Mus musculus (house mouse): 236266
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Entry
236266 CDS
T01002
Symbol
Alms1, bbb
Name
(RefSeq) ALMS1, centrosome and basal body associated
KO
K16741
alstrom syndrome protein 1
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
236266 (Alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmu03037
]
236266 (Alms1)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
236266 (Alms1)
Cilium and associated proteins [BR:
mmu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
236266 (Alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_repeat
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
236266
NCBI-ProteinID:
NP_660258
MGI:
1934606
Ensembl:
ENSMUSG00000063810
UniProt:
Q8K4E0
LinkDB
All DBs
Position
6:85564482..85698973
Genome browser
AA seq
3251 aa
AA seq
DB search
MEPEDLPWPDELEEEEEEEEEEGEEEEGKKEVENASAAATEEALTSEESGRLEEFEEAGP
DLDFNYESQRQESSDEEEDELAKAWLQAHPDRPGSAFSLPPPTPPPPPPPLSPRLRYTPV
EHLGKTEVVPLTCRVWQQSSYQDNSRAQFSNSSTMLLETGVRWGSEEDQRTESWHCLPQE
RDSSQTLAMSQTEIGRVEGTEVPDLPSQEGGLPAQSQCPGKKPKLNVLCSPLLVIQDNFA
APDLPLLTCLIQDQEEVEPDSLFQQSELEFAPLRGIPDKSEDSEWLARPSEVSEALIQAT
SETSSDLANSCFSISQHPLTEGLQGKAESGVLTRCGDAKYSSLYENLGAQSERIAVLQRE
VGCSNLGISQASPSSLPSFVPQEPTSEPEYHSSNLRMLRVSPDTLLTTHTHSAGSADQKI
GAAVVSSAYSQEIKPGSFHQEELPDRHLNEEIRKVSPALRTAGQKPEMLPVQSSSYSKGM
KSIFYQHPVSHGHQGKEPLSVSAVCGSAGNKAFHQLSTLSDSLLTEETWPVSVIPGLGNQ
KTPLPSEFSLSYSHRGKNLPEDVVKVSTDSGSAHKKADILTASSRTYQHKMKPANIYHQE
LPDSRVPIGTRKVAFESGPAGQKSGVSHPYGEMPSVFYQQGLPDRHSAKSPTKTFIPGPA
DQKTDLSPVPPTSSSHAEKPVSPYQLTLPGSHLPEDVFKASSVCKSSDELSGITALTSAS
YSYKGRPNSSYQQKFPDSHLNEEAQKILGTTGTVDQKTVTPTMSSSFLQKEKPSIFYQQT
LPDGGLSEEDLQVSAVPWPADQNIAIPTVTSAAFSQREKPRIFYQQTLSVDRLPGEPLNV
LGTSGPPDQNTGAPTVTPSSYFPGEESIIFYQAGFPGNTLSAMSFKVPRISGSTEQTNVT
TGSSSSYSVGEKSIIFYHQALPDGRLPQEASPAPADLNTGEPPMYLASCSVGVKPIIFYQ
QPMSDSQRTKGHKESDVPGPTDQKTGIATVHSTSQSYIGRRTVSYQKEFPDLSEKALKVL
GDVGSTEQKTQIPVVSSALLHKEGPSAYQEDLPDLTEEPLQILGVSEEVSSSSYQRKLPD
HIEVFLKSVGSGSADRKTGAQIVSSSREKSSGFHQQELPNTGGDAVDAFHPEPVVQEVRK
VQTPGAPAGPSSSHFHKEKLSDYQKASPHRDLTESSLKASTVPGLSDQKKKPAVSSGFCL
HKEKHEISASALLNCQTAELLTVTQRSCLHREDPAISTVIKPDDQKIPLPTTFHGSSDQK
VKPVIFVQKQLRDRDQSEDIPKISTVSEPTVVNTVLPVLLPGSYSHREKSDSFYPQELPD
GHLTEVDLKVSSGLGQADQISGLPTGIPGTYSHSEKHQLISEHVQELMDNLNSSESSCLS
VDSMPLNSQIDDGVIICKPESLGFANAGCEEMQNIDRGSKTLKEIQTLLMEAENMALKRC
NFSVPLVPFRDVNDVSFIRSKKVVCFKESSTTDVCTQRESFVEEVPHIEYVQKDIGTQTN
