Mus musculus (house mouse): 234594
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Entry
234594 CDS
T01002
Symbol
Cnot1, 6030411K04Rik, D830048B13
Name
(RefSeq) CCR4-NOT transcription complex, subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
234594 (Cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
234594 (Cnot1)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
234594 (Cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
234594 (Cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
234594
NCBI-ProteinID:
NP_835179
MGI:
2442402
Ensembl:
ENSMUSG00000036550
UniProt:
Q6ZQ08
LinkDB
All DBs
Position
8:complement(96445559..96534741)
Genome browser
AA seq
2371 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSPDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSEGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDFIYRPWKHAEGQLSFIQHSLINPEVFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPAETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQTDLSQVWPEANQHFSKEID
DEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFPQY
PDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRL
KDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQAQAQ
VPAKAPLAGQVNTMVTTSTTTTVAKTVTVTKPTGVSFKKDVPPSINTTNIDTLLVATDQT
ERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNF
HSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLA
KNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVFRPPNPWTMAIMNV
LAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKDVKQ
PEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTIPLFQA
HPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAAHHMM
RNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNCELACC
FIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVD
PKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELEQHLHA
IPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADLLLRYR
ECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDLH
LAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRGNAPEG
LPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHS
AAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANP
TMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEF
QQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHR
IFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHD
FPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRIL
TNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVLYVGTQ
AIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFS
CTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHC
APEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcacatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagacacagtttctgattcaggagtgtgcctcg
ctgattacaaagccaaattttatctcaacattgtcatatgccattgataatccattgcac
taccagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ctaagtaaagtacaggaggtcatttttggtcttgcccttttgaattcttctagcccagat
ctcaggggttttgctgcccagtttattaaacagaagcttccggatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctactctcccatctcctctttgggcagaagggagcctttggagttggacag
gaacagatagacgcctttcttaagacactacgcagagattttccccaagagcgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggattttg
cctgattctggaggggtagctaaaaccatgatggagagctcgctagctgacttcatgcag
gaagtgggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgccagggttttgggaatgatggctcggact
cattcaggattaacagacggtattccattacagagcatctctgctcctggcagtgggatc
tggagcgacggaaaagataaaagcgagggggcacaggcacacacgtggaatgtcgaggtt
ttgattgatgttcttaaagagctgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcagattcgtgacagcaaaggacttcacaatgtggtttatggc
attcaaaggggtctgggcatggaagtgtttccagtagattttatatataggccttggaaa
catgcagaaggccagctctccttcatccagcattccctgataaacccagaggtcttctgt
tttgctgactacccctgtcacactgttgccactgatattttgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaaaagcttggatttgattgaatctctgctgaggctt
gcagaggttgggcagtatgagcaagtgaaacaactcttcagcttccctatcaaacactgt
ccagacatgttggtattggccttacttcaaatcaacacttcctggcacaccctacgccat
gaactcatctctactttgatgccaattttccttggaaaccatcctaactctgccattatt
ttgcactatgcatggcatgggcaggggcagtctccatcaattcgccaacttataatgcat
gcaatggcagaatggtacatgagaggggagcagtatgatcaggccaaattgtctcgaata
cttgacgtggcccaggacttgaaggccctgtcgatgctgctgaacggcactccatttgct
tttgtcattgaccttgctgcactcgcttcacggcgggaatacctcaaacttgacaagtgg
ctaacagataagataagagagcatggggagccttttatacaagcatgtatgactttttta
aagagaaggtgcccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcccgctgaaactctggcaacaatgttggcttgtctgcaggcttgtgcaggg
agtgtttctcaagagttatcagagaccatcctcaccatggtagccaattgcagtaatgta
atgaataaggccagacagccaccacctggagttatgccaaaaggtcgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcggctgcccctcacacccagagcatgcagggttttcctccaaatctg
ggttctgcgttcagtacccctcagtcaccagcaaaagcatttccaccactttcaacccca
aatcaaacaacggccttcagtgggattggaggactctcctcacagcttccagtaggtggt
cttggcacaggaagcctgactggcataggaactggggcccttggacttcctgcagtgaac
aatgatccttttgtacagaggaaactgggcacctctggactcaaccagcctacattccag
cagaccgacttgtctcaggtgtggccagaggcaaatcagcactttagtaaagaaattgat
gatgaagcaaacagttatttccagcgaatatataatcacccaccacatccaaccatgtct
gttgatgaggtattagaaatgctacagagatttaaagactctacaataaaaagggaacga
gaagtatttaactgtatgctgaggaacttgtttgaagaataccggtttttccctcagtac
cctgataaagaattacatataacagcttgcttgtttggtggcataattgaaaaaggactg
gtcacttacatggcattgggtctggccctgcgatatgttcttgaagccttacggaagcct
tttggatccaaaatgtattattttggtattgctgcactagatagatttaaaaatagattg
aaggactatcctcagtattgtcagcacctggcttctatcagccactttatgcagttccca
catcatttgcaggagtacattgagtacggacagcagtctcgagatcctcctgtgaaaatg
cagggctctattactacccctggaagtattgcactggctcaggcccaggctcaggcccag
gttccagcaaaagctcctcttgccggtcaggttaacacaatggtaaccacctcaacaacc
accactgttgctaaaacggttacagtcaccaagccaacgggagtcagctttaagaaagat
gtgccaccttctataaatacaacaaatatcgatacattgcttgtggccacagatcaaact
gagaggattgtggagcccccagaaaatattcaagagaaaattgcttttattttcaacaat
ctctcccagtcaaatatgacacagaaggttgaagagcttaaagaaactgtgaaggaagaa
tttatgccttgggtttcccagtatctggttatgaaaagagtcagtattgagccaaacttt
catagcctgtattcaaactttcttgatacattgaagaatcctgaatttaacaagatggtt
ctgaatgaaacctacagaaacattaaagtgctgctgacttctgataaagctgcggccaat
ttctcagatcgttctttgctgaagaacttgggacattggttaggaatgatcacattagct
aaaaataaacccatcttacacacagacttggatgtgaaatctttgctgttagaggcttac
gttaaaggacagcaagagttgctctatgtggtgccctttgttgccaaagttctagagtcc
agcattcgcagcctggtttttagaccaccaaacccctggacaatggcaattatgaatgta
ttggctgagctgcatcaggagcatgacttaaagttaaacctgaagtttgagattgaggtg
ctctgtaagaaccttgcattagacatcaatgagctcaaacctggaaacctgctgaaagat
aaagatcgtctgaagaacttagatgagcaactctctgctccaaagaaagatgtcaagcag
cccgaagagcttcctgccatcacaacaacaacaacttctacaacaccagctaccagtact
