Mus musculus (house mouse): 228545
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Entry
228545 CDS
T01002
Symbol
Vps18, 9930024E13Rik
Name
(RefSeq) VPS18 CORVET/HOPS core subunit
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04140
Autophagy - animal
mmu04148
Efferocytosis
mmu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
228545 (Vps18)
04148 Efferocytosis
228545 (Vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
228545 (Vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
228545 (Vps18)
Membrane trafficking [BR:
mmu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
228545 (Vps18)
Hops complex
228545 (Vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-RING_16
zf-C3HC4_2
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
228545
NCBI-ProteinID:
NP_758473
MGI:
2443626
Ensembl:
ENSMUSG00000034216
UniProt:
Q8R307
LinkDB
All DBs
Position
2:119119220..119128934
Genome browser
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQTGCPSVGIPHSGYVSAHLEKEVPIFTKQRVDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKASEPNRVELGRKDDAKVHKMFLDHTGSHLLVALSSTE
VLYMNRNGQKARPLARWKGQLVESVGWNKAMGNESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAVEDTE
AQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQHRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLAGL
KPTERTQATLLTTWLTELYLSRLGALQGDPDALTLYRDTRECFRTFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgagtacgaggactcattgtcccgctcggccgtcttgcagact
ggttgccctagcgtgggcatcccccattctgggtatgtaagtgcccacctggagaaggag
gtgcccatcttcaccaagcagcgggttgacttcaccccctcggagcggatcactagcctc
gtggtctcctgcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac
ttgggcaaggcaagtgagcccaaccgtgtggaactggggcgcaaggacgacgccaaagtc
cacaagatgttcctggaccatactggctctcatctgctggttgcgctgagtagcaccgag
gtcctttacatgaaccgcaatggacagaaggcccggcccctggctcgctggaagggacag
ctggtggagagtgtgggatggaacaaggccatgggcaacgagagcagcaccggccccatc
ctggtcggcacagctcaaggacagatctttgaagcagagctctcagctagcgagggtggc
ctctttggccctgccccagatctctacttccgtccactgtatgtgttaaatgaagaaggg
ggtccagcccctgtgtgctccctcgaggctgagcgtggccccgatggccgaggctttgtc
attgccaccactcggcagcgcctcttccagttcataggccgagctgtggaagatactgaa
gcccagggcttcgcaggactctttgctgcctatacagaccacccgcccccattccgtgag
tttcctagcaatttggggtatagtgagttggctttctatacccctaagttacgctcggca
cctcgcgcctttgcctggatgatgggagatggagtgctgtatggctcactggactgcggg
cgtcctgactcgctgctgagtgaggagcgagtgtgggaatacccagcgggggttggtcct
ggggccaatccacccttagccatcgtcctgacccagttccatttcctactgctgctggcc
gaccgggtggaggctgtgtgcacgctaacagggcaggtggtgctacgggatcacttcctg
gagaagtttggaccactgaggcacatggtgaaggactcatccacaggccacctatgggcc
tacactgagcgtgcggtcttccgctaccatgtgcaacgtgaggcacgggatgtctggcgc
acctacttggacatgaaccgctttgacctggccaaagagtattgtagagagcggcctgat
tgcctggacacggtcctggcccgagaggctgatttctgttttcgtcagcatcgctacctg
gagagcgcccgctgctacgcgctgacccagagctattttgaggagattgccctcaagttc
ttggaggcccggcaagaggaggcgctggccgagtttcttcagcggaaactggccggcttg
aagccgacggagcgtacccaggccacactgctgaccacttggctgacagagctctacctg
agccgcctgggtgctctgcagggtgacccagatgctctgactctctaccgggacacacgg
gagtgtttccgtacttttctcagtagccctcggcacaaagagtggctctttgccagccgg
gcctctatccacgagctgctcgccagtcacggagacacagagcacatggtgtattttgca
gtgatcatgcaggactatgaacgggtggtcgcataccactgccagcatgaggcttacgag
gaggccctggctgtgcttgcccgccaccgggacccccagctcttctacaaattctccccc
attctcatccgccacatcccccgccagctcgtagacgcctggattgagatgggcagccgg
ctggatgctcggcagctcatccctgccctggtgaactacagccagggcggtgaggcccag
caggtgagccaggccatccgctacatggaattctgcgtgaatgtgctcggtgagacggag
caggccattcacaactacctgctgtccctgtatgcccgtggccagccagcctcacttctg
gcatacctggaacaagctggggccagcccgcaccgtgtacattatgatctcaaatatgca
cttcgactttgtgctgagcacggccaccaccgcgcctgcgtccatgtctataaggtgttg
gagctatatgaggaggctgtggacctggccctgcaggtggatgtggacctggccaagcag
tgtgcagacttgccggaggaggatgaggaacttcgcaagaaactatggctcaagatcgcc
cggcacgtggtgcaggaggaagaagacgtccagacagccatggcctgcttggccagctgc
cccttgctcaagatcgaggatgtgctgcccttcttccctgactttgtcaccatcgaccac
ttcaaggaggcaatctgtagttccctgaaggcctacaaccaccacatccaggagctgcag
cgcgagatggaagaagccacagccagtgcccagcgcatccgacgagacttgcaggagctc
cgaggccgctatggcaccgtggagccccaggacaaatgctccacctgtgactttcctttg
ctcaaccgacccttttacctgtttctctgtggccacatgtttcacgctgactgtctccta
caggctgtgcggcccggcctccctgcctacaagcaggccagacttgaggaactgcagcgc
aagcttggggcggcgcctcctccgaccaaaggctccgtgaaggccaaggaggcagaagct
ggggctgcagcggtggggcccagtcgggagcagctcaaggctgacctggatgagctggtg
gctgctgagtgtgtgtactgtggggagctgatgattcggtctatcgaccggcccttcatt
gatccgcagcgctatgaggaggagcacctcagctggctatag
DBGET
integrated database retrieval system