LKYQRGVGNWEFISSATFRSPLQEAEGTARMAYDETFRQYKAARSVMRSEPEGCSTGIGN
KMIIPMMTIIKSDSSSDVSDGCCSWDNNLPESLESVSDVFLNFFPYTSPKTSITDSREEE
WLSESEDGYGSTDSLAAHVKYLLQCETSLNQAKQILKNAEEEEYRVRTQAWNLKFNLGRD
RGYSISELNEDDRRKVEEIKAKLFGHGRATHMSEGLRSPQGIGCLPEAVCSRIIIESHEK
GCFRTLTAEQPRPDSCHCAFRSVEPSDLIRGHRSPSSWRGRHINLSRSIEQSNPCFKVGS
SFQLQSHPPFQKLLPDDIKISKGVGMPVHAYMDPQPSELVEPTCVPAKEMDFPSSSQILP
PEPKKQFTTAITFSSHEHSECISDSSGCKVGVTADSQCSGPSLGVFKPHIPEEQISPRDL
KQKTSFQSSLERHGSTPVTILADGSRQRQKLPVDFEHSHQKEKLLQRLGFKVSHSEPNVS
TNVSNFKGVQFSGKDTIVSQDKLTSTVEVKEKNVTVTPDLPSCIFLEQPELFEESHTPHT
DLQMRKYPSPSCPEIASRIFLEQPKLSEQSKAPHVDREIREDHSFFPKCQDYIVADPSPD
FPDQQQCKPPDVVGHTRKQNSLLSEGQDYELEEVQHIPQSYFSNMVNVEAKVSDAISQSA
PDHCTAASTPPSNRKALSCVRITLCPKTSSKLDSGTLGERFHSLDPASKTRINSEFNSDL
RIISSRSLEPTSKLLTCKPVAQDQESLVFLGPKSPLDLQVAQSSLPDSKTIFQDLKTKPP
QNSQIVTSRQTQVNISHLEGYSKPEGTPVSADGSQEQSKVSFTTSFGKLSSDAITQITTE
SPEKTTFSSEIFIHADDRGQGILDPMAQKPSRFASSSSVQQIPASHGKDAQPVLLPYKPS
GSSKMYYVPLLKRVPSYLDSKSDTTVESSHSGSNDAIAPDFPPQMLGTRDDDLSNTVNIK
HKEGIYSKRAATKGKNPSQKGDAAAPVQMPITWDENVLDENQEEVISRGVVIKMAGPEEM
SSLEKDLAGPSDITVQDRKTENLPDTKSIKQKEGSLEIESECHSAFENTAHSVFRSAKFY
FHHPVHLPHEQDFCHESLGRSVFMQHSWKDFFHHHSGHSCLPPPGPSSDKLDKTKMDYTR
IKSLSINLNLGEHEKIHTIKNQARDPKGKRQANEQKKDQKVTPELTTECPVSLNELWNRY
QERQKQQNPSGACDTKELSLVERLDRLAKLLQNPITHSLRASESAQDDSRGGHRAREWTG
RRQQKQKGKQHRKWSKSLERGQSTGDFRKSKVFSPHQGGKSSQFKIEQIKLDKYILRKEP
GFNNVSNTSLDSRPSEESVSLTDSPNIFSSTDSPVDSDVLTPTDRDMPLNERSSSISTID
TVRLIQAFGQDRLSLSPRRIKLYSTVTSQRRRYLEQPCKHNRKALNTACPQMTSEHSRRR
HIQVANHMTSSDSVSSPGSLLSLDSALSNEETVRMVSKGVQAGNLEIVAGVKKYTQDVGV
TFPTPSSSEARLEEDSDVTSSSEEKAKEKKFLSNYLQTKNLRKNKPNPCAGVSWFVPVES
GQSGSKKENLPKIYRPVISWFEPVTKTKPWREPLREQNWQAQCMNSRGSLGGPGRDSGQV
SLRPFVRATLQESLQLHRPDFISHSGERIKRLKLLVQERKLQSLFQSEREALFHSARPLP
RRVLLAVQKNKPIGKKEMIQRTRRIYEQLPEVKKKREEEKRKSEYKSYWLRAQHYKMKVT
NHLLGRKVPWD
NT seq
9756 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgaggacctgccgtggcctgacgagctggaggaggaggaggaagaagaggag
gaggagggcgaggaagaggaggggaagaaagaggtggagaacgcctcggcggcggcgacc
gaggaggccctgacctctgaggagagtgggagactggaagagttcgaagaggcggggccc
gacttggattttaactacgagtcccagcggcaggagagctcggacgaagaggaggacgag
ctggctaaagcctggctgcaggctcaccccgaccgtcctggcagtgctttctctctgccc
cctcccacgcctccgcctccgcctccgcctctgtccccgcggctccggtacaccccagtg
gagcatctgggcaagactgaggttgtcccactgacttgccgtgtatggcagcagtcatca
tatcaagataattctagagcccagttttccaactccagtacaatgttattggaaacaggg
gtccggtggggctctgaggaggatcagagaacagagtcttggcattgtcttcctcaagaa
