Mus musculus (house mouse): 237911
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Entry
237911 CDS
T01002
Symbol
Brip1, 3110009N10Rik, 8030460J03Rik, Bach1, FACJ, Fancj, OF
Name
(RefSeq) BRCA1 interacting protein C-terminal helicase 1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03440
Homologous recombination
mmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
237911 (Brip1)
03460 Fanconi anemia pathway
237911 (Brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmu03400
]
237911 (Brip1)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
237911 (Brip1)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
237911 (Brip1)
FA (Fanconi anemia) pathway
Downstream FA components
237911 (Brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
HBB
DUF1866
Motif
Other DBs
NCBI-GeneID:
237911
NCBI-ProteinID:
NP_840094
MGI:
2442836
Ensembl:
ENSMUSG00000034329
UniProt:
Q5SXJ3
LinkDB
All DBs
Position
11:complement(85948957..86092041)
Genome browser
AA seq
1174 aa
AA seq
DB search
MSSVLSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSA
LAWQQSLSEKPVDEGLNKKPEAPPSCSCACHSKNFTYSDTNLDTSPHFNSPSKPSSGRNG
VSTPCQDSPEKNTLAAKLSAKKQASIHRDEDDDFQVEKKRIRPLETTQQIRKRHCLEKDV
HHVDARLASEKRVKPESPIGKSFSDRKDSFQNVDGLCSRCCCSAKQGNNQEPANTVKKDH
GGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEK
CMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARE
LIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRF
ARDELDSLINGNIRKKSHEPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNL
YRMGITTATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYL
FRENSRFADDYKVAIQQTYSWTNQIAIFDKTGVLAVPKNKKHSRQKIGVNALNFWCLNPA
VAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVWVGTVGSGPKG
RNLCATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSL
ESVKTVIAEPQGGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNAR
AVITVGIPFPNVKDLQVELKRQYNDHHSKSRGLLPGRQWYEIQAYRALNQALGRCIRHKN
DWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEFSRRHQKVTNRSKK
DEKCTKDNEPTLEVACLEDSTFTSVSESSHQSPENSTEEAEVCVQELQCPQVATKSPSVA
SHGVSRRKKSDPGLRGESLQTMKTEKNEISRSSSPTFGKQTEPVNWPIFNSLRRHFNSKV
KNCTPVLKSSKNRAPGSSTFNKTALPLTGNCVPSNETADTSLGPCLQSEVIISPVKIEAT
PATNYSKQVFCCEKDLLPDTELSPGTEEAKCPSSNKAAETEVDDDSECFTPELFDPVDTN
EENGELVETDRSSHSSDCFSAEELFETATGFGQK
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagtgttgtctgactacaccatcggtggggtgaagatccactttccctgtaga
gcgtatccagcacagcttgcgatgatgaattctattgtcagaggactaaacagcagccaa
cactgtttgctggagagtcccacaggaagtggaaaaagtttagccttactttgttctgca
ttagcatggcagcaatctcttagtgagaagccagtggatgagggcctgaataaaaagcct
gaggcaccaccttcatgttcttgtgcatgccattcaaagaattttacctacagcgacaca
aacctggacacttcacctcatttcaatagtccaagcaaaccatcttctggaagaaatgga
gtctcaactccctgtcaagactctcctgaaaaaaatactctggctgcaaagttatctgcc
aagaaacaggcatctatacacagagacgaagatgatgattttcaggtagagaagaaaaga
atccgacccttagaaactacacagcagataagaaaacgtcattgtttggaaaaggacgtc
caccatgtagatgcacgactagcttcggaaaagagagtaaagcctgagtctccgatagga
aagtctttctccgacaggaaagactcttttcaaaatgtggatggcctttgttccaggtgc
