Mus musculus (house mouse): 231386
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Entry
231386 CDS
T01002
Symbol
Ythdc1, A730098D12Rik, mKIAA1966
Name
(RefSeq) YTH domain containing 1
KO
K20100
YTH domain-containing protein 1
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmu03041
]
231386 (Ythdc1)
Spliceosome [BR:
mmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
231386 (Ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
231386
NCBI-ProteinID:
NP_808348
MGI:
2443713
Ensembl:
ENSMUSG00000035851
UniProt:
E9Q5K9
Q8C4W4
LinkDB
All DBs
Position
5:86951349..86984518
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AA seq
736 aa
AA seq
DB search
MAADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKNEKKGSKRKSERMESTDTKRQ
KPSIHSRQLISKPLSSSVSNNKRIVSTKGKSVTEYKNEEYQRSERNKRLDADRKIRLSSS
SSREPYKSQPEKTCLRKRDSERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEDYG
SDHETGSSGSSEQGNNTENEEEGGEEDVEEDEEVDEDAEDDEEVDEDAEEEEEEDEEEEE
DEDEDEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKK
ERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARFFL
IKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFARLSSES
HHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQE
IELECGTQLCLLFPPDESIDLYQLIHKMRHKRRMHSQPRSRGRPSRREPVRDVGRRRPED
YDIHNSRKKPRIDYPPEFHQRPGYVKDPRYQEVDSFTNLIPNRRFSGVRRDVFLNGSYND
YVREFHNMGPPPPWQGMPPYPGIEQPPHHPYYQHHAPPPQAHPPYSGHHPVPHEARYRDK
RVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDRGRDRERERER
ICDRDRDRGERGRYRR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacagccgggaggagaaagatggggaacttaatgttttggatgatattttg
actgaagtaccagaacaggatgatgaattgtataatccagagagtgaacaagataaaaat
gagaaaaaaggatcaaaaagaaaaagtgagagaatggagtctactgacaccaagcgacaa
aaaccttccatccattcaagacaattgatttctaagccactaagctcatctgtaagcaat
aataaaagaatagttagtacaaaaggaaagtcggttacagaatataaaaatgaggaatat
caaagatctgaaaggaacaagcgtctagatgctgatcgaaaaattcgtctgtcaagcagt
tcctctagagaaccttacaagagtcaaccagaaaaaacttgtctacggaaaagggattct
gaaagaagggccaagtctcctacaccagatggttctgagagaattgggcttgaagttgat
agacgtgcaagcagatccagccagtcttcaaaggaagaggtgaactctgaagactatggc
tctgaccacgagacaggaagcagtggttcttctgaacagggcaacaacactgagaatgag
gaggaaggaggggaggaagatgtagaggaagatgaagaggtagatgaagatgcagaagat
gatgaggaagtggatgaagatgcagaggaggaggaggaagaggatgaagaggaagaagag
gatgaggacgaggatgaagaggaagaagaatatgaacaggatgagagagatcagaaggaa
gaagggaatgattatgacacccgaagtgaggccagtgattctggttccgagtctgtttcc
ttcacagatggatctgtcagatctgggtcaggaacagatggatcagatgagaaaaagaag
gaaaggaagagagctcgaggcatatcacccattgtctttgatagaagtggcagttctgca
tcagagtcatatgcaggttcagaaaagaagcatgagaaattatcatcttccgttcgtgct
gtccgaaaagatcaaaccagtaaactcaaatatgtccttcaggatgcaagatttttcctc
ataaagagtaataaccatgagaatgtgtctcttgccaaagcaaagggtgtatggtccaca
ttgcctgtaaatgagaagaaattaaatcttgcatttagatctgcaaggagtgttatatta
atattttctgtcagagaaagtggaaaatttcaaggttttgccagattgtcttcagaatca
caccatggcggatctcctatacactgggtgcttccagcaggaatgagtgctaaaatgctt
ggaggtgtttttaaaatagactggatttgcaggcgtgaattaccctttactaaatcagct
catctcaccaatccctggaatgaacataagccagtaaagattggacgtgatggacaggaa
attgaacttgaatgtggaactcagctttgtcttctgtttccccctgatgaaagtattgac
ttgtatcagctcattcataaaatgcgtcacaagagaagaatgcattctcagcctcgatca
agaggacgtccatcccgtcgagaaccagtccgggatgtgggaaggcgtcgaccagaagat
tatgatattcataacagcagaaagaaaccaaggattgactatccccctgagtttcaccag
agaccagggtatgtaaaggatccccgataccaggaagtggacagttttacaaatcttatt
cccaacagacgattttcaggagttcgccgagatgtgtttttaaatgggtcctacaatgat
tatgtgagggaatttcataacatgggaccaccgcctccttggcaaggaatgcctccttac
ccgggaatagaacaacctccacaccatccttactaccagcaccatgccccacctcctcaa
gcccaccccccttactcaggacaccatccggtaccacatgaagcaagatacagagataaa
cgagtacatgactatgatatgagggtcgatgatttccttcgccgcacgcaagctgtggtc
agtggtcggagaagtagacctcgagaaagagatcgggagcgagagcgagaccgccccaga
gataacagaagagatagagagcgagacagaggtcgtgatcgagaaagagagagagaaaga
atatgtgatcgggacagagaccgaggggagagaggtcgttatcgaagataa
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integrated database retrieval system