agggattcttcccaaaccttggctatgtcccagactgagatcggcagagtagaaggaaca
gaagtaccagacctaccctctcaggagggaggtttaccagctcagtcacagtgtccagga
aagaagccaaagctgaatgtcttgtgttctccattgctagtgatacaggataactttgct
gctcctgatttgcctttgctgacatgtttgatacaagaccaagaagaggttgagcctgat
tccttgtttcaacaaagtgaactagaatttgcacctttgagaggaattcctgataagtct
gaagattctgaatggcttgctcgaccatcagaagttagtgaagctttaatccaagccacc
tcagaaacatcttcagacttagctaacagttgctttagtatatctcagcatccacttaca
gagggcctgcaggggaaggctgaatctggtgtccttactaggtgtggtgatgctaagtac
tccagcctttatgaaaaccttggtgcacagagtgaaagaattgctgtattgcagagagag
gtaggttgttctaatctgggcattagccaggcttctccatcttcattgccttcatttgtt
cctcaagaaccaaccagtgagccggaataccattcctccaatctcagaatgttgagggta
tctcccgacactctgctaacaacgcatacacattcagcaggatctgctgaccagaagatt
ggagcagcagtagtctcttctgcttactcacaggaaataaagcctgggagttttcaccaa
gaagagttgccagataggcatcttaatgaagagattcggaaagtgtcacctgctcttagg
acagctggccagaagccagagatgctaccagtacaatctagttcttactctaaaggaatg
aaatctattttctatcaacatcctgtgtcacatggccatcaaggcaaagagcctctaagt
gtttcagctgtttgtggatcagctggtaataaagctttccaccagctttccacattatca
gacagtctactaactgaagaaacatggccagtttctgttattcctggcctaggtaaccag
aagactcctttaccatcagaattctctctttcatattctcatagaggaaagaacctgccc
gaagatgttgtgaaagtttccactgattctggatctgctcacaagaaggctgacattcta
acagcgtcctctagaacctaccagcacaaaatgaaacctgctaatatttaccaccaagag
ttgccagacagtcgtgtacctatagggactagaaaggttgcatttgaatctggaccagct
ggccagaagtctggggtttctcacccatatggtgagatgcccagtgttttctatcagcag
gggttgccagataggcattcagcaaaaagccctacaaaaacctttatcccaggaccagct
gaccagaagactgatctatcaccagtaccccctacttcctcttcgcatgcagagaagcct
gtttccccctaccagttaaccttgccaggtagtcatctacctgaagatgttttcaaagct
tcttctgtttgtaagtcatctgatgagctatctggaataacagctctaacctctgcttcc
tactcatataaagggagacccaatagttcttatcagcagaagtttccagacagccaccta
aatgaagaggcccagaaaatcttgggtacaactggaacagtagaccagaagacagtgaca
ccaacaatgtcttcttcctttttacaaaaagaaaagcctagtattttctaccaacaaacc
ctgccagatggtggtctgtctgaagaggatctgcaggtttcagctgttccttggccagct
gaccagaacattgctataccaacagtaacttctgctgctttctcacaaagagaaaagcct
cggattttctaccaacagactctgtcagttgatcgtttgcctggagagcctctgaatgtt
ttagggacttctggaccacctgaccagaacactggggcaccaacagtaactcctagttcc
tacttccctggagaagagtccattattttttaccaagctggctttccaggtaacactctg
tctgcaatgtcttttaaagttccaaggatttctggatcaactgaacagactaacgtaaca
acaggatcatcaagttcctactcagttggagagaagtccattattttctaccatcaggcc
ttgccagatggtcgtcttcctcaagaagcttctcctgcaccagctgacctaaacactggg