tgctgttctgctaaacaaggaaacaaccaagagcctgcaaatactgttaagaaagatcac
gggggacaatgcaagagacctaaaatttattttgggacgcggacacacaagcagattgct
cagattaccagggagctccgtaagacagcttactcaggggtcccgatgactattctttcc
agcagggaccacagctgtgtccatcctgaagtggtggggaatttcaacagaaaggagaag
tgcatggagctgctggatggcaagcacgggaagtcctgctatttctatcatggtgttcat
aaaattagtaatcagcagacactgcagcaccttcagggcatgtccagagcctgggacata
gaagaactagtcagcctcgggaggaaactgaaagcttgtccctactatacagctcgagaa
ctgatagaggatgctgacatagtgttttgtccctacaactaccttttagactcacaaata
agggaaactatggatataaagctgaaaggacaagttgtcattttagatgaagctcacaac
attgaagactgtgctcgggaatcagcaagctacagtgtaaccgaagttcagcttaggttt
gctcgggatgagctagatagtttgatcaacggtaacataaggaagaaaagccacgagccc
ctacgagatgtgtgctataacctcatcaattggttagaaacaaattctaagcatcttgta
gaaaggggttatgagtcgtcttgtaaaatatggagtggaaatgagatgctcttaaactta
tacaggatgggcatcaccacggctacttttccagttttgcagaggcatctctcagctgtt
cttcaaaaagaagagaaagtcacaccaatccatggtaaagaggaggcaatacaaatccct
attatcagtgcatcaactcaagtcgtgctcaaaggactctttatggtgcttgactatctc
tttagagaaaatagcagatttgcagatgattataaagttgctattcaacagacttactcc
tggacaaatcagattgctatttttgataaaactggagtcttggctgtaccaaaaaataag
aaacattcacgacagaaaattggagttaatgcgctaaacttttggtgtttaaatccagct
gtggccttttcagatattaatgacaaagtacggaccattgttctaacatcaggaacactc
tcacccctgaaatccttttcatctgagcttggtgtcacatttagcatccaactggaggct
aaccatgtcatcagtaactcacaggtttgggttggtactgttggctcaggccctaagggt
cggaatctctgcgctacctttcagcatactgaaacatttgagttccaggatgaagtggga
atgcttctgttatctgtgtgccagactgtgagccaaggaattctgtgctttttgccatct
tacaagctattagagaaattaagagaacgttggattttcactggcctatggcatagtttg
gagtcagtgaagacagtcattgcagaaccccaaggaggagaaaaaactgattttgatgaa
ttgctgcaagtgtactatgacgccatcaagttcaaaggagaaaaggatggagcccttctc
atagcagtctgtcgtggcaaggtgagcgagggtctggatttctcagatgataacgcccgt
gctgtcataaccgtagggattcctttcccaaatgtgaaggatcttcaggtggagctaaaa
cgacaatacaatgaccaccactcaaaatcgagaggtcttctgcctggccgtcagtggtat
gaaattcaagcataccgagccttgaatcaggctctaggcagatgtattcggcacaaaaat
gattggggagctcttattctagtggacgatcgcttcaataacaatccaaaccgctatata
tcaggactttctaaatgggtgaggcagcagattcagcaccactcaagctttgcaagtgcc
ctggagtcgctgaccgagttctccagaagacaccagaaagttactaatagatccaaaaaa
gacgaaaaatgtacaaaagacaatgagcctactctggaagtggcctgtttggaggatagc
acttttacaagtgtgtcagaatcaagtcatcagtcaccagaaaactcgacagaagaagca
gaagtgtgtgtccaggagcttcagtgtccccaggtggctactaaaagcccctcagtagca
agccacggtgtttccagaaggaagaaaagtgatccaggactaagaggagagtctcttcag
acaatgaaaacagaaaaaaatgagatttcccgatcttcaagcccaacttttggaaagcaa
acagagccagtcaactggcctatctttaattctctaagacggcatttcaatagtaaagta
aaaaattgcacaccagtactcaagtcatcaaagaaccgtgcccctggttcttccactttc
aataaaactgctttgccactcacaggtaactgtgtgccctcaaacgaaacagcagacaca
tcactgggaccttgccttcagtcagaagtcataatttcaccagtgaagattgaagctact
cctgctacgaattattccaaacaggtgttctgctgtgagaaagacctactcccggatact
gaattgtcgccaggaactgaagaagccaagtgtcccagctcaaacaaagctgctgaaaca
gaagtggatgatgactctgagtgttttacacctgaactttttgatcctgtcgataccaac
gaagaaaacggtgaactggttgaaactgatagatcaagtcatagttcagattgtttttca
gcggaagagctttttgaaactgcaactggatttgggcagaagtga
DBGET
integrated database retrieval system
