctggccaaggctctggaaatgaatcagaaccagagggctcaaacaacgaggcc
tcagaccgaggctcagaacatgggtcagatgatagcgactag
DBGET
integrated database retrieval system
