Mus musculus (house mouse): 230596
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Entry
230596 CDS
T01002
Symbol
Prpf38a, 2410002M20Rik
Name
(RefSeq) PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
230596 (Prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
230596 (Prpf38a)
Spliceosome [BR:
mmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
230596 (Prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
230596 (Prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
230596
NCBI-ProteinID:
NP_766285
MGI:
1916962
Ensembl:
ENSMUSG00000063800
UniProt:
Q4FK66
B2RTE3
LinkDB
All DBs
Position
4:complement(108422064..108436533)
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFVLMHVDEFIYELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPALRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacagtgaaggatgcccacagcatccatggcaccaaccctcagtatctg
gtggagaagatcatccggacgcgaatctatgaatcaaagtactggaaagaagagtgtttt
ggacttacagctgaacttgtagtggacaaagccatggagttaaagttcgttggtggtgtg
tatggtggaaacataaagccaactccttttttgtgtttaaccttgaaaatgcttcagatt
caacctgagaaggatatcattgttgagttcataaaaaatgaagatttcaagtatgtccgg
atgctgggggcactttacatgcggctcacaggaactgcaattgattgctacaagtacttg
gagcctttgtacaatgactatcgaaaaatcaagagccagaaccgaaatggagagtttgtg
ctgatgcatgtagatgagttcatttatgaactcctgcacagtgagagagtctgtgatatc
attttgccccggctacagaaacggtatgtgctggaagaagctgagcaactggagcctcga
gttagtgccctagaagaggacatggatgatgtggagtctagtgaggaagaggaggaggaa
gatgagaagcttgaaagagtgccatcacctgaccatcgaagaagaagctacagagatttg
gacaagccaaggcgttcacctgcactgcgctacaggaggagccggagtcgttctcccaga
aggcggagtagatcccctaaaagaagaagtccttctccccgaagagaaaggcataggagc
aagagtccacgacgccatcggagcaggtctagagacagacgacacaggtcccgctctaaa
tccccaggtcaccaccgtagtcacagacatagaagccactcaaagtctcctgaaaggtct
aagaaaagccacaagaagagccggaggggaaatgagtaa
DBGET
integrated database retrieval system
