Mus musculus (house mouse): 224705
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Entry
224705 CDS
T01002
Symbol
Vps52, ARE1, D130068D18, D430041K17Rik, SAC2, Sacm2l, tclw5
Name
(RefSeq) VPS52 GARP complex subunit
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
224705 (Vps52)
Membrane trafficking [BR:
mmu04131
]
Protein recycling
Others
EARP complex
224705 (Vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
224705 (Vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Dor1
Sec3_C-term
COG6_N
ATG16
Motif
Other DBs
NCBI-GeneID:
224705
NCBI-ProteinID:
NP_766208
MGI:
1330304
Ensembl:
ENSMUSG00000024319
UniProt:
Q8C754
LinkDB
All DBs
Position
17:34174753..34186012
Genome browser
AA seq
723 aa
AA seq
DB search
MAAAATMAAAARELVLRAGASDVEEEEGPLGGGSGLQEPLQLGELDITSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSA
LVTAILEAPVTEPRFLEQLQELDAKAAAVREQEAMGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQAALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYY
RSYVGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGTVISPAELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFIVSGPAAHDLFHAVMG
RTLSMTLKHLESYLADCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTLQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKASVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcagcgaccatggcggccgctgcccgggagctggtgttgcgggctggggcc
tcagatgtagaggaggaggagggcccgctgggggggggttctggactccaagaaccccta
caacttggagagttggacatcacctctgatgaattcatcttggatgaagtggatgttcac
atccaggcaaacctggaggatgagttagtgaaggaagctctcaaaacgggtgtggatctt
cgacactattcaaagcaggtggagctggagctgcagcagattgagcagaagtcaatccgg
gactatatccaagagagtgaaaacatagcgtctctgcacaatcagatcacggcctgtgac
gccgtcctggagcgcatggaacagatgctgggagcttttcagagcgatctcagctccatc
agctctgagatccgaaccctgcaggagcagtcgggggccatgaacatccgacttcgtaac
cgacaggcagttcgggggaaacttggggaacttgtggatgggctggtggtgccctctgct
ctggtcacagcaattctggaagctccagtgaccgagcccaggttcctggagcagctacag
gagctggatgccaaggcagccgcggtgagagagcaggaggctatgggcaccgctgcctgt
gctgacgtcagaggcgtgctggaccggctccgggtcaaggcagtgacgaagatccgggag
tttattctccagaagatctactccttcagaaagcccatgaccaactaccagatcccccag
gcggccctgctgaagtacaggtttttctatcagttcctgctgggtaatgagcgtgctaca
gccaaggagatcagggatgagtacgtagagacgctgagcaagatctacctgtcctactac
cgatcctatgtggggcggctcatgaaagtgcagtacgaggaagttgctgagaaagacgac
ctaatgggtgttgaagacacagcaaagaaaggcttcttctcgaagccgtccctccgaagc
aggaacaccatctttacccttggcactcgtggtactgtcatctcaccggccgagctggag
gcccccatcctagtgccccatactgcccaacgtggagagcagaggtatccattcgaagcg
ctcttccgcagccagcactatgccctcctcgacaattcttgccgtgaatatcttttcatc
tgtgaatttttcatcgtgtctggcccggctgcacatgacctgttccacgccgtcatgggc
cgcacgctctccatgacgctgaaacacctggagtcctacctggctgactgctacgatgcc
attgctgtttttctctgtatccacattgttctccggttccgcaacattgcagcgaagagg
gacgtccctgccctggacaggtactgggagcaggtgcttgccttgctgtggcctcggttt
gagctgatcctggagatgaatgtccagagtgtccgcagcactgacccccagcgccttggg
ggactggacactcggccccactatatcacacgccgctatgctgagttctcctctgcactt
gtcagcatcaaccagacgatccccaatgaacgcacgctgcagctcctgggacagctccag
gtggaggtggagaattttgtcctccgagtggctgcagagttctcctccaggaaggagcag
cttgtgtttctgatcaacaactatgacatgatgctcggggtgctgatggagcgggctgct
gatgacagcaaagaggtggaaagtttccagcagctgctcaatgctcggacacaggagttc
attgaggagctgctgtctccccccttcgggggtctggtggcattcgtgaaggaggctgaa
gccttgattgagcgtgggcaggctgagcggctccgaggggaggaagcccgagtcactcag
ctgatccgtggctttggtagttcctggaaggcatcagtggagtccctgagtcaggatgta
atgcgaagttttaccaacttccgaaatggaaccagcatcatccagggggcgctgacccag
ctgatccagctctaccatcgcttccaccgggtgctgtctcagccccagctccgcgcactc
ccggccagggccgagctcatcaacatccatcacctcatggtggagctgaagaaacacaag
ccgaacttctga
DBGET
integrated database retrieval system