gagccaccaatgtatttggcttcctgttctgttggagtaaagcccattattttctaccag
cagcctatgtcagatagtcagcgaactaaaggtcacaaagaatcagatgttcctggacca
actgaccagaagactggcatagcaacagtgcattctacttcccaatcatatatagggagg
cgcactgtttcttaccagaaagagtttccagatcttagtgaaaaggctttgaaagttcta
ggtgatgttggatccactgaacagaaaactcaaataccagtagtgtcttctgctctctta
cacaaagaggggcctagtgcttaccaggaggatttgccagatcttactgaagaacctttg
caaattttaggtgtttctgaagaagtttcttctagctcttatcagaggaagttaccagat
catattgaagtatttttgaaatcagtaggctctggctctgctgatcggaagactggggca
caaatagtctcctcaagtagagagaagtccagtggttttcatcagcaggagttgccaaat
actggtggggatgcagtagatgcttttcatcccgaaccagttgtccaggaggtcaggaag
gtacagacgcctggggcaccagcaggaccttctagttcccacttccataaagaaaaactc
agtgattatcaaaaggcctcgccacatcgtgatctaactgaaagttctttgaaggcttca
actgttccaggactatctgatcagaaaaagaaacctgcagtctcatctggtttctgctta
cacaaagagaaacacgagatttcagcttcagctttgctgaattgccagacagccgagttg
ctaacagttactcagaggtcctgtttacatagagaggatcctgcaatttcaactgtgatc
aaaccagatgaccaaaagattccattaccaacaacttttcatggctccagtgatcaaaaa
gtaaaacctgttatttttgttcaaaaacagttacgagatagagatcaaagtgaagatatt
ccgaagatttcaactgtctctgagccaactgttgtaaatacagttctaccagtacttctg
cctggttcttactcacacagagagaagtcagattcattttacccacaggaactgccagat
ggacatctaactgaagttgatctgaaggtttcaagcggtcttggtcaagctgaccagatt
tctgggttacctacaggtattcctggtacttattcacacagtgaaaagcaccagcttatc
tcagaacatgtccaagagctgatggataacttgaattcttccgagtcgtcttgtctcagt
gtggatagtatgcctctaaattcacaaatcgatgatggagttatcatatgtaagccagaa
tctttaggttttgccaatgctggctgtgaggaaatgcagaatatagatcgtggttcgaaa
actcttaaggaaattcagactctcttgatggaagcagaaaatatggcactgaaacgatgc
aatttctctgttcccttagtccctttcagagatgttaacgatgtttcatttatacgatca
aagaaggtggtttgcttcaaagaatcctccacaactgatgtttgtacccagagggaatca
tttgtagaagaagttccacacattgaatatgtacagaaggacattggcacacagacgaac
cttaagtaccagaggggtgttggaaattgggaatttatcagttcagctacctttagaagt
cctctacaggaagcagaaggcacagctagaatggcatatgatgaaacttttaggcaatat
aaagctgccaggtctgtaatgaggtctgaacctgaaggctgcagtacaggcattgggaat
aaaatgattatccctatgatgacaatcataaagagtgactcgagtagtgatgtaagtgat
ggttgctgctcatgggacaacaatttaccagagtctttggaatctgtttctgatgttttt
ctaaacttctttccatatacttcacccaagacaagtataacagatagccgagaagaggag
tggttgtcagagagcgaggatggctatggtagtacagattcattggctgcacatgtgaag
taccttctgcagtgtgaaacttcactgaatcaagccaaacagatacttaaaaatgcagag
gaagaggaatatcgggtccgaacccaagcctggaatctaaagtttaatttaggacgtgac
cgtggatactccatttcagaattaaatgaagatgacagaaggaaagtagaagagataaaa
gcaaagttgtttggtcatggaagagcaactcacatgtctgagggcttacgaagtccacaa
