Mus musculus (house mouse): 235559
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Entry
235559 CDS
T01002
Symbol
Topbp1, 1110031N14Rik, 2810429C13Rik, D430026L04Rik, mKIAA0259
Name
(RefSeq) topoisomerase (DNA) II binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
235559 (Topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmu03032
]
235559 (Topbp1)
03400 DNA repair and recombination proteins [BR:
mmu03400
]
235559 (Topbp1)
DNA replication proteins [BR:
mmu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
235559 (Topbp1)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
235559 (Topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
235559
NCBI-ProteinID:
NP_795953
MGI:
1920018
Ensembl:
ENSMUSG00000032555
UniProt:
Q6ZQF0
Structure
PDB
LinkDB
All DBs
Position
9:103182351..103227627
Genome browser
AA seq
1515 aa
AA seq
DB search
MSRNDQEPFLVKFLKSSDNSECFFKALESIKELQSEDYLQIITDEEALKIRENDKSLYIC
DRFSGTVFDHLKQLGCRIVGPQVVTFCMRHQQCVPRAEHPVYNMIMSDVTVSCTSLDKDK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKITKYTDVNMEDFKCPIFLGCIICVTGLNGIHRKTVQQLTAKHGGQYMGQLKMNECTH
LIVQEPKGQKYECARRWNVHCVTLQWFHDSIEKGFCQDESIYKAETRVEAKMVPDTSTPT
AQSNAESHTLADVSHISNINGSCVNETMFGSTTSKLECSLENLENLDISMFQAPEDLLDG
CRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDDVRQFWSKSSHRPHV
VGAKWLLECFTKGYILPEESYIHTNYQPAGIAVSDQPGNQTAVLDKSGSFSKSALVPAER
LQQADEDLLAQYGNDDSTMVEAKLSEALEPEVGPCPGSAHREPCDDSTHISVQEENKSSV
SHCILDDSTVREEGLFSQKSFLVLGFSVENKCNIVDIIREHAGKIVSLPSRIVADYAVVP
LLGCEVDVTVGEVVTNTWLVTCIDNQTLVDPKSNPLFTPVSVMSGVTPLEDCVISFSQCV
GAERDSLVFLANHLGASVQEFFVRKANAKKGMLASTHLIVKEPTGSKYEAAKKWSLPAVN
ISWLLETARIGKRADENHFLVDNAPKQEQVLETKIPNGVSSNPDLPAHPDAHLEIHRKKA
VTPLDMNRFQSRAFRAVISQQRGQDPTFPPVRQPLTKEPSLHLDTPSKFLSKDKLFKPSF
DVTDALAALETPNAASQKRKLSSPLSEVIVRNLTVALANSSRNTDSHSASPQLKGAHLEE
EETRKPLDSVVVCVSKKLSKKQSELNGVAASLGAEYRWSFDETVTHFIYQGRANDSNREY
KSAKERGVHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDINTVQDGRLCNSRAPLAV
SASKDDGPDHLSVEGNETNTMGTNDKESPLLNGSGRDDCKGALTQALEMRENFQKQLQEI
MSATCIVKTPAQKTCMSRSSCNSASSTPDSARSVRSGRSRVLEALRQSRQAVPDVNTEPS
QNEQIIWDDPTAREERARLASNLQWPSDPTQHSELQVEIKMPDDSPSRKPVYHSEIAEQA
SCVTQAPGHPGSEEPEPPVAERPLIPEPQAPAVASPLAKPPVAPQPADKIETQEETHRKV
KKQYVFQMSSLNSQERIDYCRLIKDLGGSVIEKQCSDPSCTHMVVGYPLRNEKYLASMAA
GKWVLHRSYLDACKTAGRFVQEEDYEWGSSSILDALPDVTEHQQKLALAAMRWRKRIQQS
QESGIVEGAFSGWKAILRVDRPREAGFKRLLQAGGAKVLSGHPEPLLKDATHLFCDFNKL
KPDDCRVFIAEATAQNMVCLKTEYIADYLMLESPPCADNYRVSEAALFHNKKGGPGLPQK
