Mus musculus (house mouse): 233977
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Entry
233977 CDS
T01002
Symbol
Ppfia1, C030014K08Rik, LIP.1, LIP1
Name
(RefSeq) protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
KO
K26226
liprin-alpha
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmu04131
]
233977 (Ppfia1)
Membrane trafficking [BR:
mmu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
233977 (Ppfia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
233977
NCBI-ProteinID:
NP_001028491
MGI:
1924750
Ensembl:
ENSMUSG00000037519
UniProt:
B2RXW8
LinkDB
All DBs
Position
7:complement(144030492..144107497)
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AA seq
1241 aa
AA seq
DB search
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGLLDGNHEQESAPSTNGKRSSD
GSLSHEDLAKVLELQEVIDRQAREQSQMKERLASLSSHAAELEEDLDTARKDLIKSEEMN
TKLQREVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQTE
DKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEA
QLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLR
EVENAKKQLEETQHDKDQLVVTIEALKAELEQMRLRGPSLHHGRPHLGSVPDFRFSVADG
HVDAYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVS
DGEDDRDTLLSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIE
SRVGSGSLDNLGRFRSMSSIPPYPASSLAGSSPPGSGRSTPRRVPHSPAREVDRLGVMTL
PSDLRKHRRQLPASREEVRDDKTTIKCETSPPSSPRPLRLDRMHKGAPHTVSHEDIRDLR
NSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGPLGKESPGQVG
VSETENSSQDALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWV
GMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPP
TSRTTTGNVWLTHEEMETLTATPQTEDEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYR
SYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREES
QNETRDVLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPT
QNTQARAVLEREFNNLLITGTDRRFDEDDDKSFRRAPSWRKKFRPKDIRGLASGSAETLP
ANFRVTSSMSSPSMQPKKVQMDGSVSGAQRLDSATVRTYSC
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgaccattagtgaagcagaaggccctccaggaggaggtggg
agccatgggtcaggctccccttcacagccagatgctgattcgcattttgagcagctcatg
gtttccatgttggaagaacgggaccgccttctggacacactaagagagacacaagaaaca
ctggcattaacccaggggaagttgcatgaagttggtcatgaaagagattctttgcagagg
cagctcaatactgcacttccacaggagtttgctgcgctcacgaaggaactcaatgtgtgc
agggagcagcttctagagagagaggaagaaatcgccgagctgaaggcagagaggaacaac
actaggctgctgttggagcacctagagtgccttgtctccaggcatgagcgctctctccgg
atgacagtggtaaagaggcaggcacagtcacctgcaggcgtgtccagtgaggtggaagtg
ctgaaagccctgaagtcactgtttgaacaccacaaagccttggatgagaaggtacgagag
cgactacgagtggctctggagaggtgcagcttgttagaagaggagctgggtgccacccac
aaagagctaatgattcttaaagaacagaataatcagaagaaaacactaacagatggactg
cttgacggaaaccatgaacaggaaagtgcaccaagcaccaacggcaagagatcttctgat
ggctccttgagtcatgaggatcttgccaaagtgctggagctgcaggaagtcatagacagg
caggcgagagagcagagccagatgaaggagcgcctggcctccctgtccagtcatgcagca
gaactagaagaggatctggacacagctagaaaagacctcatcaagtctgaagagatgaat
acgaaactgcagcgagaagtccgtgaagcaatggcccagaaggaggatatggaagagaga