ggcataggatgtttgccagaagctgtatgtagtcgaattattattgagagccatgagaaa
ggatgtttcaggactcttactgctgaacaaccacggccagacagctgccattgtgctttt
cgatctgttgaaccttcagacttgattagaggacatcggagcccatcatcatggagaggc
aggcacatcaacctttccagatcaatagaacagagcaatccctgtttcaaagtagggagt
tcctttcagttacagagtcatcccccatttcaaaaacttttacctgatgacatcaaaatt
agcaagggtgttggaatgccagtccatgcatacatggatccccagccatcagaattagta
gaacctacttgtgtgccagctaaagaaatggattttccttcctcatctcaaatactgccc
cctgagcccaagaagcagttcactactgccatcactttttcttctcacgaacactctgag
tgcatttctgattcctctggttgtaaggttggtgttactgcagatagccagtgtagtgga
ccatctttaggggtatttaagcctcatatccccgaagagcagatttctcctagagatctt
aaacagaaaacctctttccagtcatcacttgaaaggcatggttctacaccggtgactatt
ttagctgatggtagtaggcaaaggcaaaaattacctgttgattttgagcattctcatcaa
aaagaaaaactcttacaaagattaggttttaaagtcagccattctgaacccaatgtcagt
acaaatgttagcaatttcaagggagttcaattttctggtaaggataccattgttagccag
gacaaactaacttctacagtagaggtaaaagagaagaatgtaactgtaactcctgatctt
ccttcttgcatttttcttgaacaaccagagctctttgaggaaagccacaccccacataca
gatcttcagatgagaaaatacccttctccctcttgtccagaaattgcttctcgcattttt
cttgagcagccaaaactctctgaacaaagcaaagccccacatgtagatcgtgaaataaga
gaagatcactctttctttcctaagtgccaggattatatagttgcagacccttctcccgat
tttcctgatcagcaacaatgcaaacctccagacgtagttggccacacgagaaaacagaac
tctcttctttctgaaggtcaggattatgagttagaagaggttcagcatatacctcagtca
tacttttctaatatggtaaatgttgaagccaaggtcagtgatgcgatctcccagtcagcc
cctgaccactgtacagctgcatctactccaccttcaaatagaaaagcactttcatgtgtt
cgtataactctttgtcccaagacttcttccaagttggatagtggaaccttaggtgaaagg
tttcattcattggatcctgcttctaaaacaaggattaatagtgagtttaactctgatctg
cgaattatatcttcaaggtcattggaaccaacctccaaattactgacctgtaaaccagta
gcacaggatcaagaatctttagtttttctaggacctaaatctccactggacttgcaagtc
gcacagtcttctcttccagatagtaagactatttttcaggacttgaaaaccaaacctcct
cagaatagccagatagtaacctcaaggcaaacacaagtgaacatttcacatttggaagga
tattccaaaccagaggggactccagtatctgcggatggttcacaagaacagagtaaggtt
tcctttactacgtcctttggaaagttatcatctgatgccatcactcagataacaacagaa
agtccagaaaagaccacattttcatctgaaatttttattcatgcggatgatcgtggacag
ggcattctagaccccatggcccaaaagccatccaggtttgcctcatcatcctcagtgcag
caaatcccagcttctcatggcaaagacgcccagcctgtgctgttaccatataagccatct
ggtagttcgaagatgtattatgttccactgttaaaaagagttccttcatatctggattcc
aaatctgataccactgttgagagctcacattcaggctcaaatgatgctattgccccagac
tttccacctcaaatgctaggcacaagagacgatgacctctccaacactgtaaacattaag
cacaaagaagggatttatagcaagagggctgcaacaaaggggaaaaacccctctcagaaa
ggtgatgcagcggccccagttcaaatgcctataacttgggatgagaatgtcttggacgaa