RKTPAENVVKRPRVH
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgaccaagagccgtttcttgtgaagtttttaaagtcttcggacaattca
gaatgcttttttaaagctcttgagtcaataaaggaattacaatcagaagattatcttcag
attattacagatgaggaagcattgaagataagagagaatgacaaatcgctttatatctgt
gaccgtttcagtggcactgtttttgatcaccttaaacagcttggctgcaggattgttggt
cctcaagtggtcacattttgtatgcgccaccagcaatgtgtcccaagagctgagcatcca
gtctacaacatgataatgtctgacgtaactgtatcctgtacaagcctggataaagacaaa
cgggaagaagttcataaatacgtacaaatgatgggtggacgagtatacagagaccttaat
gtatcagtcactcaccttattgcaggagaagttgggagcaaaaagtacttagttgctgct
aatctgaagaagcctattttgctaccttcttggataaaaaccctttgggagaagtcacaa
gaaaaaaaaataaccaagtacactgatgtaaacatggaagactttaagtgtcctattttt
cttggttgcattatctgtgtgactggcttaaatggaatacacagaaagacagtccagcaa
ctcacggctaagcacggaggccagtacatgggacagttgaagatgaatgagtgtacacac
ctcattgtgcaagaaccaaaaggacaaaaatacgaatgtgccaggagatggaatgtgcac
tgtgtgaccctgcaatggtttcatgacagtattgagaaaggcttttgtcaggatgaatct
atatacaaggctgaaaccagagtagaagcaaagatggtgcctgatacttcaacacccact
gctcagagcaatgctgaaagtcacacgctcgcagatgtcagccatatatccaacataaat
ggcagctgtgtaaatgaaacaatgtttggttcaactactagcaaacttgaatgttccctt
gaaaacctagaaaatctggacatcagtatgtttcaagctcctgaagacttattagatggc
tgtcggatatatctttgtggttttagtggcagaaagctggataagctgagaaggcttatt
aacagtggaggtggagttcgatttaatcaactaaatgaagatgtaactcatgtaattgtg
ggagattatgatgacgacgtgaggcagttctggagcaaatcatctcacaggcctcacgta
gtgggagcaaagtggttgctggagtgttttactaaaggatatatacttcctgaagagtcc
tatatccacactaactaccagccagctggaattgcagtttccgatcagcctggaaaccag
acagctgtcttagacaagagcggctcattctccaagagcgcccttgttcctgctgagagg
cttcagcaggccgacgaggatctgcttgctcagtatggaaatgacgactccacgatggtt
gaagctaagctatctgaagctttagagcctgaagtcgggccttgccctggttctgctcac
cgtgagccctgtgatgattccactcacatttctgtgcaagaggaaaacaagtcgtctgtc
agtcattgcatccttgatgactctacagttcgtgaagaaggcttatttagccagaagagt
ttccttgttttgggttttagtgttgaaaataaatgtaatattgtagacatcataagagag
catgctggcaagattgtgtcccttcccagcagaattgttgctgactatgctgtggttcca
ctgctgggatgtgaggtagacgtgacggtgggagaagttgttacaaacacgtggctggtt
acgtgtatagacaaccagacattagttgatcccaagtcgaatcccctcttcacaccagtc
tcagtaatgtcgggagtgactcctttagaggactgtgtgatttccttcagtcagtgtgtg
ggagcagaaagagattccttggtattcttagcaaatcaccttggagcaagtgttcaagaa
ttctttgttcgcaaagccaatgcaaagaaaggcatgctcgccagcacacatcttatagtg
aaggaaccgactggttccaaatacgaagctgcaaagaaatggagtttgccggcagttaac
atttcatggctcttagaaactgcgagaatcgggaagagagcagatgaaaaccattttctg
gttgacaacgcacctaaacaagaacaagttttagaaactaagataccaaatggagtgagt