atcaccacccttgagaaacgctacctcgccgcacagcgtgaagccacgtctgtgcatgac
ctcaatgacaaacttgaaaatgaaattgcaaataaagactccatgcaccgacagacagaa
gacaagaaccgccagttgcaagagcgtctggagttggccgagcagaagctgcagcagacc
ctgcgcaaagctgagacgctgccagaggtggaggctgagctggcccagagggtggctgca
ctctccaaggctgaggagagacatggcaatattgaagagaggctgcggcagatggaggca
cagctggaggagaaaaatcaggagctgcagcgggcaaggcagagagaaaagatgaacgag
gaacataataagcgcctgtctgacactgtggataagttgctctcagaatccaatgagagg
ctgcagctgcatctgaaggagagaatggcggcgctggaggacaagaattctctactaagg
gaagttgaaaatgcaaagaagcaactagaagagacccagcatgataaggaccaacttgtc
gtgactattgaagccctgaaggctgagctggagcagatgagactgagaggtccttcactc
catcatggccgaccccatttgggcagcgtcccggacttcaggttctctgtggcagacgga
catgtggatgcttacagcaccagtgcagtgttgcggcgcccccagaagggccgactggca
gcgctgcgggatgagccctccaaggtgcagaccctcaatgagcaggactgggaacgggcc
caacaagccagcgtcttggcaaatgtggcacaggcatttgagagtgatgtcgatgtgtct
gatggtgaagatgaccgagatacactgctcagctcagttgatctgctgtcacccagtgga
caggctgatgcccagacactggccatgatgcttcaggaacagctggatgctatcaacaaa
gagatcaggctgatacaagaagagaaggagaatacagaacagcgggcagaggagatcgag
agcagagtgggcagtggaagcttggacaatcttggtcgttttagatcaatgagctccatt
cccccctaccctgcttcctcgcttgctggctcctctcctccaggcagtggtcggtccaca
ccaagaagggtccctcacagtcctgcccgggaggtggacaggctgggtgtcatgactctg
cctagtgacttaaggaagcaccggagacagttgccagcttccagagaagaggtacgagac
gacaagacgacgataaaatgtgaaacctctcccccctcctccccgaggcccctgcgctta
gacaggatgcacaagggcgcaccgcacacggtcagccatgaggacatcagggacctgagg
aactccacaggctcccaggatggtcccgtgagcaaccctagcagcagtaatagtagccag
gactccctccacaaagccccaaagaagaagggtatcaaatcctccattggccgcttgttt
gggaagaaggaaaagggccggcctggtccactgggcaaggagtcaccagggcaagttggt
gtttcagagacagaaaattcatctcaagatgccctgggactcagcaaactgggaggacaa
gctgagaaaaaccgtaaacttcagaaaaagcacgagctgctggaggaggcccgcaggcaa
ggcttgccttttgcacagtgggatgggcccacagtggtagtgtggttagagctctgggtt
gggatgcctgcctggtatgtggctgcttgccgagcaaatgtcaagagtggtgccatcatg
tcagccctgtcagacactgagatccagcgggagattggcatcagcaaccccctgcatagg
ctgaagctgcggctggccatccaagagataatgtcactgactagcccttctgctccaccc
acatccaggacgaccacaggaaatgtctggttgacacatgaagagatggaaacgcttaca
gccacgccacaaacggaagacgaggagggaagctgggctcagactctagcatatggggac
atgaaccacgagtggatcggcaatgagtggctgcccagcctgggcctgccgcagtaccgc
agctactttatggagtgccttgtagatgcccggatgctggaccacttgaccaagaaagac
ttgcgagggcagctgaagatggtcgacagcttccacagaaacagtttccagtgtggaatt
atgtgcctgagaaggctaaattatgaccgaaaagaactggaaagaaaaagagaagagagt
cagaatgagacaagagatgtgcttgtgtggagcaatgaccgggtgattcgctggatcctg
tcgattggccttaaagagtatgccaacaacctaatagagagcggtgttcacggtgcactt
ctggctttggacgagactttcgatttcagtgccctggcactcttgttacagattccaaca
cagaatacgcaggctcgagctgtcttggaaagagaattcaacaaccttttgatcacgggg
actgatcggaggtttgatgaggatgatgacaaaagcttcaggagggcgccttcctggagg
aagaagttcagaccaaaggacattcgtggcttggcctctggctctgcagagacgttgcct
gccaacttccgggtcacctcctcaatgtcatctccctctatgcagccaaagaaggttcag
atggacggtagtgtgtccggagcacagaggttggactctgccacagtcaggacttactcc
tgctag
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integrated database retrieval system
