Mus musculus (house mouse): 22329
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Entry
22329 CDS
T01002
Symbol
Vcam1, CD106, Vcam-1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04064
NF-kappa B signaling pathway
mmu04514
Cell adhesion molecules
mmu04668
TNF signaling pathway
mmu04670
Leukocyte transendothelial migration
mmu04933
AGE-RAGE signaling pathway in diabetic complications
mmu05143
African trypanosomiasis
mmu05144
Malaria
mmu05417
Lipid and atherosclerosis
mmu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
22329 (Vcam1)
04668 TNF signaling pathway
22329 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
22329 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
22329 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
22329 (Vcam1)
05143 African trypanosomiasis
22329 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
22329 (Vcam1)
05418 Fluid shear stress and atherosclerosis
22329 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
22329 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mmu04090
]
22329 (Vcam1)
04091 Lectins [BR:
mmu04091
]
22329 (Vcam1)
CD molecules [BR:
mmu04090
]
Proteins
22329 (Vcam1)
Lectins [BR:
mmu04091
]
I-type lectins (Siglecs)
22329 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
C2-set
ig
Ig_2
V-set
ICAM_N
C2-set_2
Ig_6
Ig_5
Ig_4
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
22329
NCBI-ProteinID:
NP_035823
MGI:
98926
Ensembl:
ENSMUSG00000027962
UniProt:
Q3UPN1
LinkDB
All DBs
Position
3:complement(115903669..115923337)
Genome browser
AA seq
739 aa
AA seq
DB search
MPVKMVAVLGASTVLWILFAVSQAFKIEISPEYKTIAQIGDSMALTCSTTGCESPLFSWR
TQIDSPLNAKVRTEGSKSVLTMEPVSFENEHSYLCTATCGSGKLERSIHVDIYSFPKDPE
IQFSGPLEVGKPVTVKCLAPDIYPVYRLEIDLFKGDQLMNRQEFSSEEMTKSLETKSLEV
TFTPVIEDIGKALVCRAKLHIDQIDSTLKERETVKELQVYISPRNTTISVHPSTRLQEGG
AVTMTCSSEGLPAPEIFWGRKLDNEVLQLLSGNATLTLIAMRMEDSGVYVCEGVNLIGRD
KAEVELVVQEKPFIVDISPGSQVAAQVGDSVVLTCAAIGCDSPSFSWRTQTDSPLNGVVR
NEGAKSTLVLSSVGFEDEHSYLCAVTCLQRTLEKRTQVEVYSFPEDPVIKMSGPLVHGRP
VTVNCTVPNVYPFDHLEIELLKGETTLMKKYFLEEMGIKSLETKILETTFIPTIEDTGKS
LVCLARLHSGEMESEPKQRQSVQPLYVNVAPKETTIWVSPSPILEEGSPVNLTCSSDGIP
APKILWSRQLNNGELQPLSENTTLTFMSTKRDDSGIYVCEGINEAGISRKSVELIIQVSP
KDIQLTVFPSKSVKEGDTVIISCTCGNVPETWIILKKKAKTGDMVLKSVDGSYTIRQAQL
QDAGIYECESKTEVGSQLRSLTLDVKGKEHNKNYFSPELLALYCASSLVIPAIGMIVYFA
RKANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaagatggtcgcggtcttgggagcctcaacggtactttggatactgtttgca
gtctctcaagcttttaaaatcgagatctcccctgaatacaaaacgattgctcaaatcggt
gactccatggccctcacttgcagcactacgggctgcgagtcaccattgttctcatggaga
acccagatagacagcccactaaacgcgaaggtgaggacggaggggtccaagtccgttctg
accatggagcctgtcagttttgagaatgaacactcttacctgtgcacagcaacatgtggc
tctgggaagctggaacgaagtatccacgtggacatctactctttccccaaggatccagag
attcaattcagtggccccctggaggttgggaagccggtcacggtcaagtgtttggctcca
gacatttacccagtttacaggctggagattgatctgttcaagggtgaccagctcatgaac
agacaggagttttcttcagaagagatgacaaagtctctagaaaccaagagtttggaagta
acctttactcccgtcattgaggatattggaaaagctcttgtttgccgagctaaattacac
attgaccaaattgattctacactcaaagaaagggagactgtcaaagaactacaagtctac
atctctcccaggaatacaacgatctctgtacatccctccacaaggcttcaagagggtggt
gctgtgacaatgacctgttccagcgagggtctaccagctcctgagattttctggggcagg
aagttagataatgaagttctccagcttctctcaggaaatgccaccctcaccttaattgct
atgaggatggaagactctggagtctatgtgtgtgaaggagttaatctgattgggagagac
aaagcagaagtggaattagttgttcaagagaaaccatttattgttgacatctcccccgga
tctcaggtggctgcacaagttggggattcggttgttctgacgtgtgctgctattggctgt
gactccccttctttttcttggagaacccagacagacagtcccctcaatggggtggtaagg
aatgagggggccaaatccacgcttgtgttgagctctgtgggttttgaggatgaacactct
tacctgtgcgctgtgacctgtctgcaaaggacactggaaaagagaacccaggtggaggtc
tactcattccctgaagatccagtaattaaaatgagtgggccacttgtgcatgggagacct
gtcactgtcaactgcacagtccctaatgtgtatccctttgaccatctggagattgaatta
ctgaagggggagactacactgatgaagaaatattttttggaggaaatgggcataaagtcc
ctagagaccaaaattttggaaacgaccttcatccccaccattgaagataccgggaaatct
cttgtttgcctcgctaggttacacagtggtgaaatggaatctgaacccaaacagaggcag
agtgtacagcctctttatgtcaacgttgcccccaaggaaaccaccatctgggtcagcccc
tctcctatactagaggagggcagtcctgtgaacctgacctgctcaagtgatgggatacca
gctcccaaaatcctgtggagcagacagctaaataatggggaactgcagcctctttctgaa
aatactacactcaccttcatgtctacaaaaagggacgattccggcatttatgtgtgtgaa
gggattaacgaggctggaattagcagaaaatcagttgaactgattatccaagtctctcca
aaagatatacagcttacagtctttccatctaagagtgtcaaagagggagacaccgtcatt
atctcctgcacttgtggaaatgtgcccgaaacatggataatcctgaagaagaaagcaaag
acaggagacatggtattaaagtctgtggatggctcgtacaccatccgccaggcacagctg
caggatgccggcatatacgagtgtgaatctaagactgaagttggctcacaattaagaagt
ttaacacttgatgtaaaaggaaaagaacataacaagaactatttttcgcccgaactcctt
gcactctactgcgcatcttccttggtaatacctgccatcgggatgatcgtttattttgca
agaaaagctaacatgaaaggatcgtacagtctggtggaggcacagaaatccaaagtgtag
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