tcaaatccagatttaccagcacatcctgacgcacacttggaaattcacagaaaaaaggcg
gttacacctttggacatgaatcgctttcagagtagagccttccgtgctgtcatttcacag
cagagggggcaggaccccacctttccaccagtacggcagccccttactaaggagccctct
ttacacctggacacaccatcaaagtttctgtccaaggacaagcttttcaagccatccttt
gatgtgacggatgcacttgcagccctggaaaccccaaatgctgccagccagaagcggaaa
ctaagctcaccactctctgaagtcatcgtcagaaacctgacagttgctttggcaaatagt
tcccgaaacactgacagtcattctgccagccctcagctgaagggtgcccatttggaggag
gaagagactcggaaaccacttgacagcgttgtggtgtgtgtgagtaagaagctcagtaag
aagcagagtgagctcaatggggtcgcagcatcactgggagcagagtacaggtggagtttc
gatgagactgttactcatttcatttaccagggtcgggcaaatgacagtaatcgagaatat
aaatctgcaaaggaaagaggggtgcacatcgtgtccgagcattggctattagagtgtgct
caagagtataagcatcttcctgaatctctttatccacacacttacaatcccaaaatgagt
ttggacatcaacacagtgcaagatgggcggctctgtaacagccgggcacccttggcagtt
tctgcatctaaggatgatgggccagatcatctgtctgtagaaggaaatgagacaaacact
atgggcacaaatgacaaagagtcacctctgttgaatgggagtggaagagatgactgtaaa
ggagctctgacccaggccttggagatgagagagaacttccagaagcagctgcaagagatc
atgtcagccacctgcattgtgaagacgcctgcccagaagacttgcatgtcaagaagcagc
tgtaacagcgcctcttcaactcctgacagcgctcgctctgtgcggagcggacgaagccga
gtcctggaggcactcaggcagtctcggcaggcagtgcctgatgtgaacacggagccgtcc
cagaacgagcagatcatttgggacgacccgacagcaagggaagagagagcaaggcttgcc
agcaacttacagtggcccagcgaccccacacagcattctgagcttcaggttgagataaaa
atgccggatgactctccctctcgaaagcctgtgtaccattcagaaattgctgagcaggcc
tcgtgtgttactcaagccccagggcacccaggctctgaagaaccagagcctccagtagca
gaaaggcctttgatccccgagccgcaagcccccgctgtagcttcccccctggctaagccg
cctgtggccccacaacctgcagacaagattgaaacacaggaggagacgcacagaaaagtt
aaaaaacagtatgtgttccagatgtcgtctctgaattctcaagagcggattgattactgt
cgcctgattaaagacttaggtgggtcggtgatcgagaagcagtgctctgaccccagctgc
acacacatggttgtgggctacccactgcgcaatgagaagtacttagcttctatggcagct
ggtaaatgggtgcttcatcgctcctacctagacgcttgcaagacagctgggcgctttgtg
caggaagaagactacgagtggggaagtagctccatacttgatgctctccctgacgtcact
gagcaccagcagaagctcgcactggcggcaatgagatggaggaaaagaatccagcaaagt
caagaatccggcattgttgagggagcatttagtggctggaaagctattttacgtgttgat
cggccccgagaagctgggttcaaacgccttcttcaggcaggaggagcaaaggtgttatct
ggtcatccagaacctttacttaaagatgctacgcatctcttttgtgacttcaataaactg
aaacctgatgactgcagagttttcatcgcagaggctactgcccagaacatggtctgcttg
aaaacagaatatatcgctgattatctcatgctggaatcccctccttgtgcagacaattac
cgtgtatccgaagctgctttattccataataagaaaggtgggcctggattaccacagaag
aggaaaactcctgcagagaatgtagtcaaacggcctcgagtacactga
DBGET
integrated database retrieval system