acgtgtacagccacagttccaccacagccacagtacagctaccacgacatcaatgtctac
tctctagcaggcctggcacctcatattactctaaaccctacaatccctttatttcaagct
catcctcagctgaagcagtgtgtgcggcaagcaattgaaagagctgtccaggagcttgtc
catcctgtggtggatcgctcaattaagattgctatgactacgtgcgaacagatagtcaga
aaggactttgccctggattctgaggagtctcgaatgagaatagcagctcatcacatgatg
cggaacttgacagctggaatggctatgattacttgcagggaacctttactgatgagcata
tccaccaacctcaaaaacagctttgcctcagccctgcgtactgcatccccacagcaaagg
gaaatgatggaccaggctgctgctcagttagctcaggacaattgtgaattagcttgttgt
tttattcagaaaactgcagtggagaaagcaggccctgagatggacaagagattggcaact
gaatttgagctgaggaagcatgcccggcaagaaggacgtaggtactgtgatcctgtggtc
ttaacctaccaagccgagcggatgccggagcagatcaggctgaaagttggtggtgtggac
ccaaagcagctagccgtctatgaagagtttgcacgaaatgtgcctggcttcttacctaca
aatgacttaagtcagcctacagggtttttagctcagcccatgaagcaagcttgggcaact
gatgatgtagcgcagatttatgataagtgtattacagaactggagcagcacctacacgcc
attccacccactctggccatgaatcctcaagcccaggctctccgaagtcttttagaggtt
gtagtgttgtctcggaattctcgggatgcgatagctgctcttggattactacagaaggct
gtagaaggcttattagatgccacaagtggtgctgacgccgacttactgctgcgatacagg
gagtgccacctgttggtactgaaagctctgcaggatggcagggcatatggatctccatgg
tgcaacaaacaaatcacaaggtgcctaattgaatgtcgagatgaatataaatataatgtg
gaggctgtggaattgttaattcgaaatcatttggttaacatgcagcagtatgatcttcat
cttgctcagtcgatggagaatggcttgaactatatggccgtggcgtttgctatgcaactg
gtaaaaattctgctggtggatgaaaggagtgttgcccatattactgaggcagatctgttc
cataccattgaaaccctcatgagaattaatgctcattccagaggcaatgctccagaaggg
ttgccccagctgatggaagtggtgagatccaactatgaagcaatgattgatcgtgctcat
ggaggccctaactttatgatgcattctgggatctctcaagcctcagaatatgatgaccct
ccaggcctgagggagaaggcagagtatcttctgagggaatgggtgaatctctaccattca
gcagcagctggccgcgacagtaccaaagcattctctgcgtttgttggacagatgcaccaa
caaggaatacttaaaactgatgacctcataacaaggttttttcgtctttgcactgaaatg
tgtgttgaaatcagttaccgtgctcaggcggagcagcagcacaatcctgcggctaaccct
accatgatccgggccaagtgctaccacaacctggatgcctttgtccgcctcattgcactg
ttagtgaagcactctggggaggccaccaacactgtcacaaagatcaacctgctcaataag
gttctcggtatagtagtgggagttctcctacaggatcatgatgttcggcagagtgaattt
cagcaacttccgtaccataggatttttatcatgctgctgttggagctcaatgcacccgag
catgtgttggaaaccattaatttccagactcttactgctttctgcaatacattccacatc
ttgagacctactaaagctcctggctttgtatatgcttggctcgaattgatttcccatcgg
atctttattgcaagaatgctggcacatacgccacagcagaaggggtggcctatgtatgct
cagctgttgattgatttattcaaatatttagcacctttccttagaaatgtggaactcact
aaacctatgcaaatcctctacaagggtactctgagagtgctgctggttcttttgcatgat
ttcccagagttcctttgtgattaccattatgggttctgtgatgtgatccctcctaattgt
atccagttaagaaatttgatcctgagtgccttcccaagaaacatgaggctcccagaccca
ttcactcctaatctgaaggtggacatgttaagcgaaattaacatcgcacctcggatcctc
accaatttcactggagtgatgccgcctcagttcaaaaaggatttggattcttatcttaaa
actcggtcgccggtcactttcctgtctgatctgcgtagtaacctacaggtatctaatgag
cccgggaatcgctacaacctccagcttatcaatgcattggtgctctacgtagggactcag
gctatcgcacacatccacaacaagggcagcacgccctcaatgagcaccatcacccactca
gcacacatggacatcttccagaacctggctgtggacctagacactgagggccgatatctc
ttcttaaatgcaattgcgaaccagctacggtacccaaacagccacactcactacttcagc
tgcacaatgttgtacctttttgctgaggcgaacactgaggcaatccaggaacagatcaca
agggttctcttggaacggttgattgtaaataggccacatccttggggtcttcttatcacc
ttcattgagctgattaaaaacccagcatttaagttctggaaccatgaatttgtacactgt
gccccagagattgaaaagttatttcagtctgttgcacagtgctgcatgggacagaagcag
gctcagcaagtgatggaggggaccggtgccagttag
DBGET
integrated database retrieval system
