Mus musculus (house mouse): 227099
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Entry
227099 CDS
T01002
Symbol
Pms1
Name
(RefSeq) PMS1 homolog 1, mismatch repair system component
KO
K10864
DNA mismatch repair protein PMS1
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmu03400
]
227099 (Pms1)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
227099 (Pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HMG_box_2
HATPase_c_3
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
227099
NCBI-ProteinID:
NP_705784
MGI:
1202302
Ensembl:
ENSMUSG00000026098
UniProt:
Q8K119
LinkDB
All DBs
Position
1:complement(53225794..53336190)
Genome browser
AA seq
917 aa
AA seq
DB search
MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGEG
IKAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADDFSTQ
YVLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISYG
VLKPDVRITFVHNKAVIWQKSRVPDHRMALMSVLGTAVMGNMESVEQHCEQSQIYLSGFF
PKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFFLKID
VPSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCYGPLPTTESSENNRVDISSANMVV
SQTAETDVLFNKMESFGNNYPNADTSAIHFQKDESRKNIDHHLNEQINIGNYFDGHFSGD
INKDTFQNIPMNNLSSETNQSNHSETHSVGSMEHIQGENGRNGTGGSGGDGRETLPEKAL
EICADDWSKGNLCNSMGENIEPVKILVPQKSLSCKVTSSHPRLEPETLSDGPCSRTSDVI
HNRSGRLTAYDLISSRAVKKPMSASALFIQDHRTQFLTENPKTGLEDATEQIKARWETLS
EEEKHKYEEKAKKDLERYNNQMKKAIEQETQVSLKDGRKKRATSSWGWTQKHKVKDSSNQ
PKLDELFQSQNEKKKSENIKITEIPFSMENLKANLKKQKEVDLEEKDEIYLIHSLKFPDS
WLVTSRADVMLLNPYRVEEALLFKRLLENHKLLAEPLEKPIILTESLLNGSHYLEVLYKM
STVEERGSGSAYLCDPRLTANGFKIRLTPGVSSTENYLEIEGMAQCLPFYGIMDLKEILN
AIVNKNAKEIYECRPRKVINYLEGEAVRLSRQLPMYLPREDVQDLIYRMKHQFGKEIKGC
VHGRPFFHHLTHLPGTS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctgcagcaacagttcgcctcctgtccagttctcagacaatcacgtca
gtggtcagcgttgtgaaagagctcattgaaaactccttggatgccggagccaccagcatt
gaagttaaactggagaactatggatttgataaaattgagattcgggacaatggtgagggc
atcaaggctgtagatgtccctgtaatggcagtgaagtactacacctcgaagatcagcagt
catgaagaccttggaaatctgacaacttatggttttcgtggtgaagccttggggtcaata
tgtaatgttgcggaggtggtagttacaacaaggacatctgctgatgactttagcactcag
tatgttttagatggcagtggccacatactttctcagaagccttcacatcttggtcaaggt
acaactgtaactgctctaaagttgtttaagaatctgcctgtaagaaaacaattttactca
acagctaaaaagtgtaaagatgaactaaaaaatgtacaggaccttctcataagctacggt
gtcctgaaacctgatgtgaggattacttttgtacataataaggcagttatttggcagaaa
agcagagttccagatcacaggatggctctaatgtcggttctgggaactgctgtcatgggc
aacatggaatctgttgagcagcactgtgaacagtcgcagatttacctaagtggattcttc
ccaaagcacgatgcagaccacaattccacaagtctttcaaccccagagagaagtttcatc
tttattaatagtcggccagtacatcaaaaagatatactaaagttaattcgacgctattat
aatctgaagtgcctaaaggagtctacccgcttgtatcccattttctttctgaaaattgat
gttccatcagctgaggtggatataaatctaacaccagataaaagtcaagtgttattacag
aataaggaatctgttttaattgctcttgaaaatctgatgatgacctgttacggaccacta
cccactacagagtcttctgaaaataacagagtagatatttcctcagccaacatggttgtt
agtcaaacagccgaaacagatgtgctttttaataaaatggaatcatttggaaataattat
ccaaatgctgatacttcggctattcacttccaaaaggatgaatctagaaaaaacattgat
catcatttaaatgaacagataaatataggcaattattttgatggtcattttagtggtgac
attaataaggacacatttcaaaatattcctatgaataatttatcatcagagactaatcag
agtaatcacagtgaaactcattctgtaggttctatggagcacatccaaggagaaaatggc
aggaatggtacaggaggaagtgggggagatgggagagaaacacttcctgagaaagctctg
gaaatctgtgcagacgattggagcaaaggaaatttgtgtaattcaatgggagagaatatc
gaacctgtgaaaattttagtgccacaaaagagcttatcatgtaaagtgaccagtagtcac
ccacgccttgaaccagagactctcagtgatggtccttgtagcagaacatcagatgtaatc
cataacagatctggacggcttacagcctatgacttaattagcagtcgagcagtcaagaag
cccatgtcagccagtgccctgttcattcaagaccaccgcactcagttcctcacagagaat
cccaagactggtttggaggatgcgacagaacaaatcaaagcacgatgggagacactgagt
gaagaggaaaagcacaaatacgaggaaaaggctaaaaaagacttggaacgatacaataac
caaatgaagaaagctattgaacaggagacacaagtatcattgaaagacggcaggaaaaaa
agggccaccagttcgtggggctggacacagaaacataaggtgaaagactcatctaatcag
ccaaaacttgatgagctctttcagtcccagaatgaaaagaagaagagtgaaaatattaaa
ataacagagattcccttttctatggaaaacttaaaagcgaacttgaagaaacaaaaggaa
gttgacttagaggagaaggatgagatttacctgatccacagtctcaagtttcctgattcg
tggctggtcacgtccagagccgatgtcatgttactgaacccatacagagtggaggaagcc
ctgctatttaaaagacttcttgagaatcataaactccttgcagaaccactggaaaagcca
attatattaacagagagtcttcttaatgggtctcattatctagaggttttatataaaatg
tcaacagttgaagaaagaggcagtggatcagcttacctgtgtgaccctcgtcttacagca
aatggcttcaagatcagattgacaccaggagtttccagtactgagaactacttggaaata
gaaggaatggctcagtgtctcccattctatggaataatggatttaaaggaaattcttaat
gctatagtaaacaaaaatgcaaaggagatttatgaatgtagacctcgaaaagtaataaat
tatctggagggagaagccgtccgtctatccagacagctacccatgtacttaccaagagag
gatgtccaagatcttatctatagaatgaagcaccagttcggaaaagaaattaaaggctgt
gttcatggccgcccattttttcatcatttgacccatcttccaggaacttcatga
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