aaccaagaagaggtcatcagtagaggagttgtgatcaagatggcaggacctgaagaaatg
tcatccctggagaaggaccttgcaggtcccagtgatatcactgtacaagacagaaaaact
gaaaatctgccagacactaaatccattaaacagaaggaaggatccttagagatagaatct
gaatgtcattctgcatttgaaaacactgctcactctgtcttcagatcagccaagttttat
ttccatcatccagtgcacctgccccatgagcaagacttctgccatgaatctttgggaagg
agtgttttcatgcaacattcttggaaggatttctttcaccatcattcaggacacagctgc
cttcctccccctggcccaagttcggacaagttggacaagaccaagatggattacaccaga
attaagagcctcagcatcaacttgaatttgggagagcatgagaaaatacatactatcaag
aatcaggccagagacccaaaaggcaaaagacaagcaaatgagcaaaagaaggatcagaag
gtcaccccagagctaacaactgagtgccccgtgagtttgaatgaactctggaacagatac
caggagcgacagaagcagcagaatccatctggtgcttgtgatacgaaagagctctccttg
gtggaacgacttgatcgcttggctaaactgcttcagaatcccatcacacattcactccgg
gcctcagaaagtgcacaggatgatagcagagggggacatagagccagggagtggactggg
aggaggcaacaaaaacagaaaggcaagcaacacaggaagtggagtaagagcctagagagg
ggccagagtacaggggactttaggaaaagcaaagtgttttctcctcatcaaggtgggaaa
tccagtcagttcaagattgagcagattaaactagataagtacatcctgaggaaagagcca
ggttttaataatgtcagcaatacctccttggattctagaccctcagaggaaagcgtgtct
ctcacagatagtcccaacattttttctagcacggattctcctgtggactcagatgtattg
accccaactgatagggacatgcctttaaatgagaggagcagctccatatccaccattgac
acagtccggttgatccaggcttttggccaagatagactgtctttgtcgcccaggcgaatt
aaattatacagtactgtcactagtcaacggaggagatatctggagcagccatgcaagcac
aacaggaaggcattgaacacagcctgtccccaaatgacttctgagcacagcagaaggagg
cacatccaggtggcaaaccatatgacttcttctgactctgtttcatctcctgggagcttg
ttgagcttggactctgctctttccaatgaggaaactgtacgcatggtgagcaagggtgta
caagctggtaacttggagattgtggctggtgtcaaaaaatacactcaggatgttggggtg
actttcccaactcccagttctagtgaggccagattggaagaggacagtgatgtgacttct
tcgtcagaagaaaaagccaaagagaaaaagtttctttccaattatctgcagaccaaaaac
ttaaggaagaacaagccaaatccctgtgcaggagtctcatggtttgttcctgtggaaagt
ggacaatcaggatctaagaaggaaaacctgcccaagatttacagacctgttatctcctgg
tttgaaccagtaaccaaaaccaaaccctggagggagccactgagggaacaaaactggcag
gcccaatgcatgaacagtcgtgggtccctgggaggcccaggcagggatagtggccaggtt
tctcttcggccatttgtgagagcaactctgcaggaatcacttcagcttcacagacctgat
ttcatctcccactctggggagcgcataaagcgtctgaagttacttgtccaggagaggaag
ctccagagcctgttccagagtgagcgggaggctctgttccactcagcgaggcccctgccc
aggagagtcctcctggctgtccagaagaacaagcctattggaaagaaggaaatgattcag
aggaccagacgaatttatgagcagcttccagaagtgaagaagaagagagaagaggagaag
agaaaatcagaatataaatcctactggctacgtgctcaacactataaaatgaaagtgacc
aatcatctcctggggagaaaagtgccttgggactga
DBGET
integrated database retrieval system
