Mus musculus (house mouse): 225160
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Entry
225160 CDS
T01002
Symbol
Thoc1, 3110002N20Rik, NMP-84, tho1
Name
(RefSeq) THO complex 1
KO
K12878
THO complex subunit 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
225160 (Thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
225160 (Thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
225160 (Thoc1)
03041 Spliceosome [BR:
mmu03041
]
225160 (Thoc1)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
225160 (Thoc1)
Spliceosome [BR:
mmu03041
]
Complex C
Other components
EJC/TREX
225160 (Thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
225160 (Thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
225160
NCBI-ProteinID:
NP_705780
MGI:
1919668
Ensembl:
ENSMUSG00000024287
UniProt:
Q8R3N6
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All DBs
Position
18:9958176..9995486
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AA seq
657 aa
AA seq
DB search
MSPTPALFSLPEARTRFTKSTREALNNKNIKPLLTAFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSACENVLAIISLAIGGVTESVCTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERASDTKPTRVVRKRAAPE
DFLGKGPNKKILIGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPITGEQIESFANKLGEQWKILAPYLEIKDSDIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATTDNLISALNKSGLSDLAESLTNDTETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccggcgcttttcagtttgccggaggcgcggacgcgatttacgaaatct
accagagaagccttgaataacaaaaatatcaagccgttgttgactgccttcagtcagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctggaa
gaagaaattataaatcattccgcatgtgagaacgttttagctattatttctcttgctatt
gggggagtgaccgaaagtgtttgtactgcgtccacaccatttgtgctattgggagatgtc
ttagactgccttcctttggatcagtgtgacacaatattcacttttgttgaaaaaaatgtt
gctacttggaagtcaaatacattctattctgctggcaaaaattatttactgcgtatgtgc
aatgatctcctcagaagattgtctaaatctcagaatacagttttctgtggaagaattcaa
ctctttttggccaggctttttcctctatctgagaaatcaggtcttaatttgcagagtcag
tttaacctggaaaacgtcactgttttcaatacaaacgagcaggagagcaccctgggtcag
aagcatactgaggatagagaggaagggatggatgtagaagaaggtgaaatgggagatgat
gaagccccgacaacttgttctattccaattgattacaacctgtatagaaaattctggtca
cttcaggattacttcaggaacccagtgcaatgctatgagaagatttcttggaaaacgttt
ctcaagtattctgaagaagttttagctgtttttaaaagttataaattagatgatactcaa
gcctccaggaaaaagatggaagaattgaaaacaggaggagagcatgtatacttcgccaag
tttctaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgtcgacac
atcctgttgcagtatctcattttatttcaatatctcaagggacaggtcaaattcaaaagt
tcaaattatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtc
taccaactgctatctgaaaatccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaggaaaattggaactcatggaagaatgaaggttgcccaagttttgtt
aaagaaagagcgtcagataccaagcccacaagagtggtgaggaagagagcagccccagaa
gacttcttaggcaaagggcccaacaagaaaatcctcattggaaatgaggagctcacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagagaatacatg
ccaactttggaggagttctttgaagaagctattgaacaagcagatcctgaaaacatggtt
gaaagtgaatataaagccgtaaataattcaaattatggatggagagctcttagactctta
gcccggagaagccctcacttctttcagccaaccaaccagcagtttaagagtctaccagag
tatctggaaaacatggtgataaagctggccaaggaactaccacccccttctgaagaaata
aagacaggtgaggatgaagacgaggaagataatgatgctttactaaaggaaaatgaaagt
ccagatgttcggcgagataaacctataacaggggagcagatagagtcatttgccaacaaa
cttggtgagcagtggaagattttggctccttacctggaaattaaagactctgatattagg
cagattgagtgtgacagtgaagacatgaagatgagagccaagcagctccttgttgcctgg
caagatcaagaaggagttcatgcaacaactgataacctgattagtgcactaaacaagtct
ggattaagtgaccttgcagaaagtctaactaatgacactgaaacaaacagttag
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